RNA–Protein interactions for RNA: ENST00000315571.5

LDLRAD3-201, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAD3, Length 3,798 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-201ENST00000315571 CALR3Q96L12 384 aaKnown RBP13.63□□□□□ -0.23
LDLRAD3-201ENST00000315571 PDRG1Q9NUG6 133 aa13.63□□□□□ -0.23
LDLRAD3-201ENST00000315571 ITGB4P16144 1822 aa13.63□□□□□ -0.23
LDLRAD3-201ENST00000315571 LOC102724428A0A0B4J2F2 783 aa13.63□□□□□ -0.23
LDLRAD3-201ENST00000315571 ATP2B1P20020 1258 aa13.63□□□□□ -0.23
LDLRAD3-201ENST00000315571 SIK1P57059 783 aa13.63□□□□□ -0.23
LDLRAD3-201ENST00000315571 SRLQ86TD4 932 aa13.63□□□□□ -0.23
LDLRAD3-201ENST00000315571 KCPQ6ZWJ8 1503 aa13.62□□□□□ -0.23
LDLRAD3-201ENST00000315571 MX1P20591 662 aa13.62□□□□□ -0.23
LDLRAD3-201ENST00000315571 KCNF1Q9H3M0 494 aa13.62□□□□□ -0.23
LDLRAD3-201ENST00000315571 ANXA1P04083 346 aa13.62□□□□□ -0.23
LDLRAD3-201ENST00000315571 MAP2K1Q02750 393 aaPredicted RBP13.62□□□□□ -0.23
LDLRAD3-201ENST00000315571 CKAP2LQ8IYA6 745 aa13.62□□□□□ -0.23
LDLRAD3-201ENST00000315571 MYL6BP14649 208 aa13.62□□□□□ -0.23
LDLRAD3-201ENST00000315571 RNF217Q8TC41 542 aa13.62□□□□□ -0.23
LDLRAD3-201ENST00000315571 SRRTQ9BXP5 876 aaKnown RBP13.62□□□□□ -0.23
LDLRAD3-201ENST00000315571 NRBP1Q9UHY1 535 aa13.62□□□□□ -0.23
LDLRAD3-201ENST00000315571 DHX8Q14562 1220 aaKnown RBP13.61□□□□□ -0.23
LDLRAD3-201ENST00000315571 DONSONQ9NYP3 566 aa13.61□□□□□ -0.23
LDLRAD3-201ENST00000315571 KIF2AO00139 706 aaPredicted RBP13.61□□□□□ -0.23
LDLRAD3-201ENST00000315571 PNMA6AP0CW24 399 aaPredicted RBP13.61□□□□□ -0.23
LDLRAD3-201ENST00000315571 SKILP12757 684 aa13.61□□□□□ -0.23
LDLRAD3-201ENST00000315571 ATF7IPQ6VMQ6 1270 aa13.61□□□□□ -0.23
LDLRAD3-201ENST00000315571 CLEC17AQ6ZS10 378 aa13.61□□□□□ -0.23
LDLRAD3-201ENST00000315571 LUZP1Q86V48 1076 aa13.61□□□□□ -0.23
LDLRAD3-201ENST00000315571 GOLGA5Q8TBA6 731 aa13.61□□□□□ -0.23
LDLRAD3-201ENST00000315571 API5Q9BZZ5 524 aaKnown RBP13.61□□□□□ -0.23
LDLRAD3-201ENST00000315571 SLC24A3Q9HC58 644 aa13.61□□□□□ -0.23
LDLRAD3-201ENST00000315571 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.61□□□□□ -0.23
LDLRAD3-201ENST00000315571 URI1O94763 535 aaPredicted RBP13.61□□□□□ -0.23
LDLRAD3-201ENST00000315571 ARID4AP29374 1257 aaPredicted RBP13.61□□□□□ -0.23
LDLRAD3-201ENST00000315571 DDX21Q9NR30 783 aaKnown RBP eCLIP13.61□□□□□ -0.23
LDLRAD3-201ENST00000315571 VPS18Q9P253 973 aa13.61□□□□□ -0.23
LDLRAD3-201ENST00000315571 ZNF330Q9Y3S2 320 aaPredicted RBP13.61□□□□□ -0.23
LDLRAD3-201ENST00000315571 BRWD3Q6RI45 1802 aa13.61□□□□□ -0.23
LDLRAD3-201ENST00000315571 FLIIQ13045 1269 aa13.6□□□□□ -0.23
LDLRAD3-201ENST00000315571 MCTP2Q6DN12 878 aa13.6□□□□□ -0.23
LDLRAD3-201ENST00000315571 GBP6Q6ZN66 633 aa13.6□□□□□ -0.23
LDLRAD3-201ENST00000315571 HYPKQ9NX55 129 aa13.6□□□□□ -0.23
LDLRAD3-201ENST00000315571 PAPPAQ13219 1627 aa13.6□□□□□ -0.23
LDLRAD3-201ENST00000315571 G2E3Q7L622 706 aa13.6□□□□□ -0.23
LDLRAD3-201ENST00000315571 CNPY2Q9Y2B0 182 aa13.6□□□□□ -0.23
LDLRAD3-201ENST00000315571 ATP6V1DQ9Y5K8 247 aa13.6□□□□□ -0.23
LDLRAD3-201ENST00000315571 WDR33Q9C0J8 1336 aaKnown RBP13.6□□□□□ -0.23
LDLRAD3-201ENST00000315571 VPS37CA5D8V6 355 aaPredicted RBP13.6□□□□□ -0.23
LDLRAD3-201ENST00000315571 PIP4K2AP48426 406 aaPredicted RBP13.6□□□□□ -0.23
LDLRAD3-201ENST00000315571 CLCN6P51797 869 aa13.6□□□□□ -0.23
LDLRAD3-201ENST00000315571 SMC1AQ14683 1233 aaKnown RBP13.6□□□□□ -0.23
LDLRAD3-201ENST00000315571 CCDC102AQ96A19 550 aa13.6□□□□□ -0.23
LDLRAD3-201ENST00000315571 RBM28Q9NW13 759 aaKnown RBP13.6□□□□□ -0.23
LDLRAD3-201ENST00000315571 PTPRCP08575 1304 aa13.59□□□□□ -0.23
LDLRAD3-201ENST00000315571 TRIM27P14373 513 aa13.59□□□□□ -0.23
LDLRAD3-201ENST00000315571 MAGEA9P43362 315 aa13.59□□□□□ -0.23
LDLRAD3-201ENST00000315571 MCM6Q14566 821 aa13.59□□□□□ -0.23
LDLRAD3-201ENST00000315571 SLC4A9Q96Q91 983 aa13.59□□□□□ -0.23
LDLRAD3-201ENST00000315571 CENPHQ9H3R5 247 aa13.59□□□□□ -0.23
LDLRAD3-201ENST00000315571 CCNL1Q9UK58 526 aaPredicted RBP13.59□□□□□ -0.23
LDLRAD3-201ENST00000315571 SEC31AO94979 1220 aaKnown RBP13.59□□□□□ -0.23
LDLRAD3-201ENST00000315571 A1BGP04217 495 aa13.59□□□□□ -0.23
LDLRAD3-201ENST00000315571 PROSER3Q2NL68 480 aa13.59□□□□□ -0.23
LDLRAD3-201ENST00000315571 ARHGAP45Q92619 1136 aa13.59□□□□□ -0.23
LDLRAD3-201ENST00000315571 NHSQ6T4R5 1651 aa13.59□□□□□ -0.23
LDLRAD3-201ENST00000315571 KIF1CO43896 1103 aaKnown RBP13.59□□□□□ -0.23
LDLRAD3-201ENST00000315571 PHACTR2O75167 634 aa13.59□□□□□ -0.23
LDLRAD3-201ENST00000315571 AIMP1Q12904 312 aaKnown RBP13.59□□□□□ -0.23
LDLRAD3-201ENST00000315571 SNW1Q13573 536 aaKnown RBP13.59□□□□□ -0.23
LDLRAD3-201ENST00000315571 FBXO18Q8NFZ0 1043 aa13.59□□□□□ -0.23
LDLRAD3-201ENST00000315571 PHAXQ9H814 394 aaKnown RBP13.59□□□□□ -0.23
LDLRAD3-201ENST00000315571 RAI14Q9P0K7 980 aa13.59□□□□□ -0.23
LDLRAD3-201ENST00000315571 TMEM57Q8N5G2 664 aa13.58□□□□□ -0.23
LDLRAD3-201ENST00000315571 TMX3Q96JJ7 454 aa13.58□□□□□ -0.23
LDLRAD3-201ENST00000315571 KIF2CQ99661 725 aa13.58□□□□□ -0.24
LDLRAD3-201ENST00000315571 CCDC171Q6TFL3 1326 aa13.58□□□□□ -0.24
LDLRAD3-201ENST00000315571 EIF3CLB5ME19 914 aaKnown RBP13.58□□□□□ -0.24
LDLRAD3-201ENST00000315571 APBA3O96018 575 aa13.58□□□□□ -0.24
LDLRAD3-201ENST00000315571 EIF3CQ99613 913 aaKnown RBP13.58□□□□□ -0.24
LDLRAD3-201ENST00000315571 DDX58O95786 925 aaKnown RBP13.57□□□□□ -0.24
LDLRAD3-201ENST00000315571 CYP19A1P11511 503 aaPredicted RBP13.57□□□□□ -0.24
LDLRAD3-201ENST00000315571 PACS2Q86VP3 889 aa13.57□□□□□ -0.24
LDLRAD3-201ENST00000315571 UBR2Q8IWV8 1755 aa13.57□□□□□ -0.24
LDLRAD3-201ENST00000315571 KCNQ4P56696 695 aa13.57□□□□□ -0.24
LDLRAD3-201ENST00000315571 NUCB1Q02818 461 aa13.57□□□□□ -0.24
LDLRAD3-201ENST00000315571 SEMA3FQ13275 785 aa13.57□□□□□ -0.24
LDLRAD3-201ENST00000315571 ZSCAN25Q6NSZ9 544 aa13.57□□□□□ -0.24
LDLRAD3-201ENST00000315571 SLC4A10Q6U841 1118 aa13.57□□□□□ -0.24
LDLRAD3-201ENST00000315571 UPF3BQ9BZI7 483 aaKnown RBP13.57□□□□□ -0.24
LDLRAD3-201ENST00000315571 ITPK1Q13572 414 aa13.57□□□□□ -0.24
LDLRAD3-201ENST00000315571 ARFGAP3Q9NP61 516 aa13.57□□□□□ -0.24
LDLRAD3-201ENST00000315571 ANO2Q9NQ90 1003 aa13.57□□□□□ -0.24
LDLRAD3-201ENST00000315571 SMC2O95347 1197 aa13.56□□□□□ -0.24
LDLRAD3-201ENST00000315571 ACTN2P35609 894 aa13.56□□□□□ -0.24
LDLRAD3-201ENST00000315571 MUM1L1Q5H9M0 696 aa13.56□□□□□ -0.24
LDLRAD3-201ENST00000315571 PRPF38AQ8NAV1 312 aaKnown RBP13.56□□□□□ -0.24
LDLRAD3-201ENST00000315571 XAGE3Q8WTP9 111 aa13.56□□□□□ -0.24
LDLRAD3-201ENST00000315571 TNMDQ9H2S6 317 aa13.56□□□□□ -0.24
LDLRAD3-201ENST00000315571 PLEKHA4Q9H4M7 779 aa13.56□□□□□ -0.24
LDLRAD3-201ENST00000315571 AK9Q5TCS8 1911 aa13.56□□□□□ -0.24
LDLRAD3-201ENST00000315571 HDAC1Q13547 482 aaPredicted RBP13.56□□□□□ -0.24
LDLRAD3-201ENST00000315571 PDIA6Q15084 440 aa13.56□□□□□ -0.24
LDLRAD3-201ENST00000315571 MAP3K11Q16584 847 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms