RNA–Protein interactions for RNA: ENST00000316509.10

VAMP2-201, Transcript of vesicle associated membrane protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP2, Length 2,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP2-201ENST00000316509 CNTNAP4Q9C0A0 1308 aa16.54■□□□□ 0.24
VAMP2-201ENST00000316509 BCL9LQ86UU0 1499 aa16.54■□□□□ 0.24
VAMP2-201ENST00000316509 ZAP70P43403 619 aa16.54■□□□□ 0.24
VAMP2-201ENST00000316509 LLPHQ9BRT6 129 aaKnown RBP16.54■□□□□ 0.24
VAMP2-201ENST00000316509 A0A0G2JS52 829 aa16.53■□□□□ 0.24
VAMP2-201ENST00000316509 NTSR2O95665 410 aa16.53■□□□□ 0.24
VAMP2-201ENST00000316509 SLC5A1P13866 664 aa16.53■□□□□ 0.24
VAMP2-201ENST00000316509 UBE3CQ15386 1083 aa16.53■□□□□ 0.24
VAMP2-201ENST00000316509 MPHOSPH8Q99549 860 aa16.53■□□□□ 0.24
VAMP2-201ENST00000316509 AGXT2Q9BYV1 514 aa16.53■□□□□ 0.24
VAMP2-201ENST00000316509 NIP7Q9Y221 180 aaKnown RBP eCLIP16.53■□□□□ 0.24
VAMP2-201ENST00000316509 IGHMBP2P38935 993 aaKnown RBP16.53■□□□□ 0.24
VAMP2-201ENST00000316509 ST3GAL1Q11201 340 aa16.53■□□□□ 0.24
VAMP2-201ENST00000316509 FAM98CQ17RN3 349 aaKnown RBP16.53■□□□□ 0.24
VAMP2-201ENST00000316509 GPT2Q8TD30 523 aa16.53■□□□□ 0.24
VAMP2-201ENST00000316509 OSBP2Q969R2 916 aa16.53■□□□□ 0.24
VAMP2-201ENST00000316509 LARP6Q9BRS8 491 aaKnown RBP16.53■□□□□ 0.24
VAMP2-201ENST00000316509 MTMR6Q9Y217 621 aa16.53■□□□□ 0.24
VAMP2-201ENST00000316509 EXOSC10Q01780 885 aaKnown RBP16.52■□□□□ 0.24
VAMP2-201ENST00000316509 FOXD4L5Q5VV16 416 aaPredicted RBP16.52■□□□□ 0.24
VAMP2-201ENST00000316509 Q6ZUG5 572 aa16.52■□□□□ 0.24
VAMP2-201ENST00000316509 FOXD4L4Q8WXT5 416 aaPredicted RBP16.52■□□□□ 0.24
VAMP2-201ENST00000316509 M0R2C6 588 aa16.51■□□□□ 0.23
VAMP2-201ENST00000316509 WASHC4Q2M389 1173 aa16.51■□□□□ 0.23
VAMP2-201ENST00000316509 ZSCAN23Q3MJ62 389 aa16.51■□□□□ 0.23
VAMP2-201ENST00000316509 LARP1BQ659C4 914 aaKnown RBP16.51■□□□□ 0.23
VAMP2-201ENST00000316509 CAVIN1Q6NZI2 390 aaKnown RBP16.51■□□□□ 0.23
VAMP2-201ENST00000316509 CDC5LQ99459 802 aaKnown RBP16.51■□□□□ 0.23
VAMP2-201ENST00000316509 TAF6LQ9Y6J9 622 aa16.51■□□□□ 0.23
VAMP2-201ENST00000316509 KAT6BQ8WYB5 2073 aa16.51■□□□□ 0.23
VAMP2-201ENST00000316509 ADD2P35612 726 aa16.51■□□□□ 0.23
VAMP2-201ENST00000316509 MCAMP43121 646 aa16.51■□□□□ 0.23
VAMP2-201ENST00000316509 IMMTQ16891 758 aaKnown RBP16.51■□□□□ 0.23
VAMP2-201ENST00000316509 CCDC102BQ68D86 513 aa16.51■□□□□ 0.23
VAMP2-201ENST00000316509 GTF3C6Q969F1 213 aa16.51■□□□□ 0.23
VAMP2-201ENST00000316509 C8orf37Q96NL8 207 aa16.51■□□□□ 0.23
VAMP2-201ENST00000316509 COL5A3P25940 1745 aaPredicted RBP16.5■□□□□ 0.23
VAMP2-201ENST00000316509 E7EWF7 191 aa16.5■□□□□ 0.23
VAMP2-201ENST00000316509 KCNQ2O43526 872 aa16.5■□□□□ 0.23
VAMP2-201ENST00000316509 PFKFB2O60825 505 aa16.5■□□□□ 0.23
VAMP2-201ENST00000316509 CHGBP05060 677 aa16.5■□□□□ 0.23
VAMP2-201ENST00000316509 SCARF1Q14162 830 aa16.5■□□□□ 0.23
VAMP2-201ENST00000316509 NECAB1Q8N987 351 aa16.5■□□□□ 0.23
VAMP2-201ENST00000316509 KIF3AQ9Y496 699 aa16.5■□□□□ 0.23
VAMP2-201ENST00000316509 WDR19Q8NEZ3 1342 aa16.5■□□□□ 0.23
VAMP2-201ENST00000316509 PHF14O94880 888 aa16.5■□□□□ 0.23
VAMP2-201ENST00000316509 HCLS1P14317 486 aaPredicted RBP16.5■□□□□ 0.23
VAMP2-201ENST00000316509 SF3B3Q15393 1217 aaKnown RBP16.5■□□□□ 0.23
VAMP2-201ENST00000316509 SLC10A5Q5PT55 438 aa16.5■□□□□ 0.23
VAMP2-201ENST00000316509 USP48Q86UV5 1035 aa16.5■□□□□ 0.23
VAMP2-201ENST00000316509 ZNF274Q96GC6 653 aaPredicted RBP16.5■□□□□ 0.23
VAMP2-201ENST00000316509 BRPF3Q9ULD4 1205 aa16.5■□□□□ 0.23
VAMP2-201ENST00000316509 ATRNO75882 1429 aa16.5■□□□□ 0.23
VAMP2-201ENST00000316509 LETM1O95202 739 aaPredicted RBP16.49■□□□□ 0.23
VAMP2-201ENST00000316509 FGD1P98174 961 aa16.49■□□□□ 0.23
VAMP2-201ENST00000316509 STOX1Q6ZVD7 989 aa16.49■□□□□ 0.23
VAMP2-201ENST00000316509 GAS2L3Q86XJ1 694 aa16.49■□□□□ 0.23
VAMP2-201ENST00000316509 LAMB2P55268 1798 aa16.49■□□□□ 0.23
VAMP2-201ENST00000316509 EVCP57679 992 aa16.48■□□□□ 0.23
VAMP2-201ENST00000316509 UBE2HP62256 183 aa16.48■□□□□ 0.23
VAMP2-201ENST00000316509 RPS6KA4O75676 772 aa16.48■□□□□ 0.23
VAMP2-201ENST00000316509 HMGN5P82970 282 aaKnown RBP16.48■□□□□ 0.23
VAMP2-201ENST00000316509 LINC00116Q8NCU8 138 aa16.48■□□□□ 0.23
VAMP2-201ENST00000316509 NYXQ9GZU5 481 aa16.48■□□□□ 0.23
VAMP2-201ENST00000316509 USP21Q9UK80 565 aa16.48■□□□□ 0.23
VAMP2-201ENST00000316509 ARAP2Q8WZ64 1704 aa16.47■□□□□ 0.23
VAMP2-201ENST00000316509 BCORQ6W2J9 1755 aa16.47■□□□□ 0.23
VAMP2-201ENST00000316509 SMARCC2Q8TAQ2 1214 aa16.47■□□□□ 0.23
VAMP2-201ENST00000316509 GPAA1O43292 621 aa16.47■□□□□ 0.23
VAMP2-201ENST00000316509 FGAP02671 866 aa16.47■□□□□ 0.23
VAMP2-201ENST00000316509 ALX1Q15699 326 aa16.47■□□□□ 0.23
VAMP2-201ENST00000316509 SLC9C2Q5TAH2 1124 aa16.47■□□□□ 0.23
VAMP2-201ENST00000316509 LRSAM1Q6UWE0 723 aa16.47■□□□□ 0.23
VAMP2-201ENST00000316509 ANP32BQ92688 251 aaKnown RBP16.47■□□□□ 0.23
VAMP2-201ENST00000316509 MYH14Q7Z406 1995 aaKnown RBP16.46■□□□□ 0.23
VAMP2-201ENST00000316509 PHKA1P46020 1223 aa16.46■□□□□ 0.23
VAMP2-201ENST00000316509 MAP3K12Q12852 859 aa16.46■□□□□ 0.23
VAMP2-201ENST00000316509 SPATA5Q8NB90 893 aa16.46■□□□□ 0.23
VAMP2-201ENST00000316509 RGS22Q8NE09 1264 aa16.46■□□□□ 0.23
VAMP2-201ENST00000316509 BRF1Q92994 677 aa16.46■□□□□ 0.23
VAMP2-201ENST00000316509 TCEANC2Q96MN5 208 aa16.46■□□□□ 0.23
VAMP2-201ENST00000316509 PUS7LQ9H0K6 701 aaKnown RBP16.46■□□□□ 0.23
VAMP2-201ENST00000316509 NARFQ9UHQ1 456 aa16.46■□□□□ 0.23
VAMP2-201ENST00000316509 ZMYM6O95789 1325 aa16.46■□□□□ 0.23
VAMP2-201ENST00000316509 ZNF213O14771 459 aa16.45■□□□□ 0.22
VAMP2-201ENST00000316509 SLFNL1Q499Z3 407 aa16.45■□□□□ 0.22
VAMP2-201ENST00000316509 ZSCAN16Q9H4T2 348 aaPredicted RBP16.45■□□□□ 0.22
VAMP2-201ENST00000316509 TMEM63CQ9P1W3 806 aa16.45■□□□□ 0.22
VAMP2-201ENST00000316509 VPS37CA5D8V6 355 aaPredicted RBP16.45■□□□□ 0.22
VAMP2-201ENST00000316509 MCM5P33992 734 aa16.45■□□□□ 0.22
VAMP2-201ENST00000316509 NCOA7Q8NI08 942 aa16.45■□□□□ 0.22
VAMP2-201ENST00000316509 PIH1D3Q9NQM4 214 aaKnown RBP16.45■□□□□ 0.22
VAMP2-201ENST00000316509 SEC31BQ9NQW1 1179 aa16.45■□□□□ 0.22
VAMP2-201ENST00000316509 DDX60Q8IY21 1712 aaKnown RBP16.45■□□□□ 0.22
VAMP2-201ENST00000316509 AKAP11Q9UKA4 1901 aa16.45■□□□□ 0.22
VAMP2-201ENST00000316509 ELP1O95163 1332 aa16.44■□□□□ 0.22
VAMP2-201ENST00000316509 KRT85P78386 507 aa16.44■□□□□ 0.22
VAMP2-201ENST00000316509 COL9A3Q14050 684 aaPredicted RBP16.44■□□□□ 0.22
VAMP2-201ENST00000316509 CNPY2Q9Y2B0 182 aa16.44■□□□□ 0.22
VAMP2-201ENST00000316509 THSD7AQ9UPZ6 1657 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms