RNA–Protein interactions for RNA: ENST00000298746.4

TRUB1-201, Transcript of TruB pseudouridine synthase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRUB1, Length 3,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-201ENST00000298746 PSDA5PKW4 1024 aaPredicted RBP13.19□□□□□ -0.3
TRUB1-201ENST00000298746 NAA16Q6N069 864 aaPredicted RBP13.19□□□□□ -0.3
TRUB1-201ENST00000298746 CCDC12Q8WUD4 166 aaPredicted RBP13.19□□□□□ -0.3
TRUB1-201ENST00000298746 ZNF202O95125 648 aa13.19□□□□□ -0.3
TRUB1-201ENST00000298746 PLA2G4AP47712 749 aa13.19□□□□□ -0.3
TRUB1-201ENST00000298746 PIP4K2AP48426 406 aaPredicted RBP13.19□□□□□ -0.3
TRUB1-201ENST00000298746 RSPH14Q9UHP6 348 aa13.19□□□□□ -0.3
TRUB1-201ENST00000298746 MYO5BQ9ULV0 1848 aa13.19□□□□□ -0.3
TRUB1-201ENST00000298746 PRAMEF22A3QJZ6 481 aa13.19□□□□□ -0.3
TRUB1-201ENST00000298746 HMGB1P09429 215 aaKnown RBP13.19□□□□□ -0.3
TRUB1-201ENST00000298746 H2AFXP16104 143 aaPredicted RBP13.19□□□□□ -0.3
TRUB1-201ENST00000298746 TFCP2Q12800 502 aa13.19□□□□□ -0.3
TRUB1-201ENST00000298746 LINS1Q8NG48 757 aa13.19□□□□□ -0.3
TRUB1-201ENST00000298746 SMARCE1Q969G3 411 aa13.19□□□□□ -0.3
TRUB1-201ENST00000298746 SRRTQ9BXP5 876 aaKnown RBP13.19□□□□□ -0.3
TRUB1-201ENST00000298746 CLIC4Q9Y696 253 aa13.19□□□□□ -0.3
TRUB1-201ENST00000298746 ATP2B1P20020 1258 aa13.18□□□□□ -0.3
TRUB1-201ENST00000298746 LRRFIP1Q32MZ4 808 aaKnown RBP13.18□□□□□ -0.3
TRUB1-201ENST00000298746 CPLX3Q8WVH0 158 aa13.18□□□□□ -0.3
TRUB1-201ENST00000298746 DBNDD2Q9BQY9 259 aa13.18□□□□□ -0.3
TRUB1-201ENST00000298746 OSBPL5Q9H0X9 879 aaPredicted RBP13.18□□□□□ -0.3
TRUB1-201ENST00000298746 RASSF4Q9H2L5 321 aa13.18□□□□□ -0.3
TRUB1-201ENST00000298746 PHACTR2O75167 634 aa13.18□□□□□ -0.3
TRUB1-201ENST00000298746 SYKP43405 635 aa13.18□□□□□ -0.3
TRUB1-201ENST00000298746 DHX8Q14562 1220 aaKnown RBP13.18□□□□□ -0.3
TRUB1-201ENST00000298746 HSP90B2PQ58FF3 399 aa13.18□□□□□ -0.3
TRUB1-201ENST00000298746 GOLGA6L1Q8N7Z2 621 aa13.18□□□□□ -0.3
TRUB1-201ENST00000298746 KCNB2Q92953 911 aa13.18□□□□□ -0.3
TRUB1-201ENST00000298746 CCDC102AQ96A19 550 aa13.18□□□□□ -0.3
TRUB1-201ENST00000298746 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.18□□□□□ -0.3
TRUB1-201ENST00000298746 PLEKHG3A1L390 1219 aa13.17□□□□□ -0.3
TRUB1-201ENST00000298746 GIGYF1O75420 1035 aaPredicted RBP13.17□□□□□ -0.3
TRUB1-201ENST00000298746 PPP2R3AQ06190 1150 aa13.17□□□□□ -0.3
TRUB1-201ENST00000298746 ADALQ6DHV7 355 aa13.17□□□□□ -0.3
TRUB1-201ENST00000298746 RALYLQ86SE5 291 aaKnown RBP13.17□□□□□ -0.3
TRUB1-201ENST00000298746 KCNG4Q8TDN1 519 aa13.17□□□□□ -0.3
TRUB1-201ENST00000298746 PUF60Q9UHX1 559 aaKnown RBP13.17□□□□□ -0.3
TRUB1-201ENST00000298746 PFKFB2O60825 505 aa13.17□□□□□ -0.3
TRUB1-201ENST00000298746 PLEKHO1Q53GL0 409 aaPredicted RBP13.17□□□□□ -0.3
TRUB1-201ENST00000298746 NBPF11Q86T75 865 aa13.17□□□□□ -0.3
TRUB1-201ENST00000298746 LLPHQ9BRT6 129 aaKnown RBP13.17□□□□□ -0.3
TRUB1-201ENST00000298746 GJB4Q9NTQ9 266 aa13.17□□□□□ -0.3
TRUB1-201ENST00000298746 VPS18Q9P253 973 aa13.17□□□□□ -0.3
TRUB1-201ENST00000298746 USP42Q9H9J4 1324 aaKnown RBP13.17□□□□□ -0.3
TRUB1-201ENST00000298746 SETD1BQ9UPS6 1966 aaKnown RBP13.17□□□□□ -0.3
TRUB1-201ENST00000298746 GOLGA8BA8MQT2 603 aa13.17□□□□□ -0.3
TRUB1-201ENST00000298746 CAPN2P17655 700 aa13.17□□□□□ -0.3
TRUB1-201ENST00000298746 FKBP4Q02790 459 aaKnown RBP eCLIP13.17□□□□□ -0.3
TRUB1-201ENST00000298746 UBE3BQ7Z3V4 1068 aa13.17□□□□□ -0.3
TRUB1-201ENST00000298746 IPO4Q8TEX9 1081 aaKnown RBP13.17□□□□□ -0.3
TRUB1-201ENST00000298746 LRRC59Q96AG4 307 aaKnown RBP13.17□□□□□ -0.3
TRUB1-201ENST00000298746 L2HGDHQ9H9P8 463 aa13.17□□□□□ -0.3
TRUB1-201ENST00000298746 NLRP12P59046 1061 aa13.16□□□□□ -0.3
TRUB1-201ENST00000298746 CHMP4CQ96CF2 233 aa13.16□□□□□ -0.3
TRUB1-201ENST00000298746 LZTFL1Q9NQ48 299 aa13.16□□□□□ -0.3
TRUB1-201ENST00000298746 EFCAB8A8MWE9 144 aa13.16□□□□□ -0.3
TRUB1-201ENST00000298746 ATP5J2-PTCD1G3V325 749 aa13.16□□□□□ -0.3
TRUB1-201ENST00000298746 PTCD1O75127 700 aaKnown RBP13.16□□□□□ -0.3
TRUB1-201ENST00000298746 DESI2Q9BSY9 194 aa13.16□□□□□ -0.3
TRUB1-201ENST00000298746 DHX16O60231 1041 aaKnown RBP13.16□□□□□ -0.3
TRUB1-201ENST00000298746 TUBB4AP04350 444 aa13.16□□□□□ -0.3
TRUB1-201ENST00000298746 FMR1NBQ8N0W7 255 aaPredicted RBP13.16□□□□□ -0.3
TRUB1-201ENST00000298746 DBNLQ9UJU6 430 aaKnown RBP13.16□□□□□ -0.3
TRUB1-201ENST00000298746 ROBO2Q9HCK4 1378 aa13.16□□□□□ -0.3
TRUB1-201ENST00000298746 USP6P35125 1406 aa13.15□□□□□ -0.3
TRUB1-201ENST00000298746 KLF18A0A0U1RQI7 1052 aa13.15□□□□□ -0.3
TRUB1-201ENST00000298746 ADKP55263 362 aaKnown RBP13.15□□□□□ -0.3
TRUB1-201ENST00000298746 MYL5Q02045 173 aa13.15□□□□□ -0.3
TRUB1-201ENST00000298746 JAKMIP3Q5VZ66 844 aa13.15□□□□□ -0.3
TRUB1-201ENST00000298746 GPHNQ9NQX3 736 aaPredicted RBP13.15□□□□□ -0.3
TRUB1-201ENST00000298746 AMOTL2Q9Y2J4 779 aa13.15□□□□□ -0.3
TRUB1-201ENST00000298746 ADCY9O60503 1353 aa13.15□□□□□ -0.3
TRUB1-201ENST00000298746 SLC39A6Q13433 755 aa13.15□□□□□ -0.3
TRUB1-201ENST00000298746 MTX1Q13505 466 aa13.15□□□□□ -0.3
TRUB1-201ENST00000298746 ENGASEQ8NFI3 743 aa13.15□□□□□ -0.3
TRUB1-201ENST00000298746 BAG1Q99933 345 aaPredicted RBP13.15□□□□□ -0.3
TRUB1-201ENST00000298746 SNRKQ9NRH2 765 aa13.15□□□□□ -0.3
TRUB1-201ENST00000298746 EID1Q9Y6B2 187 aa13.15□□□□□ -0.3
TRUB1-201ENST00000298746 APPP05067 770 aa13.14□□□□□ -0.31
TRUB1-201ENST00000298746 NOM1Q5C9Z4 860 aaKnown RBP13.14□□□□□ -0.31
TRUB1-201ENST00000298746 CNNM3Q8NE01 707 aa13.14□□□□□ -0.31
TRUB1-201ENST00000298746 BABAM1Q9NWV8 329 aa13.14□□□□□ -0.31
TRUB1-201ENST00000298746 FEZ2Q9UHY8 353 aaPredicted RBP13.14□□□□□ -0.31
TRUB1-201ENST00000298746 PPP2R2CQ9Y2T4 447 aa13.14□□□□□ -0.31
TRUB1-201ENST00000298746 TRIM66O15016 1216 aa13.14□□□□□ -0.31
TRUB1-201ENST00000298746 PFKFB1P16118 471 aa13.14□□□□□ -0.31
TRUB1-201ENST00000298746 FAM69CQ0P6D2 419 aa13.14□□□□□ -0.31
TRUB1-201ENST00000298746 TRIM29Q14134 588 aa13.14□□□□□ -0.31
TRUB1-201ENST00000298746 KIF4BQ2VIQ3 1234 aa13.14□□□□□ -0.31
TRUB1-201ENST00000298746 TNNI3KQ59H18 835 aa13.14□□□□□ -0.31
TRUB1-201ENST00000298746 ATL3Q6DD88 541 aa13.14□□□□□ -0.31
TRUB1-201ENST00000298746 FPGT-TNNI3KV9GXZ4 949 aa13.14□□□□□ -0.31
TRUB1-201ENST00000298746 DLC1Q96QB1 1528 aa13.14□□□□□ -0.31
TRUB1-201ENST00000298746 FAM193AP78312 1265 aa13.14□□□□□ -0.31
TRUB1-201ENST00000298746 PNOCQ13519 176 aa13.14□□□□□ -0.31
TRUB1-201ENST00000298746 CCDC158Q5M9N0 1113 aa13.14□□□□□ -0.31
TRUB1-201ENST00000298746 STOX1Q6ZVD7 989 aa13.14□□□□□ -0.31
TRUB1-201ENST00000298746 JMYQ8N9B5 988 aa13.14□□□□□ -0.31
TRUB1-201ENST00000298746 DPF2Q92785 391 aa13.14□□□□□ -0.31
TRUB1-201ENST00000298746 GOLGA1Q92805 767 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms