RNA–Protein interactions for RNA: ENST00000295688.7

CCT3-201, Transcript of chaperonin containing TCP1 subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT3, Length 2,150 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT3-201ENST00000295688 NLRP2Q9NX02 1062 aa17.35■□□□□ 0.37
CCT3-201ENST00000295688 SPEF2Q9C093 1822 aa17.34■□□□□ 0.37
CCT3-201ENST00000295688 CTDNEP1O95476 244 aa17.34■□□□□ 0.37
CCT3-201ENST00000295688 IL15P40933 162 aaPredicted RBP17.34■□□□□ 0.37
CCT3-201ENST00000295688 CEBPZQ03701 1054 aaKnown RBP17.34■□□□□ 0.37
CCT3-201ENST00000295688 APOBRQ0VD83 1088 aa17.34■□□□□ 0.37
CCT3-201ENST00000295688 TMEM94Q12767 1356 aa17.34■□□□□ 0.37
CCT3-201ENST00000295688 LMBR1LQ6UX01 489 aa17.34■□□□□ 0.37
CCT3-201ENST00000295688 ENGASEQ8NFI3 743 aa17.34■□□□□ 0.37
CCT3-201ENST00000295688 LRRC2Q9BYS8 371 aa17.34■□□□□ 0.37
CCT3-201ENST00000295688 SALL1Q9NSC2 1324 aa17.33■□□□□ 0.37
CCT3-201ENST00000295688 CBX1P83916 185 aa17.33■□□□□ 0.37
CCT3-201ENST00000295688 SNW1Q13573 536 aaKnown RBP17.33■□□□□ 0.37
CCT3-201ENST00000295688 C11orf57Q6ZUT1 292 aaPredicted RBP17.33■□□□□ 0.37
CCT3-201ENST00000295688 USP28Q96RU2 1077 aa17.33■□□□□ 0.37
CCT3-201ENST00000295688 CGNQ9P2M7 1197 aaKnown RBP17.33■□□□□ 0.37
CCT3-201ENST00000295688 E7EWF7 191 aa17.33■□□□□ 0.36
CCT3-201ENST00000295688 H7C1W4 665 aa17.33■□□□□ 0.36
CCT3-201ENST00000295688 GOLIM4O00461 696 aa17.33■□□□□ 0.36
CCT3-201ENST00000295688 CCDC144BQ3MJ40 725 aa17.33■□□□□ 0.36
CCT3-201ENST00000295688 CEP135Q66GS9 1140 aa17.33■□□□□ 0.36
CCT3-201ENST00000295688 CCDC144CPQ8IYA2 1237 aa17.33■□□□□ 0.36
CCT3-201ENST00000295688 NEUROD6Q96NK8 337 aa17.33■□□□□ 0.36
CCT3-201ENST00000295688 NDUFB9Q9Y6M9 179 aa17.33■□□□□ 0.36
CCT3-201ENST00000295688 GSDMDP57764 484 aa17.32■□□□□ 0.36
CCT3-201ENST00000295688 FSIP1Q8NA03 581 aa17.32■□□□□ 0.36
CCT3-201ENST00000295688 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.32■□□□□ 0.36
CCT3-201ENST00000295688 LAMB4A4D0S4 1761 aa17.32■□□□□ 0.36
CCT3-201ENST00000295688 A0A1W2PQ27 194 aa17.32■□□□□ 0.36
CCT3-201ENST00000295688 A0A1W2PQ64 194 aa17.32■□□□□ 0.36
CCT3-201ENST00000295688 A0A1W2PQD8 194 aa17.32■□□□□ 0.36
CCT3-201ENST00000295688 KIF2AO00139 706 aaPredicted RBP17.32■□□□□ 0.36
CCT3-201ENST00000295688 RNF113AO15541 343 aaKnown RBP17.32■□□□□ 0.36
CCT3-201ENST00000295688 HSPD1P10809 573 aaKnown RBP17.32■□□□□ 0.36
CCT3-201ENST00000295688 PDIA3P30101 505 aaKnown RBP17.32■□□□□ 0.36
CCT3-201ENST00000295688 ME1P48163 572 aa17.32■□□□□ 0.36
CCT3-201ENST00000295688 NCBP1Q09161 790 aaKnown RBP17.32■□□□□ 0.36
CCT3-201ENST00000295688 GOLPH3LQ9H4A5 285 aa17.32■□□□□ 0.36
CCT3-201ENST00000295688 KCND1Q9NSA2 647 aa17.32■□□□□ 0.36
CCT3-201ENST00000295688 RTEL1Q9NZ71 1219 aa17.32■□□□□ 0.36
CCT3-201ENST00000295688 CTNNA3Q9UI47 895 aa17.32■□□□□ 0.36
CCT3-201ENST00000295688 ATP5J2-PTCD1G3V325 749 aa17.31■□□□□ 0.36
CCT3-201ENST00000295688 PTCD1O75127 700 aaKnown RBP17.31■□□□□ 0.36
CCT3-201ENST00000295688 EVCP57679 992 aa17.31■□□□□ 0.36
CCT3-201ENST00000295688 CCT2P78371 535 aaKnown RBP17.31■□□□□ 0.36
CCT3-201ENST00000295688 FOXO4P98177 505 aa17.31■□□□□ 0.36
CCT3-201ENST00000295688 ADALQ6DHV7 355 aa17.31■□□□□ 0.36
CCT3-201ENST00000295688 MRPS27Q92552 414 aaKnown RBP17.31■□□□□ 0.36
CCT3-201ENST00000295688 IMPACTQ9P2X3 320 aa17.31■□□□□ 0.36
CCT3-201ENST00000295688 DHX16O60231 1041 aaKnown RBP17.3■□□□□ 0.36
CCT3-201ENST00000295688 IFIT1P09914 478 aaKnown RBP17.3■□□□□ 0.36
CCT3-201ENST00000295688 ZC3H6P61129 1189 aaKnown RBP17.3■□□□□ 0.36
CCT3-201ENST00000295688 PTPN14Q15678 1187 aa17.3■□□□□ 0.36
CCT3-201ENST00000295688 ZRSR1Q15695 479 aaKnown RBP17.3■□□□□ 0.36
CCT3-201ENST00000295688 ATG9AQ7Z3C6 839 aa17.3■□□□□ 0.36
CCT3-201ENST00000295688 RGS22Q8NE09 1264 aa17.3■□□□□ 0.36
CCT3-201ENST00000295688 ATG3Q9NT62 314 aa17.3■□□□□ 0.36
CCT3-201ENST00000295688 OGFRQ9NZT2 677 aa17.3■□□□□ 0.36
CCT3-201ENST00000295688 SKILP12757 684 aa17.3■□□□□ 0.36
CCT3-201ENST00000295688 DHX40Q8IX18 779 aaKnown RBP17.3■□□□□ 0.36
CCT3-201ENST00000295688 CWC25Q9NXE8 425 aaPredicted RBP17.3■□□□□ 0.36
CCT3-201ENST00000295688 KCNG4Q8TDN1 519 aa17.29■□□□□ 0.36
CCT3-201ENST00000295688 BPIFA3Q9BQP9 254 aa17.29■□□□□ 0.36
CCT3-201ENST00000295688 SDF4Q9BRK5 362 aa17.29■□□□□ 0.36
CCT3-201ENST00000295688 NAP1L2Q9ULW6 460 aaPredicted RBP17.29■□□□□ 0.36
CCT3-201ENST00000295688 CARMIL3Q8ND23 1372 aa17.29■□□□□ 0.36
CCT3-201ENST00000295688 ALS2Q96Q42 1657 aa17.29■□□□□ 0.36
CCT3-201ENST00000295688 CCDC69A6NI79 296 aa17.29■□□□□ 0.36
CCT3-201ENST00000295688 CIAO1O76071 339 aa17.29■□□□□ 0.36
CCT3-201ENST00000295688 CHGBP05060 677 aa17.29■□□□□ 0.36
CCT3-201ENST00000295688 CABP4P57796 275 aa17.29■□□□□ 0.36
CCT3-201ENST00000295688 TPM4P67936 248 aa17.29■□□□□ 0.36
CCT3-201ENST00000295688 FMR1NBQ8N0W7 255 aaPredicted RBP17.29■□□□□ 0.36
CCT3-201ENST00000295688 EYA2O00167 538 aa17.28■□□□□ 0.36
CCT3-201ENST00000295688 YEATS4O95619 227 aa17.28■□□□□ 0.36
CCT3-201ENST00000295688 ZFYP08048 801 aaPredicted RBP17.28■□□□□ 0.36
CCT3-201ENST00000295688 SF3A1Q15459 793 aaKnown RBP17.28■□□□□ 0.36
CCT3-201ENST00000295688 PCDHA7Q9UN72 937 aa17.28■□□□□ 0.36
CCT3-201ENST00000295688 MEGF6O75095 1541 aa17.28■□□□□ 0.36
CCT3-201ENST00000295688 MAST3O60307 1309 aa17.28■□□□□ 0.36
CCT3-201ENST00000295688 U2AF2P26368 475 aaKnown RBP eCLIP17.28■□□□□ 0.362e-7■■□□□ 13.4
CCT3-201ENST00000295688 FOSBP53539 338 aa17.28■□□□□ 0.36
CCT3-201ENST00000295688 NYAP1Q6ZVC0 841 aa17.28■□□□□ 0.36
CCT3-201ENST00000295688 BRAPQ7Z569 592 aa17.28■□□□□ 0.36
CCT3-201ENST00000295688 ZHX1Q9UKY1 873 aaPredicted RBP17.28■□□□□ 0.36
CCT3-201ENST00000295688 PKD1L3Q7Z443 1732 aa17.27■□□□□ 0.36
CCT3-201ENST00000295688 NRDCO43847 1150 aa17.27■□□□□ 0.36
CCT3-201ENST00000295688 CSB-PGBD3P0DP91 1061 aa17.27■□□□□ 0.36
CCT3-201ENST00000295688 TIMM10P62072 90 aa17.27■□□□□ 0.36
CCT3-201ENST00000295688 STK38Q15208 465 aa17.27■□□□□ 0.36
CCT3-201ENST00000295688 AOPEPQ8N6M6 819 aa17.27■□□□□ 0.36
CCT3-201ENST00000295688 FTOQ9C0B1 505 aaKnown RBP eCLIP17.27■□□□□ 0.36
CCT3-201ENST00000295688 OSBPL5Q9H0X9 879 aaPredicted RBP17.27■□□□□ 0.36
CCT3-201ENST00000295688 C1orf167Q5SNV9 1468 aa17.27■□□□□ 0.36
CCT3-201ENST00000295688 TUBB4AP04350 444 aa17.26■□□□□ 0.35
CCT3-201ENST00000295688 IMMTQ16891 758 aaKnown RBP17.26■□□□□ 0.35
CCT3-201ENST00000295688 CCDC191Q8NCU4 936 aa17.26■□□□□ 0.35
CCT3-201ENST00000295688 NCOA5Q9HCD5 579 aaKnown RBP17.26■□□□□ 0.35
CCT3-201ENST00000295688 POLR3EQ9NVU0 708 aa17.26■□□□□ 0.35
CCT3-201ENST00000295688 PIP4K2AP48426 406 aaPredicted RBP17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms