RNA–Protein interactions for RNA: ENST00000316534.8

NPHP1-201, Transcript of nephrocystin 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP1, Length 3,756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-201ENST00000316534 ADCK5Q3MIX3 580 aa8.63□□□□□ -1.03
NPHP1-201ENST00000316534 FAM196AQ6ZSG2 479 aa8.63□□□□□ -1.03
NPHP1-201ENST00000316534 TNPO1Q92973 898 aaKnown RBP8.63□□□□□ -1.03
NPHP1-201ENST00000316534 SYTL4Q96C24 671 aaPredicted RBP8.63□□□□□ -1.03
NPHP1-201ENST00000316534 CDC5LQ99459 802 aaKnown RBP8.63□□□□□ -1.03
NPHP1-201ENST00000316534 FSD2A1L4K1 749 aa8.63□□□□□ -1.03
NPHP1-201ENST00000316534 PTMSP20962 102 aa8.63□□□□□ -1.03
NPHP1-201ENST00000316534 ADD2P35612 726 aa8.63□□□□□ -1.03
NPHP1-201ENST00000316534 C3orf67Q6ZVT6 689 aa8.63□□□□□ -1.03
NPHP1-201ENST00000316534 FSD1Q9BTV5 496 aa8.63□□□□□ -1.03
NPHP1-201ENST00000316534 DAXXQ9UER7 740 aaPredicted RBP8.63□□□□□ -1.03
NPHP1-201ENST00000316534 FRAT2O75474 233 aaPredicted RBP8.63□□□□□ -1.03
NPHP1-201ENST00000316534 PDIA4P13667 645 aaKnown RBP8.63□□□□□ -1.03
NPHP1-201ENST00000316534 RPS6KB1P23443 525 aa8.63□□□□□ -1.03
NPHP1-201ENST00000316534 NUCB2P80303 420 aa8.63□□□□□ -1.03
NPHP1-201ENST00000316534 TOB2Q14106 344 aaPredicted RBP8.63□□□□□ -1.03
NPHP1-201ENST00000316534 KRT32Q14532 448 aa8.63□□□□□ -1.03
NPHP1-201ENST00000316534 TTF1Q15361 905 aaPredicted RBP8.63□□□□□ -1.03
NPHP1-201ENST00000316534 ERFEQ4G0M1 354 aa8.63□□□□□ -1.03
NPHP1-201ENST00000316534 ARHGEF1Q92888 912 aaKnown RBP8.63□□□□□ -1.03
NPHP1-201ENST00000316534 AKT1S1Q96B36 256 aa8.63□□□□□ -1.03
NPHP1-201ENST00000316534 EDC3Q96F86 508 aaKnown RBP8.63□□□□□ -1.03
NPHP1-201ENST00000316534 NIP7Q9Y221 180 aaKnown RBP eCLIP8.63□□□□□ -1.03
NPHP1-201ENST00000316534 M0R2C6 588 aa8.62□□□□□ -1.03
NPHP1-201ENST00000316534 IFIT1P09914 478 aaKnown RBP8.62□□□□□ -1.03
NPHP1-201ENST00000316534 TMEM87AQ8NBN3 555 aa8.62□□□□□ -1.03
NPHP1-201ENST00000316534 ZSCAN31Q96LW9 406 aaPredicted RBP8.62□□□□□ -1.03
NPHP1-201ENST00000316534 PNPLA7Q6ZV29 1317 aa8.62□□□□□ -1.03
NPHP1-201ENST00000316534 GREB1LQ9C091 1923 aaPredicted RBP8.62□□□□□ -1.03
NPHP1-201ENST00000316534 RTL5Q5HYW3 569 aaPredicted RBP8.62□□□□□ -1.03
NPHP1-201ENST00000316534 CCDC158Q5M9N0 1113 aa8.62□□□□□ -1.03
NPHP1-201ENST00000316534 LDHAL6AQ6ZMR3 332 aa8.62□□□□□ -1.03
NPHP1-201ENST00000316534 SH2B1Q9NRF2 756 aaPredicted RBP8.62□□□□□ -1.03
NPHP1-201ENST00000316534 CCNL1Q9UK58 526 aaPredicted RBP8.62□□□□□ -1.03
NPHP1-201ENST00000316534 BRCA1P38398 1863 aaKnown RBP8.62□□□□□ -1.03
NPHP1-201ENST00000316534 SEMA3EO15041 775 aa8.62□□□□□ -1.03
NPHP1-201ENST00000316534 NEK4P51957 841 aa8.62□□□□□ -1.03
NPHP1-201ENST00000316534 AK2P54819 239 aa8.62□□□□□ -1.03
NPHP1-201ENST00000316534 UBE4AQ14139 1066 aa8.62□□□□□ -1.03
NPHP1-201ENST00000316534 CCDC102BQ68D86 513 aa8.62□□□□□ -1.03
NPHP1-201ENST00000316534 PROM2Q8N271 834 aa8.62□□□□□ -1.03
NPHP1-201ENST00000316534 APPBP2Q92624 585 aa8.62□□□□□ -1.03
NPHP1-201ENST00000316534 SALL1Q9NSC2 1324 aa8.62□□□□□ -1.03
NPHP1-201ENST00000316534 LRRFIP1Q32MZ4 808 aaKnown RBP8.61□□□□□ -1.03
NPHP1-201ENST00000316534 OSBP2Q969R2 916 aa8.61□□□□□ -1.03
NPHP1-201ENST00000316534 LIMCH1Q9UPQ0 1083 aa8.61□□□□□ -1.03
NPHP1-201ENST00000316534 TAF6LQ9Y6J9 622 aa8.61□□□□□ -1.03
NPHP1-201ENST00000316534 CYP21A2P08686 494 aa8.61□□□□□ -1.03
NPHP1-201ENST00000316534 HSPD1P10809 573 aaKnown RBP8.61□□□□□ -1.03
NPHP1-201ENST00000316534 FBXO33Q7Z6M2 555 aa8.61□□□□□ -1.03
NPHP1-201ENST00000316534 QTRT2Q9H974 415 aaKnown RBP8.61□□□□□ -1.03
NPHP1-201ENST00000316534 PSMA5P28066 241 aa8.61□□□□□ -1.03
NPHP1-201ENST00000316534 COL9A3Q14050 684 aaPredicted RBP8.61□□□□□ -1.03
NPHP1-201ENST00000316534 KIAA1211Q6ZU35 1233 aa8.61□□□□□ -1.03
NPHP1-201ENST00000316534 STOX1Q6ZVD7 989 aa8.61□□□□□ -1.03
NPHP1-201ENST00000316534 HOXA10P31260 410 aaPredicted RBP8.6□□□□□ -1.03
NPHP1-201ENST00000316534 ZAP70P43403 619 aa8.6□□□□□ -1.03
NPHP1-201ENST00000316534 METTL24Q5JXM2 366 aa8.6□□□□□ -1.03
NPHP1-201ENST00000316534 NBPF3Q9H094 633 aa8.6□□□□□ -1.03
NPHP1-201ENST00000316534 SEC31BQ9NQW1 1179 aa8.6□□□□□ -1.03
NPHP1-201ENST00000316534 RTCBQ9Y3I0 505 aaKnown RBP8.6□□□□□ -1.03
NPHP1-201ENST00000316534 DDX11L8A8MPP1 907 aa8.6□□□□□ -1.03
NPHP1-201ENST00000316534 GOLIM4O00461 696 aa8.6□□□□□ -1.03
NPHP1-201ENST00000316534 CHGBP05060 677 aa8.6□□□□□ -1.03
NPHP1-201ENST00000316534 HMGB1P09429 215 aaKnown RBP8.6□□□□□ -1.03
NPHP1-201ENST00000316534 ANKRD1Q15327 319 aa8.6□□□□□ -1.03
NPHP1-201ENST00000316534 RNF20Q5VTR2 975 aa8.6□□□□□ -1.03
NPHP1-201ENST00000316534 PRPF40BQ6NWY9 871 aaKnown RBP8.6□□□□□ -1.03
NPHP1-201ENST00000316534 ZGPATQ8N5A5 531 aaKnown RBP8.6□□□□□ -1.03
NPHP1-201ENST00000316534 PIH1D3Q9NQM4 214 aaKnown RBP8.6□□□□□ -1.03
NPHP1-201ENST00000316534 CCDC9Q9Y3X0 531 aaKnown RBP8.6□□□□□ -1.03
NPHP1-201ENST00000316534 HCLS1P14317 486 aaPredicted RBP8.6□□□□□ -1.03
NPHP1-201ENST00000316534 RBM6P78332 1123 aaKnown RBP8.6□□□□□ -1.03
NPHP1-201ENST00000316534 CHRNDQ07001 517 aa8.6□□□□□ -1.03
NPHP1-201ENST00000316534 TTC39AQ5SRH9 613 aa8.6□□□□□ -1.03
NPHP1-201ENST00000316534 ZNF772Q68DY9 489 aaPredicted RBP8.6□□□□□ -1.03
NPHP1-201ENST00000316534 ZSCAN25Q6NSZ9 544 aa8.6□□□□□ -1.03
NPHP1-201ENST00000316534 DDX46Q7L014 1031 aaKnown RBP8.6□□□□□ -1.03
NPHP1-201ENST00000316534 KRT27Q7Z3Y8 459 aa8.6□□□□□ -1.03
NPHP1-201ENST00000316534 SEC62Q99442 399 aaKnown RBP8.6□□□□□ -1.03
NPHP1-201ENST00000316534 SLC5A1P13866 664 aa8.59□□□□□ -1.03
NPHP1-201ENST00000316534 SMARCC2Q8TAQ2 1214 aa8.59□□□□□ -1.03
NPHP1-201ENST00000316534 MTA3Q9BTC8 594 aa8.59□□□□□ -1.03
NPHP1-201ENST00000316534 SLKQ9H2G2 1235 aaPredicted RBP8.59□□□□□ -1.03
NPHP1-201ENST00000316534 MINPP1Q9UNW1 487 aa8.59□□□□□ -1.03
NPHP1-201ENST00000316534 CYP46A1Q9Y6A2 500 aa8.59□□□□□ -1.03
NPHP1-201ENST00000316534 C10orf71Q711Q0 1435 aa8.59□□□□□ -1.03
NPHP1-201ENST00000316534 FGRP09769 529 aa8.59□□□□□ -1.03
NPHP1-201ENST00000316534 GYS1P13807 737 aa8.59□□□□□ -1.03
NPHP1-201ENST00000316534 PHKA1P46020 1223 aa8.59□□□□□ -1.03
NPHP1-201ENST00000316534 BAG4O95429 457 aaKnown RBP8.59□□□□□ -1.04
NPHP1-201ENST00000316534 LARGE1O95461 756 aa8.59□□□□□ -1.04
NPHP1-201ENST00000316534 TCHHQ07283 1943 aa8.58□□□□□ -1.04
NPHP1-201ENST00000316534 RASGRF1Q13972 1273 aa8.58□□□□□ -1.04
NPHP1-201ENST00000316534 SPATA5Q8NB90 893 aa8.58□□□□□ -1.04
NPHP1-201ENST00000316534 PDRG1Q9NUG6 133 aa8.58□□□□□ -1.04
NPHP1-201ENST00000316534 PODXL2Q9NZ53 605 aa8.58□□□□□ -1.04
NPHP1-201ENST00000316534 ANAPC4Q9UJX5 808 aa8.58□□□□□ -1.04
NPHP1-201ENST00000316534 TPCN1Q9ULQ1 816 aa8.58□□□□□ -1.04
NPHP1-201ENST00000316534 CHMP3Q9Y3E7 222 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms