RNA–Protein interactions for RNA: ENST00000294119.6

UBXN1-201, Transcript of UBX domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene UBXN1, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-201ENST00000294119 PTCH2Q9Y6C5 1203 aa20.44■□□□□ 0.86
UBXN1-201ENST00000294119 SSC5DA1L4H1 1573 aa20.43■□□□□ 0.86
UBXN1-201ENST00000294119 TESPA1A2RU30 521 aaPredicted RBP20.43■□□□□ 0.86
UBXN1-201ENST00000294119 SLC9C1Q4G0N8 1177 aa20.43■□□□□ 0.86
UBXN1-201ENST00000294119 NBPF11Q86T75 865 aa20.43■□□□□ 0.86
UBXN1-201ENST00000294119 GGA1Q9UJY5 639 aa20.43■□□□□ 0.86
UBXN1-201ENST00000294119 ANGEL1Q9UNK9 670 aaKnown RBP20.43■□□□□ 0.86
UBXN1-201ENST00000294119 SPTBN5Q9NRC6 3674 aaKnown RBP20.43■□□□□ 0.86
UBXN1-201ENST00000294119 COL1A1P02452 1464 aaPredicted RBP20.43■□□□□ 0.86
UBXN1-201ENST00000294119 UNCXA6NJT0 531 aa20.42■□□□□ 0.86
UBXN1-201ENST00000294119 XAGE3Q8WTP9 111 aa20.42■□□□□ 0.86
UBXN1-201ENST00000294119 ZBED3Q96IU2 234 aaPredicted RBP20.42■□□□□ 0.86
UBXN1-201ENST00000294119 CFAP53Q96M91 514 aa20.42■□□□□ 0.86
UBXN1-201ENST00000294119 PTPN18Q99952 460 aa20.42■□□□□ 0.86
UBXN1-201ENST00000294119 PRKRIP1Q9H875 184 aaPredicted RBP20.42■□□□□ 0.86
UBXN1-201ENST00000294119 A0A1W2PPC1 479 aa20.41■□□□□ 0.86
UBXN1-201ENST00000294119 PRKG1Q13976 671 aa20.41■□□□□ 0.86
UBXN1-201ENST00000294119 SLC4A8Q2Y0W8 1093 aa20.41■□□□□ 0.86
UBXN1-201ENST00000294119 DACT2Q5SW24 774 aa20.41■□□□□ 0.86
UBXN1-201ENST00000294119 UBE2Q1Q7Z7E8 422 aa20.41■□□□□ 0.86
UBXN1-201ENST00000294119 SHISA4Q96DD7 197 aa20.41■□□□□ 0.86
UBXN1-201ENST00000294119 SLC10A4Q96EP9 437 aa20.41■□□□□ 0.86
UBXN1-201ENST00000294119 FAM89AQ96GI7 184 aa20.41■□□□□ 0.86
UBXN1-201ENST00000294119 CLMNQ96JQ2 1002 aa20.41■□□□□ 0.86
UBXN1-201ENST00000294119 ISCA1Q9BUE6 129 aa20.41■□□□□ 0.86
UBXN1-201ENST00000294119 FZD1Q9UP38 647 aa20.41■□□□□ 0.86
UBXN1-201ENST00000294119 G3V3G9 751 aa20.4■□□□□ 0.86
UBXN1-201ENST00000294119 SOX1O00570 391 aaPredicted RBP20.4■□□□□ 0.86
UBXN1-201ENST00000294119 GJA5P36382 358 aa20.4■□□□□ 0.86
UBXN1-201ENST00000294119 DCAF8Q5TAQ9 597 aa20.4■□□□□ 0.86
UBXN1-201ENST00000294119 APOBEC3FQ8IUX4 373 aaKnown RBP20.4■□□□□ 0.86
UBXN1-201ENST00000294119 MMP14P50281 582 aa20.39■□□□□ 0.85
UBXN1-201ENST00000294119 WTIPA6NIX2 430 aaPredicted RBP20.38■□□□□ 0.85
UBXN1-201ENST00000294119 EIF2S2P20042 333 aaKnown RBP20.38■□□□□ 0.85
UBXN1-201ENST00000294119 OTUD7BQ6GQQ9 843 aa20.38■□□□□ 0.85
UBXN1-201ENST00000294119 ANKIB1Q9P2G1 1089 aa20.38■□□□□ 0.85
UBXN1-201ENST00000294119 SASH1O94885 1247 aa20.37■□□□□ 0.85
UBXN1-201ENST00000294119 AIMP1Q12904 312 aaKnown RBP20.37■□□□□ 0.85
UBXN1-201ENST00000294119 ZNF428Q96B54 188 aa20.37■□□□□ 0.85
UBXN1-201ENST00000294119 MXD3Q9BW11 206 aa20.37■□□□□ 0.85
UBXN1-201ENST00000294119 SEC31BQ9NQW1 1179 aa20.37■□□□□ 0.85
UBXN1-201ENST00000294119 MYO3BQ8WXR4 1341 aa20.36■□□□□ 0.85
UBXN1-201ENST00000294119 CNGB1Q14028 1251 aaPredicted RBP20.36■□□□□ 0.85
UBXN1-201ENST00000294119 OGFOD1Q8N543 542 aa20.36■□□□□ 0.85
UBXN1-201ENST00000294119 XDHP47989 1333 aa20.35■□□□□ 0.85
UBXN1-201ENST00000294119 LRCH3Q96II8 777 aa20.35■□□□□ 0.85
UBXN1-201ENST00000294119 CCER2I3L3R5 266 aa20.34■□□□□ 0.85
UBXN1-201ENST00000294119 IRS4O14654 1257 aaPredicted RBP20.34■□□□□ 0.85
UBXN1-201ENST00000294119 TRIM28Q13263 835 aaKnown RBP20.34■□□□□ 0.85
UBXN1-201ENST00000294119 ARHGEF6Q15052 776 aa20.34■□□□□ 0.85
UBXN1-201ENST00000294119 STRIP1Q5VSL9 837 aa20.34■□□□□ 0.85
UBXN1-201ENST00000294119 DPF3Q92784 378 aa20.34■□□□□ 0.85
UBXN1-201ENST00000294119 PLEKHF1Q96S99 279 aa20.34■□□□□ 0.85
UBXN1-201ENST00000294119 DEFB129Q9H1M3 183 aa20.34■□□□□ 0.85
UBXN1-201ENST00000294119 MED23Q9ULK4 1368 aa20.34■□□□□ 0.85
UBXN1-201ENST00000294119 MYBBP1AQ9BQG0 1328 aaKnown RBP20.33■□□□□ 0.85
UBXN1-201ENST00000294119 ZSWIM8A7E2V4 1837 aa20.33■□□□□ 0.85
UBXN1-201ENST00000294119 ZBTB7BO15156 539 aaPredicted RBP20.33■□□□□ 0.85
UBXN1-201ENST00000294119 MIER1Q8N108 512 aa20.33■□□□□ 0.85
UBXN1-201ENST00000294119 PLBD2Q8NHP8 589 aa20.33■□□□□ 0.85
UBXN1-201ENST00000294119 SH3TC2Q8TF17 1288 aa20.33■□□□□ 0.85
UBXN1-201ENST00000294119 MS4A4AQ96JQ5 239 aa20.33■□□□□ 0.85
UBXN1-201ENST00000294119 COL25A1Q9BXS0 654 aaPredicted RBP20.33■□□□□ 0.85
UBXN1-201ENST00000294119 ATP2B4P23634 1241 aa20.32■□□□□ 0.84
UBXN1-201ENST00000294119 PPP2R1AP30153 589 aa20.32■□□□□ 0.84
UBXN1-201ENST00000294119 NFE2L2Q16236 605 aa20.32■□□□□ 0.84
UBXN1-201ENST00000294119 GPR153Q6NV75 609 aa20.32■□□□□ 0.84
UBXN1-201ENST00000294119 TSPYL4Q9UJ04 414 aa20.32■□□□□ 0.84
UBXN1-201ENST00000294119 OTOFQ9HC10 1997 aa20.32■□□□□ 0.84
UBXN1-201ENST00000294119 PPP1R12BO60237 982 aaPredicted RBP20.31■□□□□ 0.84
UBXN1-201ENST00000294119 BABAM1Q9NWV8 329 aa20.31■□□□□ 0.84
UBXN1-201ENST00000294119 PPP2R3BQ9Y5P8 575 aa20.31■□□□□ 0.84
UBXN1-201ENST00000294119 ECM29Q5VYK3 1845 aa20.31■□□□□ 0.84
UBXN1-201ENST00000294119 EYSQ5T1H1 3165 aa20.31■□□□□ 0.84
UBXN1-201ENST00000294119 MYCP01106 439 aaPredicted RBP20.3■□□□□ 0.84
UBXN1-201ENST00000294119 ATP5J2-PTCD1G3V325 749 aa20.29■□□□□ 0.84
UBXN1-201ENST00000294119 MTFR1Q15390 333 aa20.29■□□□□ 0.84
UBXN1-201ENST00000294119 RTL5Q5HYW3 569 aaPredicted RBP20.29■□□□□ 0.84
UBXN1-201ENST00000294119 HTATIP2Q9BUP3 242 aa20.29■□□□□ 0.84
UBXN1-201ENST00000294119 STXBP5LQ9Y2K9 1186 aa20.29■□□□□ 0.84
UBXN1-201ENST00000294119 NR2E3Q9Y5X4 410 aa20.29■□□□□ 0.84
UBXN1-201ENST00000294119 USP2O75604 605 aaPredicted RBP20.28■□□□□ 0.84
UBXN1-201ENST00000294119 ANKRD13DQ6ZTN6 518 aa20.28■□□□□ 0.84
UBXN1-201ENST00000294119 BRI3BPQ8WY22 251 aa20.28■□□□□ 0.84
UBXN1-201ENST00000294119 ZNF804BA4D1E1 1349 aa20.27■□□□□ 0.84
UBXN1-201ENST00000294119 GJA8P48165 433 aa20.27■□□□□ 0.84
UBXN1-201ENST00000294119 MTMR14Q8NCE2 650 aa20.27■□□□□ 0.84
UBXN1-201ENST00000294119 ARHGAP39Q9C0H5 1083 aa20.27■□□□□ 0.84
UBXN1-201ENST00000294119 MUC3AQ02505 3323 aa20.27■□□□□ 0.83
UBXN1-201ENST00000294119 LAMA2P24043 3122 aaKnown RBP20.26■□□□□ 0.83
UBXN1-201ENST00000294119 GNRH1P01148 92 aa20.26■□□□□ 0.83
UBXN1-201ENST00000294119 PRMT2P55345 433 aa20.26■□□□□ 0.83
UBXN1-201ENST00000294119 ANKRD13AQ8IZ07 590 aa20.26■□□□□ 0.83
UBXN1-201ENST00000294119 ZBTB38Q8NAP3 1195 aaPredicted RBP20.26■□□□□ 0.83
UBXN1-201ENST00000294119 NKX2-3Q8TAU0 364 aa20.26■□□□□ 0.83
UBXN1-201ENST00000294119 COA1Q9GZY4 146 aa20.26■□□□□ 0.83
UBXN1-201ENST00000294119 ZFYVE28Q9HCC9 887 aa20.26■□□□□ 0.83
UBXN1-201ENST00000294119 TAF1CQ15572 869 aaPredicted RBP20.25■□□□□ 0.83
UBXN1-201ENST00000294119 CCDC152Q4G0S7 254 aa20.25■□□□□ 0.83
UBXN1-201ENST00000294119 KIAA0825Q8IV33 1275 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms