RNA–Protein interactions for RNA: ENST00000309422.6

VEGFB-201, Transcript of vascular endothelial growth factor B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFB, Length 1,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-201ENST00000309422 H7C1D1 291 aa24.61■■□□□ 1.53
VEGFB-201ENST00000309422 PSMD14O00487 310 aa24.61■■□□□ 1.53
VEGFB-201ENST00000309422 IFIT1P09914 478 aaKnown RBP24.61■■□□□ 1.53
VEGFB-201ENST00000309422 PTPN12Q05209 780 aaKnown RBP24.61■■□□□ 1.53
VEGFB-201ENST00000309422 LRRC24Q50LG9 513 aa24.61■■□□□ 1.53
VEGFB-201ENST00000309422 CAVIN4Q5BKX8 364 aa24.61■■□□□ 1.53
VEGFB-201ENST00000309422 TAF1DQ9H5J8 278 aaPredicted RBP24.61■■□□□ 1.53
VEGFB-201ENST00000309422 CEP126Q9P2H0 1117 aa24.61■■□□□ 1.53
VEGFB-201ENST00000309422 CLEC11AQ9Y240 323 aa24.61■■□□□ 1.53
VEGFB-201ENST00000309422 USP17L3A6NCW0 530 aa24.6■■□□□ 1.53
VEGFB-201ENST00000309422 USP17L4A6NCW7 530 aa24.6■■□□□ 1.53
VEGFB-201ENST00000309422 PDE8BO95263 885 aa24.6■■□□□ 1.53
VEGFB-201ENST00000309422 SLC5A1P13866 664 aa24.6■■□□□ 1.53
VEGFB-201ENST00000309422 FSTL1Q12841 308 aa24.6■■□□□ 1.53
VEGFB-201ENST00000309422 C15orf52Q6ZUT6 534 aaKnown RBP24.6■■□□□ 1.53
VEGFB-201ENST00000309422 USP17L1Q7RTZ2 530 aa24.6■■□□□ 1.53
VEGFB-201ENST00000309422 COPRSQ9NQ92 184 aa24.6■■□□□ 1.53
VEGFB-201ENST00000309422 MYO3BQ8WXR4 1341 aa24.6■■□□□ 1.53
VEGFB-201ENST00000309422 RFX5P48382 616 aaPredicted RBP24.59■■□□□ 1.53
VEGFB-201ENST00000309422 SCNN1DP51172 638 aa24.59■■□□□ 1.53
VEGFB-201ENST00000309422 OS9Q13438 667 aaPredicted RBP24.59■■□□□ 1.53
VEGFB-201ENST00000309422 LDHDQ86WU2 507 aa24.59■■□□□ 1.53
VEGFB-201ENST00000309422 ADARB2Q9NS39 739 aaKnown RBP24.59■■□□□ 1.53
VEGFB-201ENST00000309422 GPRC5DQ9NZD1 345 aa24.59■■□□□ 1.53
VEGFB-201ENST00000309422 COG6Q9Y2V7 657 aa24.59■■□□□ 1.53
VEGFB-201ENST00000309422 SCN4AP35499 1836 aa24.58■■□□□ 1.53
VEGFB-201ENST00000309422 ZBTB7BO15156 539 aaPredicted RBP24.58■■□□□ 1.53
VEGFB-201ENST00000309422 FRAT2O75474 233 aaPredicted RBP24.58■■□□□ 1.53
VEGFB-201ENST00000309422 C1orf115Q9H7X2 142 aa24.58■■□□□ 1.53
VEGFB-201ENST00000309422 G3BP1Q13283 466 aaKnown RBP eCLIP24.57■■□□□ 1.52
VEGFB-201ENST00000309422 USP50Q70EL3 339 aaPredicted RBP24.57■■□□□ 1.52
VEGFB-201ENST00000309422 DPF2Q92785 391 aa24.57■■□□□ 1.52
VEGFB-201ENST00000309422 KLRK1P26718 216 aa24.56■■□□□ 1.52
VEGFB-201ENST00000309422 HIBADHP31937 336 aaKnown RBP24.56■■□□□ 1.52
VEGFB-201ENST00000309422 STRIP1Q5VSL9 837 aa24.56■■□□□ 1.52
VEGFB-201ENST00000309422 RSBN1LQ6PCB5 846 aaPredicted RBP24.56■■□□□ 1.52
VEGFB-201ENST00000309422 AGBL3Q8NEM8 1001 aa24.56■■□□□ 1.52
VEGFB-201ENST00000309422 CD209Q9NNX6 404 aa24.56■■□□□ 1.52
VEGFB-201ENST00000309422 PA2G4Q9UQ80 394 aaKnown RBP24.56■■□□□ 1.52
VEGFB-201ENST00000309422 POTECB2RU33 542 aa24.55■■□□□ 1.52
VEGFB-201ENST00000309422 HMMRO75330 724 aa24.55■■□□□ 1.52
VEGFB-201ENST00000309422 MICALL2Q8IY33 904 aa24.55■■□□□ 1.52
VEGFB-201ENST00000309422 OGFOD1Q8N543 542 aa24.55■■□□□ 1.52
VEGFB-201ENST00000309422 LPIN2Q92539 896 aa24.55■■□□□ 1.52
VEGFB-201ENST00000309422 AKAP2Q9Y2D5 859 aa24.55■■□□□ 1.52
VEGFB-201ENST00000309422 ZBTB12Q9Y330 459 aaPredicted RBP24.55■■□□□ 1.52
VEGFB-201ENST00000309422 SNAP23O00161 211 aa24.54■■□□□ 1.52
VEGFB-201ENST00000309422 VIL1P09327 827 aaKnown RBP24.54■■□□□ 1.52
VEGFB-201ENST00000309422 TTLL5Q6EMB2 1281 aa24.54■■□□□ 1.52
VEGFB-201ENST00000309422 CHADLQ6NUI6 762 aa24.54■■□□□ 1.52
VEGFB-201ENST00000309422 TXNRD3Q86VQ6 643 aa24.54■■□□□ 1.52
VEGFB-201ENST00000309422 CNOT7Q9UIV1 285 aaKnown RBP24.54■■□□□ 1.52
VEGFB-201ENST00000309422 WTIPA6NIX2 430 aaPredicted RBP24.54■■□□□ 1.52
VEGFB-201ENST00000309422 EPS15P42566 896 aa24.54■■□□□ 1.52
VEGFB-201ENST00000309422 RRP1P56182 461 aaKnown RBP24.54■■□□□ 1.52
VEGFB-201ENST00000309422 ATP2B3Q16720 1220 aa24.54■■□□□ 1.52
VEGFB-201ENST00000309422 HDAC9Q9UKV0 1011 aa24.54■■□□□ 1.52
VEGFB-201ENST00000309422 GTF2IP78347 998 aa24.53■■□□□ 1.52
VEGFB-201ENST00000309422 ATP8B2P98198 1209 aa24.53■■□□□ 1.52
VEGFB-201ENST00000309422 VGLL2Q8N8G2 317 aa24.53■■□□□ 1.52
VEGFB-201ENST00000309422 GNL3LQ9NVN8 582 aaKnown RBP24.53■■□□□ 1.52
VEGFB-201ENST00000309422 PNMA6EA0A0J9YXQ4 647 aa24.52■■□□□ 1.52
VEGFB-201ENST00000309422 ATG9AQ7Z3C6 839 aa24.52■■□□□ 1.52
VEGFB-201ENST00000309422 A0A1B0GUL6 1792 aa24.51■■□□□ 1.51
VEGFB-201ENST00000309422 ZNF609O15014 1411 aa24.51■■□□□ 1.51
VEGFB-201ENST00000309422 USP17L8P0C7I0 530 aa24.51■■□□□ 1.51
VEGFB-201ENST00000309422 IL1R1P14778 569 aa24.51■■□□□ 1.51
VEGFB-201ENST00000309422 GYG1P46976 350 aa24.51■■□□□ 1.51
VEGFB-201ENST00000309422 MMP14P50281 582 aa24.51■■□□□ 1.51
VEGFB-201ENST00000309422 KCNQ5Q9NR82 932 aa24.51■■□□□ 1.51
VEGFB-201ENST00000309422 SURF6O75683 361 aaKnown RBP24.5■■□□□ 1.51
VEGFB-201ENST00000309422 CEP85Q6P2H3 762 aa24.5■■□□□ 1.51
VEGFB-201ENST00000309422 HSP90AB4PQ58FF6 505 aa24.49■■□□□ 1.51
VEGFB-201ENST00000309422 DACT2Q5SW24 774 aa24.49■■□□□ 1.51
VEGFB-201ENST00000309422 RPAP2Q8IXW5 612 aaPredicted RBP24.49■■□□□ 1.51
VEGFB-201ENST00000309422 SSH3Q8TE77 659 aa24.49■■□□□ 1.51
VEGFB-201ENST00000309422 GORABQ5T7V8 394 aa24.48■■□□□ 1.51
VEGFB-201ENST00000309422 ERC1Q8IUD2 1116 aa24.48■■□□□ 1.51
VEGFB-201ENST00000309422 FAM84BQ96KN1 310 aaPredicted RBP24.48■■□□□ 1.51
VEGFB-201ENST00000309422 IRS2Q9Y4H2 1338 aa24.48■■□□□ 1.51
VEGFB-201ENST00000309422 SASH1O94885 1247 aa24.47■■□□□ 1.51
VEGFB-201ENST00000309422 POLA2Q14181 598 aa24.47■■□□□ 1.51
VEGFB-201ENST00000309422 KIF4BQ2VIQ3 1234 aa24.47■■□□□ 1.51
VEGFB-201ENST00000309422 ZBTB40Q9NUA8 1239 aa24.47■■□□□ 1.51
VEGFB-201ENST00000309422 HSPA6P17066 643 aa24.46■■□□□ 1.51
VEGFB-201ENST00000309422 FGFR2P21802 821 aa24.46■■□□□ 1.51
VEGFB-201ENST00000309422 TBC1D10BQ4KMP7 808 aaPredicted RBP24.46■■□□□ 1.51
VEGFB-201ENST00000309422 RBM26Q5T8P6 1007 aaKnown RBP24.46■■□□□ 1.51
VEGFB-201ENST00000309422 C20orf194Q5TEA3 1177 aa24.46■■□□□ 1.51
VEGFB-201ENST00000309422 ZC3H15Q8WU90 426 aaKnown RBP24.46■■□□□ 1.51
VEGFB-201ENST00000309422 TBC1D22AQ8WUA7 517 aa24.46■■□□□ 1.51
VEGFB-201ENST00000309422 POTEIP0CG38 1075 aa24.45■■□□□ 1.5
VEGFB-201ENST00000309422 POTEJP0CG39 1038 aa24.45■■□□□ 1.5
VEGFB-201ENST00000309422 FKBP1AP62942 108 aaKnown RBP24.45■■□□□ 1.5
VEGFB-201ENST00000309422 TFCP2Q12800 502 aa24.45■■□□□ 1.5
VEGFB-201ENST00000309422 CHAF1AQ13111 956 aaPredicted RBP24.45■■□□□ 1.5
VEGFB-201ENST00000309422 TDRD7Q8NHU6 1098 aaKnown RBP24.45■■□□□ 1.5
VEGFB-201ENST00000309422 NEUROD6Q96NK8 337 aa24.45■■□□□ 1.5
VEGFB-201ENST00000309422 MFSD14BQ5SR56 506 aa24.44■■□□□ 1.5
VEGFB-201ENST00000309422 FBXO33Q7Z6M2 555 aa24.44■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms