RNA–Protein interactions for RNA: ENST00000268673.11

PDPK1-201, Transcript of 3-phosphoinositide dependent protein kinase 1, humanhuman

TSL 1 (best) BASIC

Gene PDPK1, Length 4,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPK1-201ENST00000268673 TEX13AQ9BXU3 409 aaPredicted RBP16.95■□□□□ 0.3
PDPK1-201ENST00000268673 NAPBQ9H115 298 aa16.95■□□□□ 0.3
PDPK1-201ENST00000268673 HAND2P61296 217 aa16.94■□□□□ 0.3
PDPK1-201ENST00000268673 LRRC8AQ8IWT6 810 aa16.94■□□□□ 0.3
PDPK1-201ENST00000268673 PYM1Q9BRP8 204 aaKnown RBP16.94■□□□□ 0.3
PDPK1-201ENST00000268673 YTHDC2Q9H6S0 1430 aaKnown RBP16.94■□□□□ 0.3
PDPK1-201ENST00000268673 PLA2R1Q13018 1463 aa16.94■□□□□ 0.3
PDPK1-201ENST00000268673 SNRPA1P09661 255 aaKnown RBP16.94■□□□□ 0.3
PDPK1-201ENST00000268673 ME3Q16798 604 aa16.94■□□□□ 0.3
PDPK1-201ENST00000268673 SAMD9LQ8IVG5 1584 aa16.94■□□□□ 0.3
PDPK1-201ENST00000268673 MINDY4BA8MYZ0 360 aa16.94■□□□□ 0.3
PDPK1-201ENST00000268673 IFIT3O14879 490 aaKnown RBP16.94■□□□□ 0.3
PDPK1-201ENST00000268673 APOBRQ0VD83 1088 aa16.94■□□□□ 0.3
PDPK1-201ENST00000268673 TTC6Q86TZ1 520 aa16.94■□□□□ 0.3
PDPK1-201ENST00000268673 TDRD7Q8NHU6 1098 aaKnown RBP16.94■□□□□ 0.3
PDPK1-201ENST00000268673 BABAM1Q9NWV8 329 aa16.94■□□□□ 0.3
PDPK1-201ENST00000268673 STAP2Q9UGK3 403 aa16.94■□□□□ 0.3
PDPK1-201ENST00000268673 TUBB2AQ13885 445 aa16.93■□□□□ 0.3
PDPK1-201ENST00000268673 TUBB2BQ9BVA1 445 aa16.93■□□□□ 0.3
PDPK1-201ENST00000268673 A0A1B0GUL7 405 aa16.93■□□□□ 0.3
PDPK1-201ENST00000268673 ANKRD18BA2A2Z9 1011 aa16.93■□□□□ 0.3
PDPK1-201ENST00000268673 ZFYP08048 801 aaPredicted RBP16.93■□□□□ 0.3
PDPK1-201ENST00000268673 HSP90AA4PQ58FG1 418 aa16.93■□□□□ 0.3
PDPK1-201ENST00000268673 MICU3Q86XE3 530 aa16.93■□□□□ 0.3
PDPK1-201ENST00000268673 FLT4P35916 1363 aa16.93■□□□□ 0.3
PDPK1-201ENST00000268673 ATP10AO60312 1499 aa16.93■□□□□ 0.3
PDPK1-201ENST00000268673 FANCCQ00597 558 aa16.93■□□□□ 0.3
PDPK1-201ENST00000268673 MAP3K12Q12852 859 aa16.93■□□□□ 0.3
PDPK1-201ENST00000268673 NAA16Q6N069 864 aaPredicted RBP16.93■□□□□ 0.3
PDPK1-201ENST00000268673 EDC4Q6P2E9 1401 aaKnown RBP16.93■□□□□ 0.3
PDPK1-201ENST00000268673 KARSQ15046 597 aaKnown RBP16.92■□□□□ 0.3
PDPK1-201ENST00000268673 RNF187Q5TA31 235 aaPredicted RBP16.92■□□□□ 0.3
PDPK1-201ENST00000268673 TMEM87AQ8NBN3 555 aa16.92■□□□□ 0.3
PDPK1-201ENST00000268673 LDHAL6AQ6ZMR3 332 aa16.92■□□□□ 0.3
PDPK1-201ENST00000268673 EBAG9O00559 213 aa16.92■□□□□ 0.3
PDPK1-201ENST00000268673 ARHGAP6O43182 974 aa16.92■□□□□ 0.3
PDPK1-201ENST00000268673 ANKRD13DQ6ZTN6 518 aa16.92■□□□□ 0.3
PDPK1-201ENST00000268673 MRVI1Q9Y6F6 885 aa16.92■□□□□ 0.3
PDPK1-201ENST00000268673 ERCC6LQ2NKX8 1250 aa16.92■□□□□ 0.3
PDPK1-201ENST00000268673 ALS2CR12Q96Q35 445 aa16.91■□□□□ 0.3
PDPK1-201ENST00000268673 NAA15Q9BXJ9 866 aaKnown RBP16.91■□□□□ 0.3
PDPK1-201ENST00000268673 ZSWIM6Q9HCJ5 1215 aa16.91■□□□□ 0.3
PDPK1-201ENST00000268673 PUF60Q9UHX1 559 aaKnown RBP16.91■□□□□ 0.3
PDPK1-201ENST00000268673 CDC25BP30305 580 aa16.91■□□□□ 0.3
PDPK1-201ENST00000268673 RAB11FIP4Q86YS3 637 aa16.91■□□□□ 0.3
PDPK1-201ENST00000268673 TMEM67Q5HYA8 995 aa16.91■□□□□ 0.3
PDPK1-201ENST00000268673 KIF2CQ99661 725 aa16.91■□□□□ 0.3
PDPK1-201ENST00000268673 JADE2Q9NQC1 790 aa16.91■□□□□ 0.3
PDPK1-201ENST00000268673 CWC25Q9NXE8 425 aaPredicted RBP16.91■□□□□ 0.3
PDPK1-201ENST00000268673 SSH3Q8TE77 659 aa16.91■□□□□ 0.3
PDPK1-201ENST00000268673 LZTFL1Q9NQ48 299 aa16.91■□□□□ 0.3
PDPK1-201ENST00000268673 NR1I2O75469 434 aa16.9■□□□□ 0.3
PDPK1-201ENST00000268673 OAS2P29728 719 aaKnown RBP16.9■□□□□ 0.3
PDPK1-201ENST00000268673 ZNF569Q5MCW4 686 aa16.9■□□□□ 0.3
PDPK1-201ENST00000268673 CCDC82Q8N4S0 544 aa16.9■□□□□ 0.3
PDPK1-201ENST00000268673 CTCFLQ8NI51 663 aaPredicted RBP16.9■□□□□ 0.3
PDPK1-201ENST00000268673 MICALL1Q8N3F8 863 aa16.9■□□□□ 0.3
PDPK1-201ENST00000268673 SLC26A6Q9BXS9 759 aa16.9■□□□□ 0.3
PDPK1-201ENST00000268673 ZHX3Q9H4I2 956 aa16.9■□□□□ 0.3
PDPK1-201ENST00000268673 PTCH1Q13635 1447 aa16.9■□□□□ 0.3
PDPK1-201ENST00000268673 BMP15O95972 392 aa16.89■□□□□ 0.3
PDPK1-201ENST00000268673 SLC5A1P13866 664 aa16.89■□□□□ 0.3
PDPK1-201ENST00000268673 RNF41Q9H4P4 317 aaPredicted RBP16.89■□□□□ 0.3
PDPK1-201ENST00000268673 RNF216Q9NWF9 866 aaPredicted RBP16.89■□□□□ 0.3
PDPK1-201ENST00000268673 ANKIB1Q9P2G1 1089 aa16.89■□□□□ 0.3
PDPK1-201ENST00000268673 MAP3K5Q99683 1374 aa16.89■□□□□ 0.3
PDPK1-201ENST00000268673 OPA1O60313 960 aa16.89■□□□□ 0.29
PDPK1-201ENST00000268673 PHACTR2O75167 634 aa16.89■□□□□ 0.29
PDPK1-201ENST00000268673 ETF1P62495 437 aaKnown RBP16.89■□□□□ 0.29
PDPK1-201ENST00000268673 GPR161Q8N6U8 529 aaKnown RBP16.89■□□□□ 0.29
PDPK1-201ENST00000268673 JARID2Q92833 1246 aaPredicted RBP16.89■□□□□ 0.29
PDPK1-201ENST00000268673 MYOM2P54296 1465 aa16.89■□□□□ 0.29
PDPK1-201ENST00000268673 ZBTB43O43298 467 aa16.89■□□□□ 0.29
PDPK1-201ENST00000268673 CYLC1P35663 651 aaPredicted RBP16.89■□□□□ 0.29
PDPK1-201ENST00000268673 NLRP12P59046 1061 aa16.89■□□□□ 0.29
PDPK1-201ENST00000268673 CHMP4BP1P59074 171 aa16.89■□□□□ 0.29
PDPK1-201ENST00000268673 FAM227BQ96M60 508 aa16.89■□□□□ 0.29
PDPK1-201ENST00000268673 TRPM2O94759 1503 aa16.89■□□□□ 0.29
PDPK1-201ENST00000268673 PRC1O43663 620 aa16.89■□□□□ 0.29
PDPK1-201ENST00000268673 HSF2BPO75031 334 aa16.89■□□□□ 0.29
PDPK1-201ENST00000268673 USP5P45974 858 aa16.89■□□□□ 0.29
PDPK1-201ENST00000268673 SNRKQ9NRH2 765 aa16.89■□□□□ 0.29
PDPK1-201ENST00000268673 RHOXF2BP0C7M4 288 aa16.88■□□□□ 0.29
PDPK1-201ENST00000268673 RHOXF2Q9BQY4 288 aa16.88■□□□□ 0.29
PDPK1-201ENST00000268673 SPTLC3Q9NUV7 552 aa16.88■□□□□ 0.29
PDPK1-201ENST00000268673 CYP2E1P05181 493 aaPredicted RBP16.88■□□□□ 0.29
PDPK1-201ENST00000268673 ZSCAN26Q16670 478 aa16.88■□□□□ 0.29
PDPK1-201ENST00000268673 IPO4Q8TEX9 1081 aaKnown RBP16.88■□□□□ 0.29
PDPK1-201ENST00000268673 AKR1B15C9JRZ8 316 aaPredicted RBP16.88■□□□□ 0.29
PDPK1-201ENST00000268673 SMC1AQ14683 1233 aaKnown RBP16.88■□□□□ 0.29
PDPK1-201ENST00000268673 EYA1Q99502 592 aa16.88■□□□□ 0.29
PDPK1-201ENST00000268673 XPO4Q9C0E2 1151 aaKnown RBP16.88■□□□□ 0.29
PDPK1-201ENST00000268673 MKNK2Q9HBH9 465 aa16.88■□□□□ 0.29
PDPK1-201ENST00000268673 ZNF287Q9HBT7 754 aa16.88■□□□□ 0.29
PDPK1-201ENST00000268673 PREX2Q70Z35 1606 aa16.88■□□□□ 0.29
PDPK1-201ENST00000268673 PSDA5PKW4 1024 aaPredicted RBP16.88■□□□□ 0.29
PDPK1-201ENST00000268673 MYO1BO43795 1136 aa16.88■□□□□ 0.29
PDPK1-201ENST00000268673 SLC39A6Q13433 755 aa16.88■□□□□ 0.29
PDPK1-201ENST00000268673 CNGA4Q8IV77 575 aa16.88■□□□□ 0.29
PDPK1-201ENST00000268673 TTF1Q15361 905 aaPredicted RBP16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms