RNA–Protein interactions for RNA: ENST00000288840.9

SMAD6-201, Transcript of SMAD family member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD6, Length 3,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-201ENST00000288840 SAFBQ15424 915 aaKnown RBP eCLIP18.54■□□□□ 0.56
SMAD6-201ENST00000288840 ZKSCAN3Q9BRR0 538 aa18.54■□□□□ 0.56
SMAD6-201ENST00000288840 ZSCAN16Q9H4T2 348 aaPredicted RBP18.54■□□□□ 0.56
SMAD6-201ENST00000288840 AKAP2Q9Y2D5 859 aa18.54■□□□□ 0.56
SMAD6-201ENST00000288840 LRP2BPQ9P2M1 347 aa18.54■□□□□ 0.56
SMAD6-201ENST00000288840 E7EWF7 191 aa18.54■□□□□ 0.56
SMAD6-201ENST00000288840 LMOD1P29536 600 aaPredicted RBP18.54■□□□□ 0.56
SMAD6-201ENST00000288840 DNAJC10Q8IXB1 793 aa18.54■□□□□ 0.56
SMAD6-201ENST00000288840 ANO10Q9NW15 660 aa18.54■□□□□ 0.56
SMAD6-201ENST00000288840 XAGE2Q96GT9 111 aa18.53■□□□□ 0.56
SMAD6-201ENST00000288840 RIMS1Q86UR5 1692 aaKnown RBP18.53■□□□□ 0.56
SMAD6-201ENST00000288840 CADPS2Q86UW7 1296 aa18.53■□□□□ 0.56
SMAD6-201ENST00000288840 CCDC69A6NI79 296 aa18.53■□□□□ 0.56
SMAD6-201ENST00000288840 CFAP100Q494V2 611 aa18.53■□□□□ 0.56
SMAD6-201ENST00000288840 TMC6Q7Z403 805 aa18.53■□□□□ 0.56
SMAD6-201ENST00000288840 NAPBQ9H115 298 aa18.53■□□□□ 0.56
SMAD6-201ENST00000288840 COPRSQ9NQ92 184 aa18.53■□□□□ 0.56
SMAD6-201ENST00000288840 TECPR2O15040 1411 aa18.52■□□□□ 0.56
SMAD6-201ENST00000288840 HSPD1P10809 573 aaKnown RBP18.52■□□□□ 0.56
SMAD6-201ENST00000288840 NUTM2BA6NNL0 878 aaPredicted RBP18.52■□□□□ 0.56
SMAD6-201ENST00000288840 NUTM2EB1AL46 878 aaPredicted RBP18.52■□□□□ 0.56
SMAD6-201ENST00000288840 SLC3A2P08195 630 aaKnown RBP18.52■□□□□ 0.56
SMAD6-201ENST00000288840 SPECC1Q5M775 1068 aa18.52■□□□□ 0.56
SMAD6-201ENST00000288840 NUTM2AQ8IVF1 878 aaPredicted RBP18.52■□□□□ 0.56
SMAD6-201ENST00000288840 IFIT3O14879 490 aaKnown RBP18.52■□□□□ 0.55
SMAD6-201ENST00000288840 SKILP12757 684 aa18.52■□□□□ 0.55
SMAD6-201ENST00000288840 PDIA4P13667 645 aaKnown RBP18.52■□□□□ 0.55
SMAD6-201ENST00000288840 MTX1Q13505 466 aa18.52■□□□□ 0.55
SMAD6-201ENST00000288840 STX1AQ16623 288 aa18.52■□□□□ 0.55
SMAD6-201ENST00000288840 MRVI1Q9Y6F6 885 aa18.52■□□□□ 0.55
SMAD6-201ENST00000288840 SPATA31D1Q6ZQQ2 1576 aa18.51■□□□□ 0.55
SMAD6-201ENST00000288840 ADAMTS2O95450 1211 aa18.51■□□□□ 0.55
SMAD6-201ENST00000288840 PTPN14Q15678 1187 aa18.51■□□□□ 0.55
SMAD6-201ENST00000288840 PTPN21Q16825 1174 aa18.51■□□□□ 0.55
SMAD6-201ENST00000288840 NCOA7Q8NI08 942 aa18.51■□□□□ 0.55
SMAD6-201ENST00000288840 PHKBQ93100 1093 aa18.51■□□□□ 0.55
SMAD6-201ENST00000288840 ZHX1Q9UKY1 873 aaPredicted RBP18.51■□□□□ 0.55
SMAD6-201ENST00000288840 RIOK3O14730 519 aaKnown RBP18.51■□□□□ 0.55
SMAD6-201ENST00000288840 ACSBG1Q96GR2 724 aa18.51■□□□□ 0.55
SMAD6-201ENST00000288840 SNAP23O00161 211 aa18.51■□□□□ 0.55
SMAD6-201ENST00000288840 KLHL10Q6JEL2 608 aa18.51■□□□□ 0.55
SMAD6-201ENST00000288840 OLFM4Q6UX06 510 aa18.51■□□□□ 0.55
SMAD6-201ENST00000288840 ZNF771Q7L3S4 317 aaPredicted RBP18.51■□□□□ 0.55
SMAD6-201ENST00000288840 SLC26A6Q9BXS9 759 aa18.51■□□□□ 0.55
SMAD6-201ENST00000288840 ANKRD18BA2A2Z9 1011 aa18.5■□□□□ 0.55
SMAD6-201ENST00000288840 METAP2P50579 478 aaKnown RBP eCLIP18.5■□□□□ 0.554e-6■■■■□ 22.5
SMAD6-201ENST00000288840 HAUS7Q99871 368 aa18.5■□□□□ 0.55
SMAD6-201ENST00000288840 CLSTN2Q9H4D0 955 aa18.5■□□□□ 0.55
SMAD6-201ENST00000288840 B4E1Z4 1266 aa18.5■□□□□ 0.55
SMAD6-201ENST00000288840 MIGA1Q8NAN2 632 aa18.5■□□□□ 0.55
SMAD6-201ENST00000288840 RAI14Q9P0K7 980 aa18.5■□□□□ 0.55
SMAD6-201ENST00000288840 TMEM67Q5HYA8 995 aa18.5■□□□□ 0.55
SMAD6-201ENST00000288840 ALG1Q9BT22 464 aa18.5■□□□□ 0.55
SMAD6-201ENST00000288840 VIRMAQ69YN4 1812 aaKnown RBP18.5■□□□□ 0.55
SMAD6-201ENST00000288840 MRPS27Q92552 414 aaKnown RBP18.49■□□□□ 0.55
SMAD6-201ENST00000288840 GOLGA8AA7E2F4 631 aa18.49■□□□□ 0.55
SMAD6-201ENST00000288840 PDIA6Q15084 440 aa18.49■□□□□ 0.55
SMAD6-201ENST00000288840 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.49■□□□□ 0.55
SMAD6-201ENST00000288840 GPAA1O43292 621 aa18.48■□□□□ 0.55
SMAD6-201ENST00000288840 EPB41L2O43491 1005 aaKnown RBP18.48■□□□□ 0.55
SMAD6-201ENST00000288840 IL2RBP14784 551 aa18.48■□□□□ 0.55
SMAD6-201ENST00000288840 ADD1P35611 737 aaKnown RBP18.48■□□□□ 0.55
SMAD6-201ENST00000288840 ARID5BQ14865 1188 aa18.48■□□□□ 0.55
SMAD6-201ENST00000288840 PGBD1Q96JS3 809 aa18.48■□□□□ 0.55
SMAD6-201ENST00000288840 CMTR1Q8N1G2 835 aaKnown RBP18.48■□□□□ 0.55
SMAD6-201ENST00000288840 ASAP1Q9ULH1 1129 aa18.48■□□□□ 0.55
SMAD6-201ENST00000288840 SPTLC2O15270 562 aa18.47■□□□□ 0.55
SMAD6-201ENST00000288840 OSBP2Q969R2 916 aa18.47■□□□□ 0.55
SMAD6-201ENST00000288840 DLG5Q8TDM6 1919 aa18.47■□□□□ 0.55
SMAD6-201ENST00000288840 ITGA6P23229 1130 aa18.47■□□□□ 0.55
SMAD6-201ENST00000288840 SFPQP23246 707 aaKnown RBP eCLIP18.47■□□□□ 0.55
SMAD6-201ENST00000288840 IARSP41252 1262 aaKnown RBP18.47■□□□□ 0.55
SMAD6-201ENST00000288840 MTERF4Q7Z6M4 381 aaKnown RBP18.47■□□□□ 0.55
SMAD6-201ENST00000288840 FGAP02671 866 aa18.47■□□□□ 0.55
SMAD6-201ENST00000288840 ZNF75DP51815 510 aa18.47■□□□□ 0.55
SMAD6-201ENST00000288840 SLC12A7Q9Y666 1083 aa18.47■□□□□ 0.55
SMAD6-201ENST00000288840 CEMIPQ8WUJ3 1361 aa18.47■□□□□ 0.55
SMAD6-201ENST00000288840 SART3Q15020 963 aaKnown RBP18.46■□□□□ 0.55
SMAD6-201ENST00000288840 STOX1Q6ZVD7 989 aa18.46■□□□□ 0.55
SMAD6-201ENST00000288840 KLHL34Q8N239 644 aa18.46■□□□□ 0.55
SMAD6-201ENST00000288840 PRIMPOLQ96LW4 560 aa18.46■□□□□ 0.55
SMAD6-201ENST00000288840 AIFM3Q96NN9 605 aa18.46■□□□□ 0.55
SMAD6-201ENST00000288840 AGLP35573 1532 aa18.46■□□□□ 0.55
SMAD6-201ENST00000288840 RIMBP3CA6NJZ7 1639 aa18.46■□□□□ 0.55
SMAD6-201ENST00000288840 RIMBP3BA6NNM3 1639 aa18.46■□□□□ 0.55
SMAD6-201ENST00000288840 RIMBP3Q9UFD9 1639 aa18.46■□□□□ 0.55
SMAD6-201ENST00000288840 M0R2C6 588 aa18.46■□□□□ 0.55
SMAD6-201ENST00000288840 IFNKQ9P0W0 207 aa18.46■□□□□ 0.55
SMAD6-201ENST00000288840 JAG2Q9Y219 1238 aa18.46■□□□□ 0.55
SMAD6-201ENST00000288840 IRS4O14654 1257 aaPredicted RBP18.46■□□□□ 0.55
SMAD6-201ENST00000288840 ST3GAL1Q11201 340 aa18.46■□□□□ 0.55
SMAD6-201ENST00000288840 C11orf57Q6ZUT1 292 aaPredicted RBP18.46■□□□□ 0.55
SMAD6-201ENST00000288840 ITSN1Q15811 1721 aa18.45■□□□□ 0.54
SMAD6-201ENST00000288840 TRIM22Q8IYM9 498 aa18.45■□□□□ 0.54
SMAD6-201ENST00000288840 NSUN7Q8NE18 718 aaKnown RBP18.45■□□□□ 0.54
SMAD6-201ENST00000288840 CPLX3Q8WVH0 158 aa18.45■□□□□ 0.54
SMAD6-201ENST00000288840 hCG_1642624A0A1W2PR95 340 aa18.45■□□□□ 0.54
SMAD6-201ENST00000288840 MNS1Q8NEH6 495 aa18.45■□□□□ 0.54
SMAD6-201ENST00000288840 UBAC1Q9BSL1 405 aa18.45■□□□□ 0.54
SMAD6-201ENST00000288840 HELLSQ9NRZ9 838 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms