RNA–Protein interactions for RNA: ENST00000289577.9

TMED4-201, Transcript of transmembrane p24 trafficking protein 4, humanhuman

TSL 2 BASIC

Gene TMED4, Length 2,203 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED4-201ENST00000289577 FMR1NBQ8N0W7 255 aaPredicted RBP23.81■■□□□ 1.4
TMED4-201ENST00000289577 NAT10Q9H0A0 1025 aaKnown RBP23.81■■□□□ 1.4
TMED4-201ENST00000289577 OSBPL5Q9H0X9 879 aaPredicted RBP23.81■■□□□ 1.4
TMED4-201ENST00000289577 SLC52A2Q9HAB3 445 aa23.81■■□□□ 1.4
TMED4-201ENST00000289577 FER1L4A9Z1Z3 1794 aa23.81■■□□□ 1.4
TMED4-201ENST00000289577 GSDMDP57764 484 aa23.8■■□□□ 1.4
TMED4-201ENST00000289577 FILIP1Q7Z7B0 1213 aa23.8■■□□□ 1.4
TMED4-201ENST00000289577 ZNF274Q96GC6 653 aaPredicted RBP23.8■■□□□ 1.4
TMED4-201ENST00000289577 ZNF215Q9UL58 517 aaPredicted RBP23.8■■□□□ 1.4
TMED4-201ENST00000289577 AXIN2Q9Y2T1 843 aa23.8■■□□□ 1.4
TMED4-201ENST00000289577 SCN11AQ9UI33 1791 aa23.8■■□□□ 1.4
TMED4-201ENST00000289577 FOSBP53539 338 aa23.8■■□□□ 1.4
TMED4-201ENST00000289577 ZNF397Q8NF99 534 aaPredicted RBP23.8■■□□□ 1.4
TMED4-201ENST00000289577 KDM6AO15550 1401 aaPredicted RBP23.8■■□□□ 1.4
TMED4-201ENST00000289577 A0A087WWV3 80 aa23.79■■□□□ 1.4
TMED4-201ENST00000289577 ME1P48163 572 aa23.79■■□□□ 1.4
TMED4-201ENST00000289577 CCT2P78371 535 aaKnown RBP23.79■■□□□ 1.4
TMED4-201ENST00000289577 AOPEPQ8N6M6 819 aa23.79■■□□□ 1.4
TMED4-201ENST00000289577 IMPACTQ9P2X3 320 aa23.79■■□□□ 1.4
TMED4-201ENST00000289577 AFDNP55196 1824 aaKnown RBP23.79■■□□□ 1.4
TMED4-201ENST00000289577 PDIA3P30101 505 aaKnown RBP23.79■■□□□ 1.4
TMED4-201ENST00000289577 UBE3BQ7Z3V4 1068 aa23.79■■□□□ 1.4
TMED4-201ENST00000289577 NBPF11Q86T75 865 aa23.79■■□□□ 1.4
TMED4-201ENST00000289577 ERO1AQ96HE7 468 aa23.79■■□□□ 1.4
TMED4-201ENST00000289577 RTEL1Q9NZ71 1219 aa23.79■■□□□ 1.4
TMED4-201ENST00000289577 A0A1W2PQ27 194 aa23.78■■□□□ 1.4
TMED4-201ENST00000289577 A0A1W2PQ64 194 aa23.78■■□□□ 1.4
TMED4-201ENST00000289577 A0A1W2PQD8 194 aa23.78■■□□□ 1.4
TMED4-201ENST00000289577 KIF2AO00139 706 aaPredicted RBP23.78■■□□□ 1.4
TMED4-201ENST00000289577 CASP7P55210 303 aa23.78■■□□□ 1.4
TMED4-201ENST00000289577 ADALQ6DHV7 355 aa23.78■■□□□ 1.4
TMED4-201ENST00000289577 MRPS27Q92552 414 aaKnown RBP23.78■■□□□ 1.4
TMED4-201ENST00000289577 CHMP4CQ96CF2 233 aa23.78■■□□□ 1.4
TMED4-201ENST00000289577 PCDHA7Q9UN72 937 aa23.78■■□□□ 1.4
TMED4-201ENST00000289577 E7EWF7 191 aa23.78■■□□□ 1.4
TMED4-201ENST00000289577 ZMYM1Q5SVZ6 1142 aa23.78■■□□□ 1.4
TMED4-201ENST00000289577 BPIFA3Q9BQP9 254 aa23.78■■□□□ 1.4
TMED4-201ENST00000289577 NCOA5Q9HCD5 579 aaKnown RBP23.78■■□□□ 1.4
TMED4-201ENST00000289577 KMT5BQ4FZB7 885 aa23.77■■□□□ 1.4
TMED4-201ENST00000289577 FBXL16Q8N461 479 aa23.77■■□□□ 1.4
TMED4-201ENST00000289577 ZNF496Q96IT1 587 aaPredicted RBP23.77■■□□□ 1.4
TMED4-201ENST00000289577 FAM53CQ9NYF3 392 aa23.77■■□□□ 1.4
TMED4-201ENST00000289577 CARMIL3Q8ND23 1372 aa23.77■■□□□ 1.4
TMED4-201ENST00000289577 SLFNL1Q499Z3 407 aa23.76■■□□□ 1.39
TMED4-201ENST00000289577 TRMT1Q9NXH9 659 aaKnown RBP23.76■■□□□ 1.39
TMED4-201ENST00000289577 FDPSP14324 419 aaKnown RBP23.76■■□□□ 1.39
TMED4-201ENST00000289577 EVCP57679 992 aa23.76■■□□□ 1.39
TMED4-201ENST00000289577 RBM33Q96EV2 1170 aaKnown RBP23.76■■□□□ 1.39
TMED4-201ENST00000289577 PAG1Q9NWQ8 432 aa23.76■■□□□ 1.39
TMED4-201ENST00000289577 HSPD1P10809 573 aaKnown RBP23.75■■□□□ 1.39
TMED4-201ENST00000289577 ARFGEF2Q9Y6D5 1785 aa23.75■■□□□ 1.39
TMED4-201ENST00000289577 ERBB3P21860 1342 aa23.75■■□□□ 1.39
TMED4-201ENST00000289577 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP23.75■■□□□ 1.39
TMED4-201ENST00000289577 GOLIM4O00461 696 aa23.75■■□□□ 1.39
TMED4-201ENST00000289577 GUCY1B3Q02153 619 aa23.75■■□□□ 1.39
TMED4-201ENST00000289577 NFATC2IPQ8NCF5 419 aa23.75■■□□□ 1.39
TMED4-201ENST00000289577 A0A087WZG4 1122 aa23.74■■□□□ 1.39
TMED4-201ENST00000289577 A0A0G2JLW4 131 aa23.74■■□□□ 1.39
TMED4-201ENST00000289577 SNRPA1P09661 255 aaKnown RBP23.74■■□□□ 1.39
TMED4-201ENST00000289577 ERCC4Q92889 916 aaPredicted RBP23.74■■□□□ 1.39
TMED4-201ENST00000289577 GPR108Q9NPR9 543 aa23.74■■□□□ 1.39
TMED4-201ENST00000289577 KIAA1468Q9P260 1216 aa23.74■■□□□ 1.39
TMED4-201ENST00000289577 NEDD4P46934 1319 aa23.74■■□□□ 1.39
TMED4-201ENST00000289577 TMEM94Q12767 1356 aa23.74■■□□□ 1.39
TMED4-201ENST00000289577 SLU7O95391 586 aaKnown RBP23.74■■□□□ 1.39
TMED4-201ENST00000289577 LINC00301Q8NCQ3 95 aa23.74■■□□□ 1.39
TMED4-201ENST00000289577 SDF4Q9BRK5 362 aa23.74■■□□□ 1.39
TMED4-201ENST00000289577 IGSF3O75054 1194 aa23.73■■□□□ 1.39
TMED4-201ENST00000289577 NDUFA8P51970 172 aa23.73■■□□□ 1.39
TMED4-201ENST00000289577 ATG9AQ7Z3C6 839 aa23.73■■□□□ 1.39
TMED4-201ENST00000289577 PHKG2P15735 406 aa23.72■■□□□ 1.39
TMED4-201ENST00000289577 KCNJ6P48051 423 aa23.72■■□□□ 1.39
TMED4-201ENST00000289577 E4F1Q66K89 784 aaPredicted RBP23.72■■□□□ 1.39
TMED4-201ENST00000289577 L2HGDHQ9H9P8 463 aa23.72■■□□□ 1.39
TMED4-201ENST00000289577 RGPD5Q99666 1765 aa23.72■■□□□ 1.39
TMED4-201ENST00000289577 A0A1B0GVL5 298 aa23.72■■□□□ 1.39
TMED4-201ENST00000289577 SLFN14P0C7P3 912 aa23.72■■□□□ 1.39
TMED4-201ENST00000289577 FOXO4P98177 505 aa23.72■■□□□ 1.39
TMED4-201ENST00000289577 LMBR1LQ6UX01 489 aa23.72■■□□□ 1.39
TMED4-201ENST00000289577 CCDC150Q8NCX0 1101 aa23.72■■□□□ 1.39
TMED4-201ENST00000289577 MAST3O60307 1309 aa23.72■■□□□ 1.39
TMED4-201ENST00000289577 ATP5J2-PTCD1G3V325 749 aa23.71■■□□□ 1.39
TMED4-201ENST00000289577 PTCD1O75127 700 aaKnown RBP23.71■■□□□ 1.39
TMED4-201ENST00000289577 DPCR1Q3MIW9 517 aa23.71■■□□□ 1.39
TMED4-201ENST00000289577 FBXO38Q6PIJ6 1188 aa23.71■■□□□ 1.39
TMED4-201ENST00000289577 KRT222Q8N1A0 295 aa23.71■■□□□ 1.39
TMED4-201ENST00000289577 PSDA5PKW4 1024 aaPredicted RBP23.71■■□□□ 1.39
TMED4-201ENST00000289577 YEATS4O95619 227 aa23.71■■□□□ 1.39
TMED4-201ENST00000289577 KCNG4Q8TDN1 519 aa23.71■■□□□ 1.39
TMED4-201ENST00000289577 POLR3EQ9NVU0 708 aa23.71■■□□□ 1.39
TMED4-201ENST00000289577 RNF113AO15541 343 aaKnown RBP23.7■■□□□ 1.38
TMED4-201ENST00000289577 DHX8Q14562 1220 aaKnown RBP23.7■■□□□ 1.38
TMED4-201ENST00000289577 ELF2Q15723 593 aa23.7■■□□□ 1.38
TMED4-201ENST00000289577 ARMCX5Q6P1M9 558 aa23.7■■□□□ 1.38
TMED4-201ENST00000289577 NOL12Q9UGY1 213 aaKnown RBP eCLIP23.7■■□□□ 1.389e-6■■□□□ 14.3
TMED4-201ENST00000289577 V9GYY5 206 aaPredicted RBP23.7■■□□□ 1.38
TMED4-201ENST00000289577 TRPM3Q9HCF6 1732 aaPredicted RBP23.7■■□□□ 1.38
TMED4-201ENST00000289577 PPFIA3O75145 1194 aa23.69■■□□□ 1.38
TMED4-201ENST00000289577 PIP4K2AP48426 406 aaPredicted RBP23.69■■□□□ 1.38
TMED4-201ENST00000289577 CHST3Q7LGC8 479 aa23.69■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms