RNA–Protein interactions for RNA: ENST00000301732.9

ABCA3-201, Transcript of ATP binding cassette subfamily A member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA3, Length 6,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-201ENST00000301732 TTC19Q6DKK2 380 aaPredicted RBP14.01□□□□□ -0.17
ABCA3-201ENST00000301732 MRPS27Q92552 414 aaKnown RBP14.01□□□□□ -0.17
ABCA3-201ENST00000301732 AK2P54819 239 aa14.01□□□□□ -0.17
ABCA3-201ENST00000301732 TSPY3P0CV98 308 aa14.01□□□□□ -0.17
ABCA3-201ENST00000301732 TSPY8P0CW00 308 aa14.01□□□□□ -0.17
ABCA3-201ENST00000301732 CTNND2Q9UQB3 1225 aa14.01□□□□□ -0.17
ABCA3-201ENST00000301732 ZBTB43O43298 467 aa14□□□□□ -0.17
ABCA3-201ENST00000301732 IVLP07476 585 aa14□□□□□ -0.17
ABCA3-201ENST00000301732 NMIQ13287 307 aaPredicted RBP14□□□□□ -0.17
ABCA3-201ENST00000301732 CCDC122Q5T0U0 273 aa14□□□□□ -0.17
ABCA3-201ENST00000301732 ACSBG1Q96GR2 724 aa14□□□□□ -0.17
ABCA3-201ENST00000301732 TCHPQ9BT92 498 aa14□□□□□ -0.17
ABCA3-201ENST00000301732 CHPF2Q9P2E5 772 aa14□□□□□ -0.17
ABCA3-201ENST00000301732 FYCO1Q9BQS8 1478 aa14□□□□□ -0.17
ABCA3-201ENST00000301732 CCDC170Q8IYT3 715 aa14□□□□□ -0.17
ABCA3-201ENST00000301732 NSRP1Q9H0G5 558 aaKnown RBP14□□□□□ -0.17
ABCA3-201ENST00000301732 MAP7D1Q3KQU3 841 aa14□□□□□ -0.17
ABCA3-201ENST00000301732 KAT6BQ8WYB5 2073 aa14□□□□□ -0.17
ABCA3-201ENST00000301732 TXNDC9O14530 226 aa14□□□□□ -0.17
ABCA3-201ENST00000301732 TACC1O75410 805 aa14□□□□□ -0.17
ABCA3-201ENST00000301732 OTUD7BQ6GQQ9 843 aa14□□□□□ -0.17
ABCA3-201ENST00000301732 CCDC42Q96M95 316 aa14□□□□□ -0.17
ABCA3-201ENST00000301732 CARD6Q9BX69 1037 aa14□□□□□ -0.17
ABCA3-201ENST00000301732 STK38LQ9Y2H1 464 aa14□□□□□ -0.17
ABCA3-201ENST00000301732 NDUFB9Q9Y6M9 179 aa14□□□□□ -0.17
ABCA3-201ENST00000301732 PABPN1LA6NDY0 278 aaKnown RBP14□□□□□ -0.17
ABCA3-201ENST00000301732 CYP7A1P22680 504 aa14□□□□□ -0.17
ABCA3-201ENST00000301732 PCK1P35558 622 aa14□□□□□ -0.17
ABCA3-201ENST00000301732 KIF5AQ12840 1032 aa14□□□□□ -0.17
ABCA3-201ENST00000301732 FAM114A1Q8IWE2 563 aa14□□□□□ -0.17
ABCA3-201ENST00000301732 SELENOOQ9BVL4 669 aa14□□□□□ -0.17
ABCA3-201ENST00000301732 KIF21BO75037 1637 aa13.99□□□□□ -0.17
ABCA3-201ENST00000301732 C8orf34Q49A92 452 aa13.99□□□□□ -0.17
ABCA3-201ENST00000301732 CEP85LQ5SZL2 805 aa13.99□□□□□ -0.17
ABCA3-201ENST00000301732 RASSF4Q9H2L5 321 aa13.99□□□□□ -0.17
ABCA3-201ENST00000301732 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.99□□□□□ -0.17
ABCA3-201ENST00000301732 HSPA1LP34931 641 aa13.99□□□□□ -0.17
ABCA3-201ENST00000301732 RAD51AP2Q09MP3 1159 aa13.99□□□□□ -0.17
ABCA3-201ENST00000301732 RFC1P35251 1148 aaPredicted RBP13.99□□□□□ -0.17
ABCA3-201ENST00000301732 GEN1Q17RS7 908 aa13.99□□□□□ -0.17
ABCA3-201ENST00000301732 SIRT1Q96EB6 747 aa13.99□□□□□ -0.17
ABCA3-201ENST00000301732 OPA1O60313 960 aa13.99□□□□□ -0.17
ABCA3-201ENST00000301732 CLNS1AP54105 237 aaKnown RBP13.99□□□□□ -0.17
ABCA3-201ENST00000301732 BEND3Q5T5X7 828 aa13.99□□□□□ -0.17
ABCA3-201ENST00000301732 FAM76AQ8TAV0 307 aa13.99□□□□□ -0.17
ABCA3-201ENST00000301732 ZNF287Q9HBT7 754 aa13.99□□□□□ -0.17
ABCA3-201ENST00000301732 LRPPRCP42704 1394 aaKnown RBP13.99□□□□□ -0.17
ABCA3-201ENST00000301732 SH3BP5O60239 455 aa13.99□□□□□ -0.17
ABCA3-201ENST00000301732 MCM5P33992 734 aa13.99□□□□□ -0.17
ABCA3-201ENST00000301732 ZNF131P52739 623 aa13.99□□□□□ -0.17
ABCA3-201ENST00000301732 ZNF174Q15697 407 aa13.99□□□□□ -0.17
ABCA3-201ENST00000301732 SMC1BQ8NDV3 1235 aa13.99□□□□□ -0.17
ABCA3-201ENST00000301732 RTN1Q16799 776 aa13.98□□□□□ -0.17
ABCA3-201ENST00000301732 FNBP4Q8N3X1 1017 aaPredicted RBP13.98□□□□□ -0.17
ABCA3-201ENST00000301732 RHPN1Q8TCX5 695 aa13.98□□□□□ -0.17
ABCA3-201ENST00000301732 ZNF692Q9BU19 519 aaPredicted RBP13.98□□□□□ -0.17
ABCA3-201ENST00000301732 RBM26Q5T8P6 1007 aaKnown RBP13.98□□□□□ -0.17
ABCA3-201ENST00000301732 PNMA8AQ86V59 439 aaPredicted RBP13.98□□□□□ -0.17
ABCA3-201ENST00000301732 VTI1AQ96AJ9 217 aa13.98□□□□□ -0.17
ABCA3-201ENST00000301732 EPSTI1Q96J88 318 aa13.98□□□□□ -0.17
ABCA3-201ENST00000301732 SCAPERQ9BY12 1400 aa13.98□□□□□ -0.17
ABCA3-201ENST00000301732 GOLGA6L9A6NEM1 432 aa13.98□□□□□ -0.17
ABCA3-201ENST00000301732 NAPAP54920 295 aa13.98□□□□□ -0.17
ABCA3-201ENST00000301732 PTPN21Q16825 1174 aa13.98□□□□□ -0.17
ABCA3-201ENST00000301732 STAMQ92783 540 aa13.98□□□□□ -0.17
ABCA3-201ENST00000301732 SSX2IPQ9Y2D8 614 aa13.98□□□□□ -0.17
ABCA3-201ENST00000301732 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.98□□□□□ -0.17
ABCA3-201ENST00000301732 BUB1BO60566 1050 aaPredicted RBP13.98□□□□□ -0.17
ABCA3-201ENST00000301732 UVSSAQ2YD98 709 aa13.98□□□□□ -0.17
ABCA3-201ENST00000301732 BMP2KLQ5H9B9 411 aa13.98□□□□□ -0.17
ABCA3-201ENST00000301732 PPANQ9NQ55 473 aaKnown RBP13.98□□□□□ -0.17
ABCA3-201ENST00000301732 TBC1D7Q9P0N9 293 aa13.98□□□□□ -0.17
ABCA3-201ENST00000301732 EIF6P56537 245 aaKnown RBP13.98□□□□□ -0.17
ABCA3-201ENST00000301732 CHAMP1Q96JM3 812 aa13.98□□□□□ -0.17
ABCA3-201ENST00000301732 TNNI2P48788 182 aa13.97□□□□□ -0.17
ABCA3-201ENST00000301732 NUCB1Q02818 461 aa13.97□□□□□ -0.17
ABCA3-201ENST00000301732 MIPOL1Q8TD10 442 aa13.97□□□□□ -0.17
ABCA3-201ENST00000301732 ESYT1Q9BSJ8 1104 aa13.97□□□□□ -0.17
ABCA3-201ENST00000301732 TRIM68Q6AZZ1 485 aa13.97□□□□□ -0.17
ABCA3-201ENST00000301732 ARHGEF2Q92974 986 aaKnown RBP13.97□□□□□ -0.17
ABCA3-201ENST00000301732 VWA3AA6NCI4 1184 aa13.97□□□□□ -0.17
ABCA3-201ENST00000301732 KRT5P13647 590 aa13.97□□□□□ -0.17
ABCA3-201ENST00000301732 KLHL7Q8IXQ5 586 aa13.97□□□□□ -0.17
ABCA3-201ENST00000301732 RNF41Q9H4P4 317 aaPredicted RBP13.97□□□□□ -0.17
ABCA3-201ENST00000301732 SMARCA4P51532 1647 aa13.97□□□□□ -0.17
ABCA3-201ENST00000301732 PPP1R12AO14974 1030 aaPredicted RBP13.97□□□□□ -0.17
ABCA3-201ENST00000301732 hCG_1642624A0A1W2PR95 340 aa13.97□□□□□ -0.17
ABCA3-201ENST00000301732 SPTLC2O15270 562 aa13.97□□□□□ -0.17
ABCA3-201ENST00000301732 CFAP157Q5JU67 520 aa13.97□□□□□ -0.17
ABCA3-201ENST00000301732 TAB3Q8N5C8 712 aaPredicted RBP13.97□□□□□ -0.17
ABCA3-201ENST00000301732 ATP6V0A2Q9Y487 856 aa13.97□□□□□ -0.17
ABCA3-201ENST00000301732 PLEKHH1Q9ULM0 1364 aa13.97□□□□□ -0.17
ABCA3-201ENST00000301732 CHMP2AO43633 222 aa13.96□□□□□ -0.17
ABCA3-201ENST00000301732 NCOA5Q9HCD5 579 aaKnown RBP13.96□□□□□ -0.17
ABCA3-201ENST00000301732 PFDN4Q9NQP4 134 aa13.96□□□□□ -0.17
ABCA3-201ENST00000301732 SAMD15Q9P1V8 674 aa13.96□□□□□ -0.17
ABCA3-201ENST00000301732 RASAL2Q9UJF2 1139 aa13.96□□□□□ -0.17
ABCA3-201ENST00000301732 KIF5BP33176 963 aa13.96□□□□□ -0.17
ABCA3-201ENST00000301732 CFAP57Q96MR6 1250 aa13.96□□□□□ -0.17
ABCA3-201ENST00000301732 CABP5Q9NP86 173 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms