RNA–Protein interactions for RNA: ENST00000268383.6

CDR2-201, Transcript of cerebellar degeneration related protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDR2, Length 2,702 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-201ENST00000268383 ILDR1Q86SU0 546 aaPredicted RBP26.01■■□□□ 1.76
CDR2-201ENST00000268383 ZBTB3Q9H5J0 574 aa26.01■■□□□ 1.76
CDR2-201ENST00000268383 SNW1Q13573 536 aaKnown RBP26.01■■□□□ 1.75
CDR2-201ENST00000268383 EXOSC10Q01780 885 aaKnown RBP26■■□□□ 1.75
CDR2-201ENST00000268383 KLHL34Q8N239 644 aa26■■□□□ 1.75
CDR2-201ENST00000268383 GJB4Q9NTQ9 266 aa26■■□□□ 1.75
CDR2-201ENST00000268383 MAST3O60307 1309 aa26■■□□□ 1.75
CDR2-201ENST00000268383 SH3TC1Q8TE82 1336 aa26■■□□□ 1.75
CDR2-201ENST00000268383 GOLGA6L19H0YKK7 550 aa26■■□□□ 1.75
CDR2-201ENST00000268383 M0R2C6 588 aa26■■□□□ 1.75
CDR2-201ENST00000268383 A1BGP04217 495 aa26■■□□□ 1.75
CDR2-201ENST00000268383 ME1P48163 572 aa26■■□□□ 1.75
CDR2-201ENST00000268383 PLBD2Q8NHP8 589 aa26■■□□□ 1.75
CDR2-201ENST00000268383 USP27XA6NNY8 438 aa25.99■■□□□ 1.75
CDR2-201ENST00000268383 DCAF5Q96JK2 942 aa25.99■■□□□ 1.75
CDR2-201ENST00000268383 DNAJC5Q9H3Z4 198 aa25.99■■□□□ 1.75
CDR2-201ENST00000268383 TNNT1P13805 278 aa25.99■■□□□ 1.75
CDR2-201ENST00000268383 ZNF592Q92610 1267 aa25.99■■□□□ 1.75
CDR2-201ENST00000268383 RCOR1Q9UKL0 485 aa25.99■■□□□ 1.75
CDR2-201ENST00000268383 ARFGEF2Q9Y6D5 1785 aa25.99■■□□□ 1.75
CDR2-201ENST00000268383 TRPM3Q9HCF6 1732 aaPredicted RBP25.99■■□□□ 1.75
CDR2-201ENST00000268383 PDIA3P30101 505 aaKnown RBP25.98■■□□□ 1.75
CDR2-201ENST00000268383 FKBP4Q02790 459 aaKnown RBP eCLIP25.98■■□□□ 1.75
CDR2-201ENST00000268383 U2AF2P26368 475 aaKnown RBP eCLIP25.98■■□□□ 1.754e-6■□□□□ 8.3
CDR2-201ENST00000268383 FILIP1Q7Z7B0 1213 aa25.98■■□□□ 1.75
CDR2-201ENST00000268383 PDCL2Q8N4E4 241 aa25.98■■□□□ 1.75
CDR2-201ENST00000268383 FSIP1Q8NA03 581 aa25.98■■□□□ 1.75
CDR2-201ENST00000268383 IFIT1P09914 478 aaKnown RBP25.97■■□□□ 1.75
CDR2-201ENST00000268383 ZMYM1Q5SVZ6 1142 aa25.97■■□□□ 1.75
CDR2-201ENST00000268383 TPD52L1Q16890 204 aaPredicted RBP25.97■■□□□ 1.75
CDR2-201ENST00000268383 PRDM4Q9UKN5 801 aa25.97■■□□□ 1.75
CDR2-201ENST00000268383 FDPSP14324 419 aaKnown RBP25.96■■□□□ 1.75
CDR2-201ENST00000268383 A0A1B0GUL7 405 aa25.96■■□□□ 1.75
CDR2-201ENST00000268383 A0A1B0GVL5 298 aa25.96■■□□□ 1.75
CDR2-201ENST00000268383 H7C1W4 665 aa25.96■■□□□ 1.75
CDR2-201ENST00000268383 CCDC73Q6ZRK6 1079 aa25.96■■□□□ 1.75
CDR2-201ENST00000268383 OSBP2Q969R2 916 aa25.96■■□□□ 1.75
CDR2-201ENST00000268383 LLPHQ9BRT6 129 aaKnown RBP25.96■■□□□ 1.75
CDR2-201ENST00000268383 POLR3DP05423 398 aaPredicted RBP25.95■■□□□ 1.75
CDR2-201ENST00000268383 NAA16Q6N069 864 aaPredicted RBP25.95■■□□□ 1.75
CDR2-201ENST00000268383 ZNF330Q9Y3S2 320 aaPredicted RBP25.95■■□□□ 1.75
CDR2-201ENST00000268383 C1orf167Q5SNV9 1468 aa25.95■■□□□ 1.74
CDR2-201ENST00000268383 HELLSQ9NRZ9 838 aa25.95■■□□□ 1.74
CDR2-201ENST00000268383 BECN2A8MW95 431 aa25.94■■□□□ 1.74
CDR2-201ENST00000268383 KINO60870 393 aaKnown RBP25.94■■□□□ 1.74
CDR2-201ENST00000268383 DHX40Q8IX18 779 aaKnown RBP25.94■■□□□ 1.74
CDR2-201ENST00000268383 DSCC1Q9BVC3 393 aa25.94■■□□□ 1.74
CDR2-201ENST00000268383 HMGB1P09429 215 aaKnown RBP25.94■■□□□ 1.74
CDR2-201ENST00000268383 ADORA1P30542 326 aa25.94■■□□□ 1.74
CDR2-201ENST00000268383 STX1AQ16623 288 aa25.94■■□□□ 1.74
CDR2-201ENST00000268383 ARHGAP30Q7Z6I6 1101 aaPredicted RBP25.94■■□□□ 1.74
CDR2-201ENST00000268383 ENGASEQ8NFI3 743 aa25.94■■□□□ 1.74
CDR2-201ENST00000268383 LRRC8AQ8IWT6 810 aa25.94■■□□□ 1.74
CDR2-201ENST00000268383 AOPEPQ8N6M6 819 aa25.94■■□□□ 1.74
CDR2-201ENST00000268383 CWC25Q9NXE8 425 aaPredicted RBP25.94■■□□□ 1.74
CDR2-201ENST00000268383 PCDHA7Q9UN72 937 aa25.94■■□□□ 1.74
CDR2-201ENST00000268383 PALLDQ8WX93 1383 aa25.93■■□□□ 1.74
CDR2-201ENST00000268383 CTIFO43310 598 aaKnown RBP25.93■■□□□ 1.74
CDR2-201ENST00000268383 TRMT1Q9NXH9 659 aaKnown RBP25.93■■□□□ 1.74
CDR2-201ENST00000268383 SALL1Q9NSC2 1324 aa25.93■■□□□ 1.74
CDR2-201ENST00000268383 RFX7Q2KHR2 1363 aa25.93■■□□□ 1.74
CDR2-201ENST00000268383 CARMIL3Q8ND23 1372 aa25.93■■□□□ 1.74
CDR2-201ENST00000268383 RNF113AO15541 343 aaKnown RBP25.93■■□□□ 1.74
CDR2-201ENST00000268383 NCBP1Q09161 790 aaKnown RBP25.93■■□□□ 1.74
CDR2-201ENST00000268383 PI16Q6UXB8 463 aa25.93■■□□□ 1.74
CDR2-201ENST00000268383 MYH15Q9Y2K3 1946 aa25.92■■□□□ 1.74
CDR2-201ENST00000268383 CLIC4Q9Y696 253 aa25.92■■□□□ 1.74
CDR2-201ENST00000268383 WASHC4Q2M389 1173 aa25.92■■□□□ 1.74
CDR2-201ENST00000268383 ANKRD7Q92527 254 aa25.92■■□□□ 1.74
CDR2-201ENST00000268383 AGXT2Q9BYV1 514 aa25.92■■□□□ 1.74
CDR2-201ENST00000268383 FAM160A1Q05DH4 1040 aa25.91■■□□□ 1.74
CDR2-201ENST00000268383 SMAP1Q8IYB5 467 aaPredicted RBP25.91■■□□□ 1.74
CDR2-201ENST00000268383 EYA2O00167 538 aa25.91■■□□□ 1.74
CDR2-201ENST00000268383 FOXP2O15409 715 aa25.91■■□□□ 1.74
CDR2-201ENST00000268383 SCARF1Q14162 830 aa25.91■■□□□ 1.74
CDR2-201ENST00000268383 IL15P40933 162 aaPredicted RBP25.9■■□□□ 1.74
CDR2-201ENST00000268383 NDUFA8P51970 172 aa25.9■■□□□ 1.74
CDR2-201ENST00000268383 ZNF396Q96N95 335 aaPredicted RBP25.9■■□□□ 1.74
CDR2-201ENST00000268383 ZHX1Q9UKY1 873 aaPredicted RBP25.9■■□□□ 1.74
CDR2-201ENST00000268383 DENND2AQ9ULE3 1009 aa25.9■■□□□ 1.74
CDR2-201ENST00000268383 BIN1O00499 593 aa25.89■■□□□ 1.74
CDR2-201ENST00000268383 SDF4Q9BRK5 362 aa25.89■■□□□ 1.74
CDR2-201ENST00000268383 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.89■■□□□ 1.741e-8■□□□□ 10.6
CDR2-201ENST00000268383 NOL12Q9UGY1 213 aaKnown RBP eCLIP25.89■■□□□ 1.73
CDR2-201ENST00000268383 V9GYY5 206 aaPredicted RBP25.89■■□□□ 1.73
CDR2-201ENST00000268383 SKILP12757 684 aa25.88■■□□□ 1.73
CDR2-201ENST00000268383 ZSCAN20P17040 1043 aaPredicted RBP25.88■■□□□ 1.73
CDR2-201ENST00000268383 ISM2Q6H9L7 571 aa25.88■■□□□ 1.73
CDR2-201ENST00000268383 SYTL4Q96C24 671 aaPredicted RBP25.88■■□□□ 1.73
CDR2-201ENST00000268383 C19orf44Q9H6X5 657 aa25.88■■□□□ 1.73
CDR2-201ENST00000268383 CCDC69A6NI79 296 aa25.87■■□□□ 1.73
CDR2-201ENST00000268383 IGSF3O75054 1194 aa25.87■■□□□ 1.73
CDR2-201ENST00000268383 NKX2-3Q8TAU0 364 aa25.87■■□□□ 1.73
CDR2-201ENST00000268383 SMTNL1A8MU46 457 aa25.87■■□□□ 1.73
CDR2-201ENST00000268383 CTAGE5O15320 804 aa25.87■■□□□ 1.73
CDR2-201ENST00000268383 DPCR1Q3MIW9 517 aa25.87■■□□□ 1.73
CDR2-201ENST00000268383 GORABQ5T7V8 394 aa25.87■■□□□ 1.73
CDR2-201ENST00000268383 SARM1Q6SZW1 724 aa25.87■■□□□ 1.73
CDR2-201ENST00000268383 FMR1NBQ8N0W7 255 aaPredicted RBP25.87■■□□□ 1.73
CDR2-201ENST00000268383 ZNF274Q96GC6 653 aaPredicted RBP25.87■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms