RNA–Protein interactions for RNA: ENST00000306329.15

MTCL1-201, Transcript of microtubule crosslinking factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MTCL1, Length 5,718 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTCL1-201ENST00000306329 STMN4Q9H169 189 aaPredicted RBP23.22■■□□□ 1.31
MTCL1-201ENST00000306329 ANKRD44Q8N8A2 993 aa23.22■■□□□ 1.31
MTCL1-201ENST00000306329 CCDC63Q8NA47 563 aa23.22■■□□□ 1.31
MTCL1-201ENST00000306329 LMBR1Q8WVP7 490 aa23.22■■□□□ 1.31
MTCL1-201ENST00000306329 DISP3Q9P2K9 1392 aa23.21■■□□□ 1.31
MTCL1-201ENST00000306329 ST5P78524 1137 aa23.21■■□□□ 1.31
MTCL1-201ENST00000306329 NAA16Q6N069 864 aaPredicted RBP23.21■■□□□ 1.31
MTCL1-201ENST00000306329 CCDC129Q6ZRS4 1044 aa23.21■■□□□ 1.31
MTCL1-201ENST00000306329 ZKSCAN5Q9Y2L8 839 aa23.21■■□□□ 1.31
MTCL1-201ENST00000306329 NCOA1Q15788 1441 aa23.21■■□□□ 1.31
MTCL1-201ENST00000306329 CALM1P0DP23 149 aa23.21■■□□□ 1.31
MTCL1-201ENST00000306329 CALM2P0DP24 149 aa23.21■■□□□ 1.31
MTCL1-201ENST00000306329 CALM3P0DP25 149 aa23.21■■□□□ 1.31
MTCL1-201ENST00000306329 PICALMQ13492 652 aa23.21■■□□□ 1.31
MTCL1-201ENST00000306329 OTUD6BQ8N6M0 293 aa23.21■■□□□ 1.31
MTCL1-201ENST00000306329 CCDC42Q96M95 316 aa23.21■■□□□ 1.31
MTCL1-201ENST00000306329 FBLN1P23142 703 aa23.21■■□□□ 1.31
MTCL1-201ENST00000306329 NOS1P29475 1434 aa23.21■■□□□ 1.31
MTCL1-201ENST00000306329 STX17P56962 302 aa23.21■■□□□ 1.31
MTCL1-201ENST00000306329 CHRNA2Q15822 529 aa23.21■■□□□ 1.31
MTCL1-201ENST00000306329 LMBR1LQ6UX01 489 aa23.21■■□□□ 1.31
MTCL1-201ENST00000306329 LRRC45Q96CN5 670 aa23.21■■□□□ 1.31
MTCL1-201ENST00000306329 COPS6Q7L5N1 327 aa23.2■■□□□ 1.31
MTCL1-201ENST00000306329 C16orf71Q8IYS4 520 aaPredicted RBP23.2■■□□□ 1.31
MTCL1-201ENST00000306329 SMARCC2Q8TAQ2 1214 aa23.2■■□□□ 1.31
MTCL1-201ENST00000306329 GUCA1BQ9UMX6 200 aa23.2■■□□□ 1.31
MTCL1-201ENST00000306329 CAPN2P17655 700 aa23.2■■□□□ 1.3
MTCL1-201ENST00000306329 PRIM1P49642 420 aaKnown RBP23.2■■□□□ 1.3
MTCL1-201ENST00000306329 ZBTB16Q05516 673 aa23.2■■□□□ 1.3
MTCL1-201ENST00000306329 ANKRD36BQ8N2N9 1353 aa23.2■■□□□ 1.3
MTCL1-201ENST00000306329 ABCC5O15440 1437 aa23.2■■□□□ 1.3
MTCL1-201ENST00000306329 ACEP12821 1306 aa23.2■■□□□ 1.3
MTCL1-201ENST00000306329 ATP2A1O14983 1001 aa23.2■■□□□ 1.3
MTCL1-201ENST00000306329 IDI1Q13907 227 aa23.2■■□□□ 1.3
MTCL1-201ENST00000306329 CCDC50Q8IVM0 306 aa23.2■■□□□ 1.3
MTCL1-201ENST00000306329 UBXN1Q04323 297 aa23.2■■□□□ 1.3
MTCL1-201ENST00000306329 ANKS4BQ8N8V4 417 aa23.2■■□□□ 1.3
MTCL1-201ENST00000306329 GRM8O00222 908 aa23.19■■□□□ 1.3
MTCL1-201ENST00000306329 ATP8B2P98198 1209 aa23.19■■□□□ 1.3
MTCL1-201ENST00000306329 RAB3IL1Q8TBN0 382 aa23.19■■□□□ 1.3
MTCL1-201ENST00000306329 LZTFL1Q9NQ48 299 aa23.19■■□□□ 1.3
MTCL1-201ENST00000306329 SMIM23A6NLE4 172 aa23.19■■□□□ 1.3
MTCL1-201ENST00000306329 PLCB3Q01970 1234 aa23.19■■□□□ 1.3
MTCL1-201ENST00000306329 IMPG2Q9BZV3 1241 aa23.19■■□□□ 1.3
MTCL1-201ENST00000306329 NESP48681 1621 aa23.19■■□□□ 1.3
MTCL1-201ENST00000306329 TRAF1Q13077 416 aa23.19■■□□□ 1.3
MTCL1-201ENST00000306329 ZGPATQ8N5A5 531 aaKnown RBP23.19■■□□□ 1.3
MTCL1-201ENST00000306329 CHST3Q7LGC8 479 aa23.18■■□□□ 1.3
MTCL1-201ENST00000306329 C6orf50Q9HD87 102 aa23.18■■□□□ 1.3
MTCL1-201ENST00000306329 CCDC121Q6ZUS5 278 aa23.18■■□□□ 1.3
MTCL1-201ENST00000306329 SMC6Q96SB8 1091 aa23.18■■□□□ 1.3
MTCL1-201ENST00000306329 MAGI1Q96QZ7 1491 aaPredicted RBP23.18■■□□□ 1.3
MTCL1-201ENST00000306329 MRPS9P82933 396 aaKnown RBP23.18■■□□□ 1.3
MTCL1-201ENST00000306329 PAG1Q9NWQ8 432 aa23.18■■□□□ 1.3
MTCL1-201ENST00000306329 IL15P40933 162 aaPredicted RBP23.18■■□□□ 1.3
MTCL1-201ENST00000306329 MICALL1Q8N3F8 863 aa23.18■■□□□ 1.3
MTCL1-201ENST00000306329 TTC14Q96N46 770 aa23.18■■□□□ 1.3
MTCL1-201ENST00000306329 TCHPQ9BT92 498 aa23.18■■□□□ 1.3
MTCL1-201ENST00000306329 NEK11Q8NG66 645 aa23.17■■□□□ 1.3
MTCL1-201ENST00000306329 PA2G4Q9UQ80 394 aaKnown RBP23.17■■□□□ 1.3
MTCL1-201ENST00000306329 TUBB4AP04350 444 aa23.17■■□□□ 1.3
MTCL1-201ENST00000306329 ZNF569Q5MCW4 686 aa23.17■■□□□ 1.3
MTCL1-201ENST00000306329 CCDC160A6NGH7 325 aa23.17■■□□□ 1.3
MTCL1-201ENST00000306329 GTF2A1P52655 376 aaPredicted RBP23.17■■□□□ 1.3
MTCL1-201ENST00000306329 KRT79Q5XKE5 535 aa23.17■■□□□ 1.3
MTCL1-201ENST00000306329 SNX21Q969T3 373 aa23.17■■□□□ 1.3
MTCL1-201ENST00000306329 VPS18Q9P253 973 aa23.17■■□□□ 1.3
MTCL1-201ENST00000306329 DPH6Q7L8W6 267 aa23.17■■□□□ 1.3
MTCL1-201ENST00000306329 MRPL50Q8N5N7 158 aaKnown RBP23.16■■□□□ 1.3
MTCL1-201ENST00000306329 IFT81Q8WYA0 676 aa23.16■■□□□ 1.3
MTCL1-201ENST00000306329 ALDH1L1O75891 902 aa23.16■■□□□ 1.3
MTCL1-201ENST00000306329 RHOXF2BP0C7M4 288 aa23.16■■□□□ 1.3
MTCL1-201ENST00000306329 KRT2P35908 639 aa23.16■■□□□ 1.3
MTCL1-201ENST00000306329 APOBRQ0VD83 1088 aa23.16■■□□□ 1.3
MTCL1-201ENST00000306329 RHOXF2Q9BQY4 288 aa23.16■■□□□ 1.3
MTCL1-201ENST00000306329 IFNKQ9P0W0 207 aa23.16■■□□□ 1.3
MTCL1-201ENST00000306329 SLC39A6Q13433 755 aa23.16■■□□□ 1.3
MTCL1-201ENST00000306329 MAGEB6P1A0A0J9YX57 407 aa23.16■■□□□ 1.3
MTCL1-201ENST00000306329 BICDL2A1A5D9 508 aa23.16■■□□□ 1.3
MTCL1-201ENST00000306329 AK2P54819 239 aa23.16■■□□□ 1.3
MTCL1-201ENST00000306329 DNAJC21Q5F1R6 531 aaKnown RBP23.16■■□□□ 1.3
MTCL1-201ENST00000306329 FAM13AO94988 1023 aa23.15■■□□□ 1.3
MTCL1-201ENST00000306329 TNNI2P48788 182 aa23.15■■□□□ 1.3
MTCL1-201ENST00000306329 PTPN23Q9H3S7 1636 aa23.15■■□□□ 1.3
MTCL1-201ENST00000306329 NDC80O14777 642 aa23.15■■□□□ 1.3
MTCL1-201ENST00000306329 CA8P35219 290 aa23.15■■□□□ 1.3
MTCL1-201ENST00000306329 SYT10Q6XYQ8 523 aa23.15■■□□□ 1.3
MTCL1-201ENST00000306329 TOPBP1Q92547 1522 aa23.15■■□□□ 1.3
MTCL1-201ENST00000306329 RTL9Q8NET4 1388 aa23.15■■□□□ 1.3
MTCL1-201ENST00000306329 ZEB2O60315 1214 aa23.15■■□□□ 1.3
MTCL1-201ENST00000306329 MCM7P33993 719 aa23.15■■□□□ 1.3
MTCL1-201ENST00000306329 C8orf58Q8NAV2 365 aa23.14■■□□□ 1.3
MTCL1-201ENST00000306329 CALML3P27482 149 aa23.14■■□□□ 1.3
MTCL1-201ENST00000306329 PPP1R9BQ96SB3 815 aa23.14■■□□□ 1.3
MTCL1-201ENST00000306329 KSR2Q6VAB6 950 aa23.14■■□□□ 1.29
MTCL1-201ENST00000306329 FAM212AQ96EL1 285 aa23.14■■□□□ 1.29
MTCL1-201ENST00000306329 CD109Q6YHK3 1445 aa23.14■■□□□ 1.29
MTCL1-201ENST00000306329 TLDC2A0PJX2 215 aa23.14■■□□□ 1.29
MTCL1-201ENST00000306329 RRP36Q96EU6 259 aaKnown RBP23.14■■□□□ 1.29
MTCL1-201ENST00000306329 PSMC4P43686 418 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms