RNA–Protein interactions for RNA: ENST00000295549.8

LINC01116-201, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 2 BASIC

Gene LINC01116, Length 1,407 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-201ENST00000295549 RIMBP2O15034 1052 aa27.87■■■□□ 2.05
LINC01116-201ENST00000295549 SLC5A1P13866 664 aa27.87■■■□□ 2.05
LINC01116-201ENST00000295549 KLRK1P26718 216 aa27.87■■■□□ 2.05
LINC01116-201ENST00000295549 TXNRD3Q86VQ6 643 aa27.87■■■□□ 2.05
LINC01116-201ENST00000295549 A0A1B0GUL6 1792 aa27.87■■■□□ 2.05
LINC01116-201ENST00000295549 C9orf131Q5VYM1 1079 aa27.86■■■□□ 2.05
LINC01116-201ENST00000295549 JDP2Q8WYK2 163 aa27.85■■■□□ 2.05
LINC01116-201ENST00000295549 LRRCC1Q9C099 1032 aa27.85■■■□□ 2.05
LINC01116-201ENST00000295549 RNF181Q9P0P0 153 aa27.85■■■□□ 2.05
LINC01116-201ENST00000295549 A0A1B0GUL7 405 aa27.84■■■□□ 2.05
LINC01116-201ENST00000295549 APBB1O00213 710 aa27.84■■■□□ 2.05
LINC01116-201ENST00000295549 TIMM10P62072 90 aa27.84■■■□□ 2.05
LINC01116-201ENST00000295549 TNNI3KQ59H18 835 aa27.84■■■□□ 2.05
LINC01116-201ENST00000295549 FPGT-TNNI3KV9GXZ4 949 aa27.84■■■□□ 2.05
LINC01116-201ENST00000295549 SMC5Q8IY18 1101 aa27.84■■■□□ 2.05
LINC01116-201ENST00000295549 FAM84BQ96KN1 310 aaPredicted RBP27.84■■■□□ 2.05
LINC01116-201ENST00000295549 NIM1KQ8IY84 436 aa27.83■■■□□ 2.05
LINC01116-201ENST00000295549 COA1Q9GZY4 146 aa27.83■■■□□ 2.05
LINC01116-201ENST00000295549 ZNF609O15014 1411 aa27.82■■■□□ 2.04
LINC01116-201ENST00000295549 CAVIN4Q5BKX8 364 aa27.82■■■□□ 2.04
LINC01116-201ENST00000295549 ZNF804AQ7Z570 1209 aa27.82■■■□□ 2.04
LINC01116-201ENST00000295549 FBXO33Q7Z6M2 555 aa27.82■■■□□ 2.04
LINC01116-201ENST00000295549 CLASRPQ8N2M8 674 aaKnown RBP27.82■■■□□ 2.04
LINC01116-201ENST00000295549 EAF2Q96CJ1 260 aaPredicted RBP27.82■■■□□ 2.04
LINC01116-201ENST00000295549 IL1RAPL2Q9NP60 686 aa27.82■■■□□ 2.04
LINC01116-201ENST00000295549 SBF1O95248 1867 aa27.81■■■□□ 2.04
LINC01116-201ENST00000295549 HIBADHP31937 336 aaKnown RBP27.81■■■□□ 2.04
LINC01116-201ENST00000295549 DOK7Q18PE1 504 aa27.81■■■□□ 2.04
LINC01116-201ENST00000295549 PODNQ7Z5L7 613 aa27.81■■■□□ 2.04
LINC01116-201ENST00000295549 XAGE2Q96GT9 111 aa27.81■■■□□ 2.04
LINC01116-201ENST00000295549 NEUROD6Q96NK8 337 aa27.81■■■□□ 2.04
LINC01116-201ENST00000295549 ZNRF3Q9ULT6 936 aa27.81■■■□□ 2.04
LINC01116-201ENST00000295549 COL4A5P29400 1685 aa27.8■■■□□ 2.04
LINC01116-201ENST00000295549 ZC3H4Q9UPT8 1303 aaKnown RBP27.8■■■□□ 2.04
LINC01116-201ENST00000295549 G3V3G9 751 aa27.8■■■□□ 2.04
LINC01116-201ENST00000295549 FZD9O00144 591 aa27.8■■■□□ 2.04
LINC01116-201ENST00000295549 GYG1P46976 350 aa27.8■■■□□ 2.04
LINC01116-201ENST00000295549 DCAF8Q5TAQ9 597 aa27.8■■■□□ 2.04
LINC01116-201ENST00000295549 DBNDD1Q9H9R9 158 aa27.8■■■□□ 2.04
LINC01116-201ENST00000295549 ECE2O60344 883 aa27.79■■■□□ 2.04
LINC01116-201ENST00000295549 VPS37DQ86XT2 251 aa27.79■■■□□ 2.04
LINC01116-201ENST00000295549 CD209Q9NNX6 404 aa27.79■■■□□ 2.04
LINC01116-201ENST00000295549 IL1R1P14778 569 aa27.78■■■□□ 2.04
LINC01116-201ENST00000295549 ADORA1P30542 326 aa27.78■■■□□ 2.04
LINC01116-201ENST00000295549 BCAMP50895 628 aa27.78■■■□□ 2.04
LINC01116-201ENST00000295549 AACSQ86V21 672 aa27.78■■■□□ 2.04
LINC01116-201ENST00000295549 YDJCA8MPS7 323 aa27.76■■■□□ 2.04
LINC01116-201ENST00000295549 SMARCA5O60264 1052 aaPredicted RBP27.76■■■□□ 2.04
LINC01116-201ENST00000295549 ZBTB22O15209 634 aa27.75■■■□□ 2.03
LINC01116-201ENST00000295549 ANKRD45Q5TZF3 282 aa27.75■■■□□ 2.03
LINC01116-201ENST00000295549 CCDC102BQ68D86 513 aa27.75■■■□□ 2.03
LINC01116-201ENST00000295549 TDRD7Q8NHU6 1098 aaKnown RBP27.75■■■□□ 2.03
LINC01116-201ENST00000295549 DBNDD2Q9BQY9 259 aa27.75■■■□□ 2.03
LINC01116-201ENST00000295549 CCDC8Q9H0W5 538 aaPredicted RBP27.75■■■□□ 2.03
LINC01116-201ENST00000295549 DBNLQ9UJU6 430 aaKnown RBP27.75■■■□□ 2.03
LINC01116-201ENST00000295549 IFIT2P09913 472 aaKnown RBP27.75■■■□□ 2.03
LINC01116-201ENST00000295549 GORABQ5T7V8 394 aa27.75■■■□□ 2.03
LINC01116-201ENST00000295549 DICER1Q9UPY3 1922 aaKnown RBP27.74■■■□□ 2.03
LINC01116-201ENST00000295549 CCDC88AQ3V6T2 1871 aa27.74■■■□□ 2.03
LINC01116-201ENST00000295549 GNL3LQ9NVN8 582 aaKnown RBP27.74■■■□□ 2.03
LINC01116-201ENST00000295549 PPP4R2Q9NY27 417 aa27.74■■■□□ 2.03
LINC01116-201ENST00000295549 ZBTB47Q9UFB7 747 aaPredicted RBP27.74■■■□□ 2.03
LINC01116-201ENST00000295549 PHKA1P46020 1223 aa27.73■■■□□ 2.03
LINC01116-201ENST00000295549 EIF6P56537 245 aaKnown RBP27.73■■■□□ 2.03
LINC01116-201ENST00000295549 CCDC136Q96JN2 1154 aa27.73■■■□□ 2.03
LINC01116-201ENST00000295549 TLR7Q9NYK1 1049 aaKnown RBP27.73■■■□□ 2.03
LINC01116-201ENST00000295549 NUCB1Q02818 461 aa27.72■■■□□ 2.03
LINC01116-201ENST00000295549 CXCL9Q07325 125 aa27.72■■■□□ 2.03
LINC01116-201ENST00000295549 CCDC158Q5M9N0 1113 aa27.72■■■□□ 2.03
LINC01116-201ENST00000295549 KCNQ5Q9NR82 932 aa27.72■■■□□ 2.03
LINC01116-201ENST00000295549 KDM2BQ8NHM5 1336 aa27.71■■■□□ 2.03
LINC01116-201ENST00000295549 B4GALNT3Q6L9W6 998 aa27.71■■■□□ 2.03
LINC01116-201ENST00000295549 ARAP2Q8WZ64 1704 aa27.71■■■□□ 2.03
LINC01116-201ENST00000295549 SEMA3EO15041 775 aa27.7■■■□□ 2.03
LINC01116-201ENST00000295549 CIAPIN1Q6FI81 312 aa27.7■■■□□ 2.03
LINC01116-201ENST00000295549 ZNF512BQ96KM6 892 aaPredicted RBP27.7■■■□□ 2.03
LINC01116-201ENST00000295549 USP17L3A6NCW0 530 aa27.69■■■□□ 2.02
LINC01116-201ENST00000295549 USP17L4A6NCW7 530 aa27.69■■■□□ 2.02
LINC01116-201ENST00000295549 RAD17O75943 681 aa27.69■■■□□ 2.02
LINC01116-201ENST00000295549 ARID4AP29374 1257 aaPredicted RBP27.69■■■□□ 2.02
LINC01116-201ENST00000295549 TNIP1Q15025 636 aa27.69■■■□□ 2.02
LINC01116-201ENST00000295549 STRIP1Q5VSL9 837 aa27.69■■■□□ 2.02
LINC01116-201ENST00000295549 CENPQQ7L2Z9 268 aaPredicted RBP27.69■■■□□ 2.02
LINC01116-201ENST00000295549 USP17L1Q7RTZ2 530 aa27.69■■■□□ 2.02
LINC01116-201ENST00000295549 CHD1LQ86WJ1 897 aa27.69■■■□□ 2.02
LINC01116-201ENST00000295549 BCL11AQ9H165 835 aa27.69■■■□□ 2.02
LINC01116-201ENST00000295549 ZNF541Q9H0D2 1346 aa27.69■■■□□ 2.02
LINC01116-201ENST00000295549 FRAT2O75474 233 aaPredicted RBP27.68■■■□□ 2.02
LINC01116-201ENST00000295549 UQCRFS1P1P0C7P4 283 aa27.68■■■□□ 2.02
LINC01116-201ENST00000295549 TTLL5Q6EMB2 1281 aa27.68■■■□□ 2.02
LINC01116-201ENST00000295549 DPY19L2Q6NUT2 758 aa27.68■■■□□ 2.02
LINC01116-201ENST00000295549 IQSEC3Q9UPP2 1182 aaPredicted RBP27.68■■■□□ 2.02
LINC01116-201ENST00000295549 FAM205AQ6ZU69 1335 aa27.68■■■□□ 2.02
LINC01116-201ENST00000295549 CHD4Q14839 1912 aa27.68■■■□□ 2.02
LINC01116-201ENST00000295549 VIL1P09327 827 aaKnown RBP27.67■■■□□ 2.02
LINC01116-201ENST00000295549 TTC39AQ5SRH9 613 aa27.67■■■□□ 2.02
LINC01116-201ENST00000295549 GPC2Q8N158 579 aa27.67■■■□□ 2.02
LINC01116-201ENST00000295549 DENND2AQ9ULE3 1009 aa27.67■■■□□ 2.02
LINC01116-201ENST00000295549 PSMD14O00487 310 aa27.67■■■□□ 2.02
LINC01116-201ENST00000295549 GTF2IP78347 998 aa27.67■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms