RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 ANKRD18AQ8IVF6 992 aa26.74■■□□□ 1.87
SMAD1-201ENST00000302085 UQCRFS1P1P0C7P4 283 aa26.73■■□□□ 1.87
SMAD1-201ENST00000302085 CCDC24Q8N4L8 307 aa26.73■■□□□ 1.87
SMAD1-201ENST00000302085 ZGPATQ8N5A5 531 aaKnown RBP26.73■■□□□ 1.87
SMAD1-201ENST00000302085 CUL4AQ13619 759 aa26.73■■□□□ 1.87
SMAD1-201ENST00000302085 RNF20Q5VTR2 975 aa26.73■■□□□ 1.87
SMAD1-201ENST00000302085 PROM2Q8N271 834 aa26.73■■□□□ 1.87
SMAD1-201ENST00000302085 NLRP3Q96P20 1036 aa26.73■■□□□ 1.87
SMAD1-201ENST00000302085 TAF6LQ9Y6J9 622 aa26.73■■□□□ 1.87
SMAD1-201ENST00000302085 ARAP2Q8WZ64 1704 aa26.72■■□□□ 1.87
SMAD1-201ENST00000302085 NFIXQ14938 502 aa26.72■■□□□ 1.87
SMAD1-201ENST00000302085 RAB3GAP1Q15042 981 aa26.72■■□□□ 1.87
SMAD1-201ENST00000302085 TSGA10IPQ3SY00 556 aa26.72■■□□□ 1.87
SMAD1-201ENST00000302085 CASZ1Q86V15 1759 aa26.71■■□□□ 1.87
SMAD1-201ENST00000302085 CYP2E1P05181 493 aaPredicted RBP26.71■■□□□ 1.87
SMAD1-201ENST00000302085 LRRFIP1Q32MZ4 808 aaKnown RBP26.71■■□□□ 1.87
SMAD1-201ENST00000302085 OSBP2Q969R2 916 aa26.71■■□□□ 1.87
SMAD1-201ENST00000302085 CWC22Q9HCG8 908 aaKnown RBP26.71■■□□□ 1.87
SMAD1-201ENST00000302085 BSDC1Q9NW68 430 aaPredicted RBP26.71■■□□□ 1.87
SMAD1-201ENST00000302085 U3KPZ7 1027 aaPredicted RBP26.71■■□□□ 1.87
SMAD1-201ENST00000302085 MAST3O60307 1309 aa26.71■■□□□ 1.87
SMAD1-201ENST00000302085 ZFYP08048 801 aaPredicted RBP26.71■■□□□ 1.87
SMAD1-201ENST00000302085 AK2P54819 239 aa26.71■■□□□ 1.87
SMAD1-201ENST00000302085 CELF1Q92879 486 aaKnown RBP26.71■■□□□ 1.87
SMAD1-201ENST00000302085 HMG20BQ9P0W2 317 aa26.71■■□□□ 1.87
SMAD1-201ENST00000302085 TAF1P21675 1872 aa26.7■■□□□ 1.87
SMAD1-201ENST00000302085 M0R2C6 588 aa26.7■■□□□ 1.86
SMAD1-201ENST00000302085 PIH1D3Q9NQM4 214 aaKnown RBP26.7■■□□□ 1.86
SMAD1-201ENST00000302085 CYP46A1Q9Y6A2 500 aa26.7■■□□□ 1.86
SMAD1-201ENST00000302085 UBR3Q6ZT12 1888 aa26.7■■□□□ 1.86
SMAD1-201ENST00000302085 VPS53Q5VIR6 699 aa26.69■■□□□ 1.86
SMAD1-201ENST00000302085 RUFY3Q7L099 469 aa26.69■■□□□ 1.86
SMAD1-201ENST00000302085 PDRG1Q9NUG6 133 aa26.69■■□□□ 1.86
SMAD1-201ENST00000302085 RPAP1Q9BWH6 1393 aaPredicted RBP26.69■■□□□ 1.86
SMAD1-201ENST00000302085 TXNRD1Q16881 649 aa26.69■■□□□ 1.86
SMAD1-201ENST00000302085 TNPO1Q92973 898 aaKnown RBP26.69■■□□□ 1.86
SMAD1-201ENST00000302085 COL9A3Q14050 684 aaPredicted RBP26.68■■□□□ 1.86
SMAD1-201ENST00000302085 TTF1Q15361 905 aaPredicted RBP26.68■■□□□ 1.86
SMAD1-201ENST00000302085 DSCC1Q9BVC3 393 aa26.68■■□□□ 1.86
SMAD1-201ENST00000302085 MINPP1Q9UNW1 487 aa26.68■■□□□ 1.86
SMAD1-201ENST00000302085 PSMA5P28066 241 aa26.67■■□□□ 1.86
SMAD1-201ENST00000302085 TM4SF1P30408 202 aa26.67■■□□□ 1.86
SMAD1-201ENST00000302085 BCAMP50895 628 aa26.67■■□□□ 1.86
SMAD1-201ENST00000302085 RPS8P62241 208 aaKnown RBP26.67■■□□□ 1.86
SMAD1-201ENST00000302085 CARMIL3Q8ND23 1372 aa26.67■■□□□ 1.86
SMAD1-201ENST00000302085 HSPD1P10809 573 aaKnown RBP26.66■■□□□ 1.86
SMAD1-201ENST00000302085 GYS1P13807 737 aa26.66■■□□□ 1.86
SMAD1-201ENST00000302085 WASHC4Q2M389 1173 aa26.66■■□□□ 1.86
SMAD1-201ENST00000302085 SPATA5Q8NB90 893 aa26.66■■□□□ 1.86
SMAD1-201ENST00000302085 LARP6Q9BRS8 491 aaKnown RBP26.66■■□□□ 1.86
SMAD1-201ENST00000302085 LIMCH1Q9UPQ0 1083 aa26.66■■□□□ 1.86
SMAD1-201ENST00000302085 MCM4P33991 863 aa26.66■■□□□ 1.86
SMAD1-201ENST00000302085 RASGRF1Q13972 1273 aa26.66■■□□□ 1.86
SMAD1-201ENST00000302085 APPBP2Q92624 585 aa26.66■■□□□ 1.86
SMAD1-201ENST00000302085 INTS4Q96HW7 963 aaKnown RBP26.66■■□□□ 1.86
SMAD1-201ENST00000302085 DDX24Q9GZR7 859 aaKnown RBP eCLIP26.66■■□□□ 1.86
SMAD1-201ENST00000302085 WTIPA6NIX2 430 aaPredicted RBP26.65■■□□□ 1.86
SMAD1-201ENST00000302085 CYP21A2P08686 494 aa26.65■■□□□ 1.86
SMAD1-201ENST00000302085 PUS7LQ9H0K6 701 aaKnown RBP26.64■■□□□ 1.86
SMAD1-201ENST00000302085 RXRBP28702 533 aa26.64■■□□□ 1.85
SMAD1-201ENST00000302085 ADD2P35612 726 aa26.64■■□□□ 1.85
SMAD1-201ENST00000302085 UBE4AQ14139 1066 aa26.63■■□□□ 1.85
SMAD1-201ENST00000302085 KRT32Q14532 448 aa26.63■■□□□ 1.85
SMAD1-201ENST00000302085 ZSCAN25Q6NSZ9 544 aa26.63■■□□□ 1.85
SMAD1-201ENST00000302085 NPHP1O15259 732 aa26.62■■□□□ 1.85
SMAD1-201ENST00000302085 NUCB2P80303 420 aa26.62■■□□□ 1.85
SMAD1-201ENST00000302085 SLC9C2Q5TAH2 1124 aa26.62■■□□□ 1.85
SMAD1-201ENST00000302085 BLOC1S2Q6QNY1 142 aa26.62■■□□□ 1.85
SMAD1-201ENST00000302085 MYH7P12883 1935 aa26.62■■□□□ 1.85
SMAD1-201ENST00000302085 IDH1O75874 414 aaKnown RBP26.62■■□□□ 1.85
SMAD1-201ENST00000302085 RPS6KB1P23443 525 aa26.62■■□□□ 1.85
SMAD1-201ENST00000302085 CNBD1Q8NA66 436 aa26.62■■□□□ 1.85
SMAD1-201ENST00000302085 A0A1B0GUL6 1792 aa26.61■■□□□ 1.85
SMAD1-201ENST00000302085 PLSCR1O15162 318 aa26.61■■□□□ 1.85
SMAD1-201ENST00000302085 FOXP2O15409 715 aa26.61■■□□□ 1.85
SMAD1-201ENST00000302085 PKP1Q13835 747 aa26.61■■□□□ 1.85
SMAD1-201ENST00000302085 ALDH8A1Q9H2A2 487 aaPredicted RBP26.61■■□□□ 1.85
SMAD1-201ENST00000302085 TNRC6CQ9HCJ0 1690 aaKnown RBP26.6■■□□□ 1.85
SMAD1-201ENST00000302085 UBE3CQ15386 1083 aa26.6■■□□□ 1.85
SMAD1-201ENST00000302085 MYO5AQ9Y4I1 1855 aaKnown RBP26.6■■□□□ 1.85
SMAD1-201ENST00000302085 APBA3O96018 575 aa26.6■■□□□ 1.85
SMAD1-201ENST00000302085 PRR5LQ6MZQ0 368 aa26.6■■□□□ 1.85
SMAD1-201ENST00000302085 WWC3Q9ULE0 1092 aa26.6■■□□□ 1.85
SMAD1-201ENST00000302085 A0A0G2JLW4 131 aa26.59■■□□□ 1.85
SMAD1-201ENST00000302085 LARGE1O95461 756 aa26.59■■□□□ 1.85
SMAD1-201ENST00000302085 PDE6AP16499 860 aa26.59■■□□□ 1.85
SMAD1-201ENST00000302085 STOX1Q6ZVD7 989 aa26.59■■□□□ 1.85
SMAD1-201ENST00000302085 NEK1Q96PY6 1258 aa26.59■■□□□ 1.85
SMAD1-201ENST00000302085 TCRBV5S4A2TA0A5A2 114 aa26.58■■□□□ 1.85
SMAD1-201ENST00000302085 GYG1P46976 350 aa26.58■■□□□ 1.85
SMAD1-201ENST00000302085 TCEANC2Q96MN5 208 aa26.58■■□□□ 1.85
SMAD1-201ENST00000302085 ZDHHC9Q9Y397 364 aa26.58■■□□□ 1.85
SMAD1-201ENST00000302085 ZNF804BA4D1E1 1349 aa26.58■■□□□ 1.85
SMAD1-201ENST00000302085 ZNF532Q9HCE3 1301 aa26.58■■□□□ 1.85
SMAD1-201ENST00000302085 HMGB2P26583 209 aaKnown RBP26.58■■□□□ 1.85
SMAD1-201ENST00000302085 ZSCAN31Q96LW9 406 aaPredicted RBP26.58■■□□□ 1.85
SMAD1-201ENST00000302085 GPAA1O43292 621 aa26.57■■□□□ 1.84
SMAD1-201ENST00000302085 SERPINB2P05120 415 aa26.57■■□□□ 1.84
SMAD1-201ENST00000302085 TTLL5Q6EMB2 1281 aa26.57■■□□□ 1.84
SMAD1-201ENST00000302085 CLEC17AQ6ZS10 378 aa26.57■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 123.3 ms