RNA–Protein interactions for RNA: ENST00000319172.9

TMEM39A-201, Transcript of transmembrane protein 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM39A, Length 4,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-201ENST00000319172 APOBRQ0VD83 1088 aa10.89□□□□□ -0.67
TMEM39A-201ENST00000319172 CFAP45Q9UL16 551 aa10.89□□□□□ -0.67
TMEM39A-201ENST00000319172 CEMIPQ8WUJ3 1361 aa10.89□□□□□ -0.67
TMEM39A-201ENST00000319172 PALLDQ8WX93 1383 aa10.89□□□□□ -0.67
TMEM39A-201ENST00000319172 FAM196AQ6ZSG2 479 aa10.89□□□□□ -0.67
TMEM39A-201ENST00000319172 RUFY3Q7L099 469 aa10.89□□□□□ -0.67
TMEM39A-201ENST00000319172 SEPT12Q8IYM1 358 aa10.89□□□□□ -0.67
TMEM39A-201ENST00000319172 TSPY26PQ9H489 355 aa10.89□□□□□ -0.67
TMEM39A-201ENST00000319172 MPHOSPH10O00566 681 aaKnown RBP10.89□□□□□ -0.67
TMEM39A-201ENST00000319172 GPAA1O43292 621 aa10.89□□□□□ -0.67
TMEM39A-201ENST00000319172 PRC1O43663 620 aa10.89□□□□□ -0.67
TMEM39A-201ENST00000319172 HMGN5P82970 282 aaKnown RBP10.89□□□□□ -0.67
TMEM39A-201ENST00000319172 SMIM5Q71RC9 77 aa10.89□□□□□ -0.67
TMEM39A-201ENST00000319172 ZNF444Q8N0Y2 327 aaPredicted RBP10.89□□□□□ -0.67
TMEM39A-201ENST00000319172 VSIG10Q8N0Z9 540 aa10.89□□□□□ -0.67
TMEM39A-201ENST00000319172 THRAP3Q9Y2W1 955 aaKnown RBP10.89□□□□□ -0.67
TMEM39A-201ENST00000319172 TSPY2A6NKD2 308 aa10.88□□□□□ -0.67
TMEM39A-201ENST00000319172 CAMK4Q16566 473 aa10.88□□□□□ -0.67
TMEM39A-201ENST00000319172 TNMDQ9H2S6 317 aa10.88□□□□□ -0.67
TMEM39A-201ENST00000319172 SRP68Q9UHB9 627 aaKnown RBP10.88□□□□□ -0.67
TMEM39A-201ENST00000319172 H7C1W4 665 aa10.88□□□□□ -0.67
TMEM39A-201ENST00000319172 BAG3O95817 575 aa10.88□□□□□ -0.67
TMEM39A-201ENST00000319172 LDHCP07864 332 aa10.88□□□□□ -0.67
TMEM39A-201ENST00000319172 RPS8P62241 208 aaKnown RBP10.88□□□□□ -0.67
TMEM39A-201ENST00000319172 SPTY2D1Q68D10 685 aaPredicted RBP10.88□□□□□ -0.67
TMEM39A-201ENST00000319172 CRNKL1Q9BZJ0 848 aaKnown RBP10.88□□□□□ -0.67
TMEM39A-201ENST00000319172 HELLSQ9NRZ9 838 aa10.88□□□□□ -0.67
TMEM39A-201ENST00000319172 MAGEB6P1A0A0J9YX57 407 aa10.88□□□□□ -0.67
TMEM39A-201ENST00000319172 RXRAP19793 462 aa10.88□□□□□ -0.67
TMEM39A-201ENST00000319172 HSPA4P34932 840 aa10.88□□□□□ -0.67
TMEM39A-201ENST00000319172 METAP2P50579 478 aaKnown RBP eCLIP10.88□□□□□ -0.67
TMEM39A-201ENST00000319172 APPBP2Q92624 585 aa10.88□□□□□ -0.67
TMEM39A-201ENST00000319172 ZC3H12CQ9C0D7 883 aaKnown RBP10.88□□□□□ -0.67
TMEM39A-201ENST00000319172 ARMT1Q9H993 441 aa10.88□□□□□ -0.67
TMEM39A-201ENST00000319172 PI16Q6UXB8 463 aa10.88□□□□□ -0.67
TMEM39A-201ENST00000319172 CRACR2BQ8N4Y2 399 aaPredicted RBP10.88□□□□□ -0.67
TMEM39A-201ENST00000319172 CTCFLQ8NI51 663 aaPredicted RBP10.88□□□□□ -0.67
TMEM39A-201ENST00000319172 PARP3Q9Y6F1 533 aa10.88□□□□□ -0.67
TMEM39A-201ENST00000319172 GYG1P46976 350 aa10.87□□□□□ -0.67
TMEM39A-201ENST00000319172 DHX32Q7L7V1 743 aaKnown RBP10.87□□□□□ -0.67
TMEM39A-201ENST00000319172 ANKRD2Q9GZV1 360 aa10.87□□□□□ -0.67
TMEM39A-201ENST00000319172 GRPEL1Q9HAV7 217 aa10.87□□□□□ -0.67
TMEM39A-201ENST00000319172 RBM27Q9P2N5 1060 aaKnown RBP10.87□□□□□ -0.67
TMEM39A-201ENST00000319172 CYP19A1P11511 503 aaPredicted RBP10.87□□□□□ -0.67
TMEM39A-201ENST00000319172 HIBADHP31937 336 aaKnown RBP10.87□□□□□ -0.67
TMEM39A-201ENST00000319172 IARSP41252 1262 aaKnown RBP10.87□□□□□ -0.67
TMEM39A-201ENST00000319172 BCAMP50895 628 aa10.87□□□□□ -0.67
TMEM39A-201ENST00000319172 AFF2P51816 1311 aa10.87□□□□□ -0.67
TMEM39A-201ENST00000319172 KIF20BQ96Q89 1820 aa10.87□□□□□ -0.67
TMEM39A-201ENST00000319172 SSH2Q76I76 1423 aa10.87□□□□□ -0.67
TMEM39A-201ENST00000319172 UFL1O94874 794 aa10.87□□□□□ -0.67
TMEM39A-201ENST00000319172 ZSCAN22P10073 491 aaPredicted RBP10.87□□□□□ -0.67
TMEM39A-201ENST00000319172 PHKA1P46020 1223 aa10.87□□□□□ -0.67
TMEM39A-201ENST00000319172 SUSD4Q5VX71 490 aa10.87□□□□□ -0.67
TMEM39A-201ENST00000319172 CCDC102BQ68D86 513 aa10.87□□□□□ -0.67
TMEM39A-201ENST00000319172 MSL1Q68DK7 614 aa10.87□□□□□ -0.67
TMEM39A-201ENST00000319172 JMYQ8N9B5 988 aa10.87□□□□□ -0.67
TMEM39A-201ENST00000319172 TCEAL9Q9UHQ7 104 aa10.87□□□□□ -0.67
TMEM39A-201ENST00000319172 STX8Q9UNK0 236 aa10.87□□□□□ -0.67
TMEM39A-201ENST00000319172 MROH5Q6ZUA9 1318 aa10.87□□□□□ -0.67
TMEM39A-201ENST00000319172 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.87□□□□□ -0.67
TMEM39A-201ENST00000319172 SNAP23O00161 211 aa10.86□□□□□ -0.67
TMEM39A-201ENST00000319172 CD2BP2O95400 341 aaKnown RBP10.86□□□□□ -0.67
TMEM39A-201ENST00000319172 SPATA5Q8NB90 893 aa10.86□□□□□ -0.67
TMEM39A-201ENST00000319172 ZKSCAN3Q9BRR0 538 aa10.86□□□□□ -0.67
TMEM39A-201ENST00000319172 ANTXR1Q9H6X2 564 aa10.86□□□□□ -0.67
TMEM39A-201ENST00000319172 HOOK1Q9UJC3 728 aaKnown RBP10.86□□□□□ -0.67
TMEM39A-201ENST00000319172 CCDC196A0A1B0GTZ2 297 aa10.86□□□□□ -0.67
TMEM39A-201ENST00000319172 ZNF804AQ7Z570 1209 aa10.86□□□□□ -0.67
TMEM39A-201ENST00000319172 RASEFQ8IZ41 740 aa10.86□□□□□ -0.67
TMEM39A-201ENST00000319172 HAUS7Q99871 368 aa10.86□□□□□ -0.67
TMEM39A-201ENST00000319172 SLC26A6Q9BXS9 759 aa10.86□□□□□ -0.67
TMEM39A-201ENST00000319172 ZNF532Q9HCE3 1301 aa10.86□□□□□ -0.67
TMEM39A-201ENST00000319172 PDE8BO95263 885 aa10.86□□□□□ -0.67
TMEM39A-201ENST00000319172 WTAPQ15007 396 aa10.86□□□□□ -0.67
TMEM39A-201ENST00000319172 RAB3GAP1Q15042 981 aa10.86□□□□□ -0.67
TMEM39A-201ENST00000319172 PI4K2BQ8TCG2 481 aa10.86□□□□□ -0.67
TMEM39A-201ENST00000319172 SCAND2PQ9GZW5 306 aaPredicted RBP10.86□□□□□ -0.67
TMEM39A-201ENST00000319172 NUP62CLQ9H1M0 184 aa10.86□□□□□ -0.67
TMEM39A-201ENST00000319172 ZBTB43O43298 467 aa10.86□□□□□ -0.67
TMEM39A-201ENST00000319172 TTLL5Q6EMB2 1281 aa10.86□□□□□ -0.67
TMEM39A-201ENST00000319172 CATIPQ7Z7H3 387 aa10.86□□□□□ -0.67
TMEM39A-201ENST00000319172 TMOD2Q9NZR1 351 aa10.86□□□□□ -0.67
TMEM39A-201ENST00000319172 CNPY2Q9Y2B0 182 aa10.86□□□□□ -0.67
TMEM39A-201ENST00000319172 MEGF6O75095 1541 aa10.85□□□□□ -0.67
TMEM39A-201ENST00000319172 PDE4BQ07343 736 aa10.85□□□□□ -0.67
TMEM39A-201ENST00000319172 MTX1Q13505 466 aa10.85□□□□□ -0.67
TMEM39A-201ENST00000319172 ERFEQ4G0M1 354 aa10.85□□□□□ -0.67
TMEM39A-201ENST00000319172 MARCH10Q8NA82 808 aaPredicted RBP10.85□□□□□ -0.67
TMEM39A-201ENST00000319172 TTLL11Q8NHH1 800 aa10.85□□□□□ -0.67
TMEM39A-201ENST00000319172 ZNF287Q9HBT7 754 aa10.85□□□□□ -0.67
TMEM39A-201ENST00000319172 MCM9Q9NXL9 1143 aa10.85□□□□□ -0.67
TMEM39A-201ENST00000319172 B4E1Z4 1266 aa10.85□□□□□ -0.67
TMEM39A-201ENST00000319172 RPS6KB1P23443 525 aa10.85□□□□□ -0.67
TMEM39A-201ENST00000319172 CHRNDQ07001 517 aa10.85□□□□□ -0.67
TMEM39A-201ENST00000319172 PICALMQ13492 652 aa10.85□□□□□ -0.67
TMEM39A-201ENST00000319172 PDIA6Q15084 440 aa10.85□□□□□ -0.67
TMEM39A-201ENST00000319172 WASF1Q92558 559 aa10.85□□□□□ -0.67
TMEM39A-201ENST00000319172 DCCP43146 1447 aa10.85□□□□□ -0.67
TMEM39A-201ENST00000319172 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 120.8 ms