RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 MAPK8IP1Q9UQF2 711 aa15.36■□□□□ 0.05
CASC4-201ENST00000299957 CCDC66A2RUB6 948 aa15.36■□□□□ 0.05
CASC4-201ENST00000299957 NEURL1BA8MQ27 555 aa15.36■□□□□ 0.05
CASC4-201ENST00000299957 ZBTB43O43298 467 aa15.36■□□□□ 0.05
CASC4-201ENST00000299957 ADD1P35611 737 aaKnown RBP15.36■□□□□ 0.05
CASC4-201ENST00000299957 TRMT44Q8IYL2 757 aaKnown RBP15.36■□□□□ 0.05
CASC4-201ENST00000299957 CYP2E1P05181 493 aaPredicted RBP15.35■□□□□ 0.05
CASC4-201ENST00000299957 ZNF827Q17R98 1081 aa15.35■□□□□ 0.05
CASC4-201ENST00000299957 C11orf57Q6ZUT1 292 aaPredicted RBP15.35■□□□□ 0.05
CASC4-201ENST00000299957 PUF60Q9UHX1 559 aaKnown RBP15.35■□□□□ 0.05
CASC4-201ENST00000299957 PRDM1O75626 825 aa15.35■□□□□ 0.05
CASC4-201ENST00000299957 DHX58Q96C10 678 aa15.35■□□□□ 0.05
CASC4-201ENST00000299957 E9PCH4 1651 aa15.35■□□□□ 0.05
CASC4-201ENST00000299957 RNF113AO15541 343 aaKnown RBP15.35■□□□□ 0.05
CASC4-201ENST00000299957 CASQ1P31415 396 aa15.35■□□□□ 0.05
CASC4-201ENST00000299957 SSRP1Q08945 709 aaKnown RBP15.35■□□□□ 0.05
CASC4-201ENST00000299957 SCRN1Q12765 414 aa15.35■□□□□ 0.05
CASC4-201ENST00000299957 PAXBP1Q9Y5B6 917 aa15.35■□□□□ 0.05
CASC4-201ENST00000299957 TAF5LO75529 589 aa15.34■□□□□ 0.05
CASC4-201ENST00000299957 DDIT3P35638 169 aa15.34■□□□□ 0.05
CASC4-201ENST00000299957 FAM160A1Q05DH4 1040 aa15.34■□□□□ 0.05
CASC4-201ENST00000299957 METTL22Q9BUU2 404 aaPredicted RBP15.34■□□□□ 0.05
CASC4-201ENST00000299957 LRRC7Q96NW7 1537 aa15.34■□□□□ 0.05
CASC4-201ENST00000299957 COBLO75128 1261 aa15.34■□□□□ 0.05
CASC4-201ENST00000299957 ERCC3P19447 782 aa15.34■□□□□ 0.05
CASC4-201ENST00000299957 MAP4K1Q92918 833 aa15.34■□□□□ 0.05
CASC4-201ENST00000299957 EEF2KMTQ96G04 330 aa15.34■□□□□ 0.05
CASC4-201ENST00000299957 XPO4Q9C0E2 1151 aaKnown RBP15.34■□□□□ 0.05
CASC4-201ENST00000299957 CROCC2H7BZ55 1655 aa15.34■□□□□ 0.05
CASC4-201ENST00000299957 ABCA6Q8N139 1617 aa15.34■□□□□ 0.05
CASC4-201ENST00000299957 SLU7O95391 586 aaKnown RBP15.34■□□□□ 0.05
CASC4-201ENST00000299957 STARD3NLO95772 234 aa15.34■□□□□ 0.05
CASC4-201ENST00000299957 IBSPP21815 317 aaPredicted RBP15.34■□□□□ 0.05
CASC4-201ENST00000299957 ANKRD18BA2A2Z9 1011 aa15.34■□□□□ 0.05
CASC4-201ENST00000299957 ADAMTS2O95450 1211 aa15.34■□□□□ 0.05
CASC4-201ENST00000299957 IL15P40933 162 aaPredicted RBP15.34■□□□□ 0.05
CASC4-201ENST00000299957 ZAP70P43403 619 aa15.34■□□□□ 0.05
CASC4-201ENST00000299957 GSDMDP57764 484 aa15.34■□□□□ 0.05
CASC4-201ENST00000299957 ERCC6LQ2NKX8 1250 aa15.34■□□□□ 0.05
CASC4-201ENST00000299957 LONRF3Q496Y0 759 aa15.34■□□□□ 0.05
CASC4-201ENST00000299957 FKBP15Q5T1M5 1219 aa15.34■□□□□ 0.05
CASC4-201ENST00000299957 CENPHQ9H3R5 247 aa15.34■□□□□ 0.05
CASC4-201ENST00000299957 E7EWF7 191 aa15.33■□□□□ 0.04
CASC4-201ENST00000299957 KBTBD3Q8NAB2 608 aa15.33■□□□□ 0.04
CASC4-201ENST00000299957 AIFM3Q96NN9 605 aa15.33■□□□□ 0.04
CASC4-201ENST00000299957 PLXNC1O60486 1568 aa15.33■□□□□ 0.04
CASC4-201ENST00000299957 KRT222Q8N1A0 295 aa15.33■□□□□ 0.04
CASC4-201ENST00000299957 NUP88Q99567 741 aaPredicted RBP15.33■□□□□ 0.04
CASC4-201ENST00000299957 TANGO6Q9C0B7 1094 aa15.33■□□□□ 0.04
CASC4-201ENST00000299957 VAT1LQ9HCJ6 419 aa15.33■□□□□ 0.04
CASC4-201ENST00000299957 KCNJ14Q9UNX9 436 aa15.33■□□□□ 0.04
CASC4-201ENST00000299957 MATR3P43243 847 aaKnown RBP eCLIP15.33■□□□□ 0.04
CASC4-201ENST00000299957 EIF5P55010 431 aaKnown RBP15.33■□□□□ 0.04
CASC4-201ENST00000299957 MAP3K12Q12852 859 aa15.33■□□□□ 0.04
CASC4-201ENST00000299957 KCNG4Q8TDN1 519 aa15.33■□□□□ 0.04
CASC4-201ENST00000299957 IGSF1Q8N6C5 1336 aa15.32■□□□□ 0.04
CASC4-201ENST00000299957 TULP4Q9NRJ4 1543 aa15.32■□□□□ 0.04
CASC4-201ENST00000299957 PDIA4P13667 645 aaKnown RBP15.32■□□□□ 0.04
CASC4-201ENST00000299957 KIAA1524Q8TCG1 905 aa15.32■□□□□ 0.04
CASC4-201ENST00000299957 SMARCE1Q969G3 411 aa15.32■□□□□ 0.04
CASC4-201ENST00000299957 ACSBG1Q96GR2 724 aa15.32■□□□□ 0.04
CASC4-201ENST00000299957 PDLIM2Q96JY6 352 aa15.32■□□□□ 0.04
CASC4-201ENST00000299957 CLIC6Q96NY7 704 aa15.32■□□□□ 0.04
CASC4-201ENST00000299957 ZNF202O95125 648 aa15.32■□□□□ 0.04
CASC4-201ENST00000299957 LMAN1P49257 510 aa15.32■□□□□ 0.04
CASC4-201ENST00000299957 MFSD6Q6ZSS7 791 aa15.32■□□□□ 0.04
CASC4-201ENST00000299957 CCDC24Q8N4L8 307 aa15.32■□□□□ 0.04
CASC4-201ENST00000299957 NOL10Q9BSC4 688 aaKnown RBP15.32■□□□□ 0.04
CASC4-201ENST00000299957 DRC1Q96MC2 740 aa15.32■□□□□ 0.04
CASC4-201ENST00000299957 HINFPQ9BQA5 517 aa15.32■□□□□ 0.04
CASC4-201ENST00000299957 PNPLA6Q8IY17 1366 aa15.31■□□□□ 0.04
CASC4-201ENST00000299957 NLRP1Q9C000 1473 aa15.31■□□□□ 0.04
CASC4-201ENST00000299957 FAM170AA1A519 330 aa15.31■□□□□ 0.04
CASC4-201ENST00000299957 GPAA1O43292 621 aa15.31■□□□□ 0.04
CASC4-201ENST00000299957 USP5P45974 858 aa15.31■□□□□ 0.04
CASC4-201ENST00000299957 CARD6Q9BX69 1037 aa15.31■□□□□ 0.04
CASC4-201ENST00000299957 TBX22Q9Y458 520 aa15.31■□□□□ 0.04
CASC4-201ENST00000299957 CLIC4Q9Y696 253 aa15.31■□□□□ 0.04
CASC4-201ENST00000299957 UNC13BO14795 1591 aa15.31■□□□□ 0.04
CASC4-201ENST00000299957 SNAP23O00161 211 aa15.31■□□□□ 0.04
CASC4-201ENST00000299957 ZSCAN12O43309 604 aa15.31■□□□□ 0.04
CASC4-201ENST00000299957 ADORA1P30542 326 aa15.31■□□□□ 0.04
CASC4-201ENST00000299957 NDUFA8P51970 172 aa15.31■□□□□ 0.04
CASC4-201ENST00000299957 ZCRB1Q8TBF4 217 aaKnown RBP15.31■□□□□ 0.04
CASC4-201ENST00000299957 XAGE2Q96GT9 111 aa15.31■□□□□ 0.04
CASC4-201ENST00000299957 CCP110O43303 1012 aa15.3■□□□□ 0.04
CASC4-201ENST00000299957 NECTIN1Q15223 517 aa15.3■□□□□ 0.04
CASC4-201ENST00000299957 MAGEB6Q8N7X4 407 aa15.3■□□□□ 0.04
CASC4-201ENST00000299957 TM6SF1Q9BZW5 370 aa15.3■□□□□ 0.04
CASC4-201ENST00000299957 DEF6Q9H4E7 631 aa15.3■□□□□ 0.04
CASC4-201ENST00000299957 MAGEC2Q9UBF1 373 aaPredicted RBP15.3■□□□□ 0.04
CASC4-201ENST00000299957 KIF1BO60333 1816 aa15.3■□□□□ 0.04
CASC4-201ENST00000299957 ZCCHC11Q5TAX3 1644 aaKnown RBP15.3■□□□□ 0.04
CASC4-201ENST00000299957 EYA2O00167 538 aa15.3■□□□□ 0.04
CASC4-201ENST00000299957 NEMFO60524 1076 aa15.3■□□□□ 0.04
CASC4-201ENST00000299957 PNOCQ13519 176 aa15.3■□□□□ 0.04
CASC4-201ENST00000299957 N4BP3O15049 544 aa15.3■□□□□ 0.04
CASC4-201ENST00000299957 RHOXF2BP0C7M4 288 aa15.3■□□□□ 0.04
CASC4-201ENST00000299957 IGHMBP2P38935 993 aaKnown RBP15.3■□□□□ 0.04
CASC4-201ENST00000299957 TXLNAP40222 546 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms