RNA–Protein interactions for RNA: ENST00000301599.6

TMEM88-201, Transcript of transmembrane protein 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM88, Length 875 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88-201ENST00000301599 CAPNS2Q96L46 248 aa23.09■■□□□ 1.29
TMEM88-201ENST00000301599 GMLQ99445 158 aa23.09■■□□□ 1.29
TMEM88-201ENST00000301599 ZNF408Q9H9D4 720 aa23.09■■□□□ 1.29
TMEM88-201ENST00000301599 WBP1LQ9NX94 342 aa23.09■■□□□ 1.29
TMEM88-201ENST00000301599 CCDC57Q2TAC2 916 aa23.08■■□□□ 1.29
TMEM88-201ENST00000301599 TXNRD3Q86VQ6 643 aa23.08■■□□□ 1.29
TMEM88-201ENST00000301599 FOXN1O15353 648 aa23.07■■□□□ 1.28
TMEM88-201ENST00000301599 EPHA10Q5JZY3 1008 aa23.07■■□□□ 1.28
TMEM88-201ENST00000301599 STRIP1Q5VSL9 837 aa23.07■■□□□ 1.28
TMEM88-201ENST00000301599 CYP4F22Q6NT55 531 aa23.07■■□□□ 1.28
TMEM88-201ENST00000301599 HHIPL1Q96JK4 782 aa23.07■■□□□ 1.28
TMEM88-201ENST00000301599 ZNF609O15014 1411 aa23.07■■□□□ 1.28
TMEM88-201ENST00000301599 SCARF1Q14162 830 aa23.06■■□□□ 1.28
TMEM88-201ENST00000301599 SCN9AQ15858 1988 aa23.06■■□□□ 1.28
TMEM88-201ENST00000301599 TRPM7Q96QT4 1865 aa23.06■■□□□ 1.28
TMEM88-201ENST00000301599 CTCFP49711 727 aaPredicted RBP23.05■■□□□ 1.28
TMEM88-201ENST00000301599 GRM1Q13255 1194 aa23.05■■□□□ 1.28
TMEM88-201ENST00000301599 TAF7LQ5H9L4 462 aa23.05■■□□□ 1.28
TMEM88-201ENST00000301599 DACT2Q5SW24 774 aa23.05■■□□□ 1.28
TMEM88-201ENST00000301599 TTLL5Q6EMB2 1281 aa23.05■■□□□ 1.28
TMEM88-201ENST00000301599 LDHAL6AQ6ZMR3 332 aa23.05■■□□□ 1.28
TMEM88-201ENST00000301599 SULF1Q8IWU6 871 aa23.05■■□□□ 1.28
TMEM88-201ENST00000301599 TNS4Q8IZW8 715 aa23.05■■□□□ 1.28
TMEM88-201ENST00000301599 OGFOD1Q8N543 542 aa23.05■■□□□ 1.28
TMEM88-201ENST00000301599 SSH1Q8WYL5 1049 aa23.05■■□□□ 1.28
TMEM88-201ENST00000301599 FBXW7Q969H0 707 aa23.05■■□□□ 1.28
TMEM88-201ENST00000301599 MYOZ2Q9NPC6 264 aa23.05■■□□□ 1.28
TMEM88-201ENST00000301599 PTPRCP08575 1304 aa23.05■■□□□ 1.28
TMEM88-201ENST00000301599 TAF5LO75529 589 aa23.04■■□□□ 1.28
TMEM88-201ENST00000301599 MAP2K2P36507 400 aa23.04■■□□□ 1.28
TMEM88-201ENST00000301599 MMP14P50281 582 aa23.04■■□□□ 1.28
TMEM88-201ENST00000301599 DLK2Q6UY11 383 aa23.04■■□□□ 1.28
TMEM88-201ENST00000301599 HELBQ8NG08 1087 aaPredicted RBP23.04■■□□□ 1.28
TMEM88-201ENST00000301599 CDCA7LQ96GN5 454 aa23.04■■□□□ 1.28
TMEM88-201ENST00000301599 MYO3BQ8WXR4 1341 aa23.04■■□□□ 1.28
TMEM88-201ENST00000301599 ALDH1L2Q3SY69 923 aa23.03■■□□□ 1.28
TMEM88-201ENST00000301599 C15orf52Q6ZUT6 534 aaKnown RBP23.03■■□□□ 1.28
TMEM88-201ENST00000301599 C2orf69Q8N8R5 385 aa23.03■■□□□ 1.28
TMEM88-201ENST00000301599 ZNF594Q96JF6 807 aaPredicted RBP23.03■■□□□ 1.28
TMEM88-201ENST00000301599 PRDM10Q9NQV6 1147 aa23.03■■□□□ 1.28
TMEM88-201ENST00000301599 CNNM1Q9NRU3 951 aa23.03■■□□□ 1.28
TMEM88-201ENST00000301599 GGA3Q9NZ52 723 aa23.03■■□□□ 1.28
TMEM88-201ENST00000301599 ADM5C9JUS6 153 aa23.02■■□□□ 1.28
TMEM88-201ENST00000301599 NBPF7P0C2Y1 421 aaPredicted RBP23.02■■□□□ 1.28
TMEM88-201ENST00000301599 KLRK1P26718 216 aa23.02■■□□□ 1.28
TMEM88-201ENST00000301599 TRMT2AQ8IZ69 625 aaKnown RBP23.02■■□□□ 1.28
TMEM88-201ENST00000301599 UTYO14607 1347 aa23.02■■□□□ 1.28
TMEM88-201ENST00000301599 ANGEL2Q5VTE6 544 aaKnown RBP23.01■■□□□ 1.27
TMEM88-201ENST00000301599 SUCLG2Q96I99 432 aa23.01■■□□□ 1.27
TMEM88-201ENST00000301599 BEGAINQ9BUH8 593 aa23.01■■□□□ 1.27
TMEM88-201ENST00000301599 MXD3Q9BW11 206 aa23.01■■□□□ 1.27
TMEM88-201ENST00000301599 GBA2Q9HCG7 927 aaPredicted RBP23.01■■□□□ 1.27
TMEM88-201ENST00000301599 CD209Q9NNX6 404 aa23.01■■□□□ 1.27
TMEM88-201ENST00000301599 ASTN2O75129 1339 aaPredicted RBP23.01■■□□□ 1.27
TMEM88-201ENST00000301599 SPEF2Q9C093 1822 aa23.01■■□□□ 1.27
TMEM88-201ENST00000301599 SNAP23O00161 211 aa23■■□□□ 1.27
TMEM88-201ENST00000301599 PLIN1O60240 522 aa23■■□□□ 1.27
TMEM88-201ENST00000301599 HUNKP57058 714 aa23■■□□□ 1.27
TMEM88-201ENST00000301599 GTF2IP78347 998 aa23■■□□□ 1.27
TMEM88-201ENST00000301599 AOC2O75106 756 aa22.99■■□□□ 1.27
TMEM88-201ENST00000301599 CT47B1P0C2W7 299 aaPredicted RBP22.99■■□□□ 1.27
TMEM88-201ENST00000301599 ZNF804AQ7Z570 1209 aa22.99■■□□□ 1.27
TMEM88-201ENST00000301599 KAZALD1Q96I82 304 aa22.99■■□□□ 1.27
TMEM88-201ENST00000301599 POLR2AP24928 1970 aaKnown RBP22.98■■□□□ 1.27
TMEM88-201ENST00000301599 HDAC9Q9UKV0 1011 aa22.98■■□□□ 1.27
TMEM88-201ENST00000301599 PITPNM2Q9BZ72 1349 aa22.98■■□□□ 1.27
TMEM88-201ENST00000301599 LBX1P52954 281 aa22.97■■□□□ 1.27
TMEM88-201ENST00000301599 NBPF9Q3BBW0 867 aa22.97■■□□□ 1.27
TMEM88-201ENST00000301599 SMC4Q9NTJ3 1288 aa22.97■■□□□ 1.27
TMEM88-201ENST00000301599 IRS2Q9Y4H2 1338 aa22.97■■□□□ 1.27
TMEM88-201ENST00000301599 PSME4Q14997 1843 aa22.96■■□□□ 1.27
TMEM88-201ENST00000301599 IL1R1P14778 569 aa22.96■■□□□ 1.27
TMEM88-201ENST00000301599 CDCA5Q96FF9 252 aa22.96■■□□□ 1.27
TMEM88-201ENST00000301599 BICC1Q9H694 974 aaKnown RBP22.96■■□□□ 1.27
TMEM88-201ENST00000301599 WNT10BO00744 389 aa22.95■■□□□ 1.26
TMEM88-201ENST00000301599 HSPA8P11142 646 aaKnown RBP22.95■■□□□ 1.26
TMEM88-201ENST00000301599 NOGQ13253 232 aa22.95■■□□□ 1.26
TMEM88-201ENST00000301599 UBE4AQ14139 1066 aa22.95■■□□□ 1.26
TMEM88-201ENST00000301599 RABL6Q3YEC7 729 aaPredicted RBP22.95■■□□□ 1.26
TMEM88-201ENST00000301599 RGMBQ6NW40 437 aa22.95■■□□□ 1.26
TMEM88-201ENST00000301599 KIAA0825Q8IV33 1275 aa22.95■■□□□ 1.26
TMEM88-201ENST00000301599 CCDC102AQ96A19 550 aa22.95■■□□□ 1.26
TMEM88-201ENST00000301599 USP44Q9H0E7 712 aa22.95■■□□□ 1.26
TMEM88-201ENST00000301599 PUS3Q9BZE2 481 aaKnown RBP22.94■■□□□ 1.26
TMEM88-201ENST00000301599 RIPOR2Q9Y4F9 1068 aa22.94■■□□□ 1.26
TMEM88-201ENST00000301599 MROH5Q6ZUA9 1318 aa22.93■■□□□ 1.26
TMEM88-201ENST00000301599 SASH1O94885 1247 aa22.92■■□□□ 1.26
TMEM88-201ENST00000301599 ZNF157P51786 506 aaPredicted RBP22.92■■□□□ 1.26
TMEM88-201ENST00000301599 BRPF1P55201 1214 aaPredicted RBP22.92■■□□□ 1.26
TMEM88-201ENST00000301599 FKBP1AP62942 108 aaKnown RBP22.92■■□□□ 1.26
TMEM88-201ENST00000301599 FKBP1BP68106 108 aa22.92■■□□□ 1.26
TMEM88-201ENST00000301599 ANKRD44Q8N8A2 993 aa22.92■■□□□ 1.26
TMEM88-201ENST00000301599 CA12O43570 354 aa22.91■■□□□ 1.26
TMEM88-201ENST00000301599 HIBADHP31937 336 aaKnown RBP22.9■■□□□ 1.26
TMEM88-201ENST00000301599 DLGAP5Q15398 846 aa22.9■■□□□ 1.26
TMEM88-201ENST00000301599 CERS5Q8N5B7 392 aa22.9■■□□□ 1.26
TMEM88-201ENST00000301599 ZBED3Q96IU2 234 aaPredicted RBP22.9■■□□□ 1.26
TMEM88-201ENST00000301599 NOB1Q9ULX3 412 aaKnown RBP22.9■■□□□ 1.26
TMEM88-201ENST00000301599 FAM155AB1AL88 458 aaPredicted RBP22.89■■□□□ 1.25
TMEM88-201ENST00000301599 TDRD7Q8NHU6 1098 aaKnown RBP22.89■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms