RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 CHMP4BQ9H444 224 aaKnown RBP20.83■□□□□ 0.93
SDCBP-201ENST00000260130 POTECB2RU33 542 aa20.83■□□□□ 0.92
SDCBP-201ENST00000260130 CIAO1O76071 339 aa20.83■□□□□ 0.92
SDCBP-201ENST00000260130 KLRK1P26718 216 aa20.83■□□□□ 0.92
SDCBP-201ENST00000260130 ATP8B2P98198 1209 aa20.83■□□□□ 0.92
SDCBP-201ENST00000260130 UBE4AQ14139 1066 aa20.83■□□□□ 0.92
SDCBP-201ENST00000260130 ATG9AQ7Z3C6 839 aa20.83■□□□□ 0.92
SDCBP-201ENST00000260130 PODNQ7Z5L7 613 aa20.83■□□□□ 0.92
SDCBP-201ENST00000260130 PDE8BO95263 885 aa20.82■□□□□ 0.92
SDCBP-201ENST00000260130 C15orf52Q6ZUT6 534 aaKnown RBP20.82■□□□□ 0.92
SDCBP-201ENST00000260130 KCNQ5Q9NR82 932 aa20.82■□□□□ 0.92
SDCBP-201ENST00000260130 VGLL2Q8N8G2 317 aa20.82■□□□□ 0.92
SDCBP-201ENST00000260130 COA1Q9GZY4 146 aa20.82■□□□□ 0.92
SDCBP-201ENST00000260130 ZBTB40Q9NUA8 1239 aa20.82■□□□□ 0.92
SDCBP-201ENST00000260130 IRS2Q9Y4H2 1338 aa20.81■□□□□ 0.92
SDCBP-201ENST00000260130 IL15P40933 162 aaPredicted RBP20.8■□□□□ 0.92
SDCBP-201ENST00000260130 WDR90Q96KV7 1748 aa20.8■□□□□ 0.92
SDCBP-201ENST00000260130 IQCA1LA6NCM1 817 aa20.8■□□□□ 0.92
SDCBP-201ENST00000260130 SSH3Q8TE77 659 aa20.8■□□□□ 0.92
SDCBP-201ENST00000260130 PSMD14O00487 310 aa20.79■□□□□ 0.92
SDCBP-201ENST00000260130 POLA2Q14181 598 aa20.79■□□□□ 0.92
SDCBP-201ENST00000260130 CEP126Q9P2H0 1117 aa20.79■□□□□ 0.92
SDCBP-201ENST00000260130 CEP85Q6P2H3 762 aa20.79■□□□□ 0.92
SDCBP-201ENST00000260130 B4GALNT3Q6L9W6 998 aa20.78■□□□□ 0.92
SDCBP-201ENST00000260130 C16orf71Q8IYS4 520 aaPredicted RBP20.78■□□□□ 0.92
SDCBP-201ENST00000260130 CD209Q9NNX6 404 aa20.78■□□□□ 0.92
SDCBP-201ENST00000260130 HACL1Q9UJ83 578 aa20.78■□□□□ 0.92
SDCBP-201ENST00000260130 A0A1B0GUL6 1792 aa20.78■□□□□ 0.92
SDCBP-201ENST00000260130 SCNN1DP51172 638 aa20.78■□□□□ 0.92
SDCBP-201ENST00000260130 PUM3Q15397 648 aaKnown RBP20.78■□□□□ 0.92
SDCBP-201ENST00000260130 ZNF804AQ7Z570 1209 aa20.78■□□□□ 0.92
SDCBP-201ENST00000260130 LMOD1P29536 600 aaPredicted RBP20.77■□□□□ 0.92
SDCBP-201ENST00000260130 USP17L3A6NCW0 530 aa20.76■□□□□ 0.91
SDCBP-201ENST00000260130 USP17L4A6NCW7 530 aa20.76■□□□□ 0.91
SDCBP-201ENST00000260130 VIL1P09327 827 aaKnown RBP20.76■□□□□ 0.91
SDCBP-201ENST00000260130 FGFR2P21802 821 aa20.76■□□□□ 0.91
SDCBP-201ENST00000260130 GMPSP49915 693 aaPredicted RBP20.76■□□□□ 0.91
SDCBP-201ENST00000260130 USP17L1Q7RTZ2 530 aa20.76■□□□□ 0.91
SDCBP-201ENST00000260130 TAF1DQ9H5J8 278 aaPredicted RBP20.76■□□□□ 0.91
SDCBP-201ENST00000260130 TOMM70O94826 608 aa20.76■□□□□ 0.91
SDCBP-201ENST00000260130 G3BP1Q13283 466 aaKnown RBP eCLIP20.76■□□□□ 0.91
SDCBP-201ENST00000260130 RPAP2Q8IXW5 612 aaPredicted RBP20.76■□□□□ 0.91
SDCBP-201ENST00000260130 FAM84BQ96KN1 310 aaPredicted RBP20.76■□□□□ 0.91
SDCBP-201ENST00000260130 ZBTB12Q9Y330 459 aaPredicted RBP20.76■□□□□ 0.91
SDCBP-201ENST00000260130 IFIT1P09914 478 aaKnown RBP20.75■□□□□ 0.91
SDCBP-201ENST00000260130 GYG1P46976 350 aa20.75■□□□□ 0.91
SDCBP-201ENST00000260130 LPIN2Q92539 896 aa20.75■□□□□ 0.91
SDCBP-201ENST00000260130 GPRC5DQ9NZD1 345 aa20.75■□□□□ 0.91
SDCBP-201ENST00000260130 IL1R1P14778 569 aa20.75■□□□□ 0.91
SDCBP-201ENST00000260130 HIBADHP31937 336 aaKnown RBP20.75■□□□□ 0.91
SDCBP-201ENST00000260130 EPS15P42566 896 aa20.75■□□□□ 0.91
SDCBP-201ENST00000260130 DPF2Q92785 391 aa20.75■□□□□ 0.91
SDCBP-201ENST00000260130 RPS12P25398 132 aaKnown RBP20.74■□□□□ 0.91
SDCBP-201ENST00000260130 EPHX2P34913 555 aa20.74■□□□□ 0.91
SDCBP-201ENST00000260130 CAVIN4Q5BKX8 364 aa20.74■□□□□ 0.91
SDCBP-201ENST00000260130 SURF6O75683 361 aaKnown RBP20.73■□□□□ 0.91
SDCBP-201ENST00000260130 SLC5A1P13866 664 aa20.73■□□□□ 0.91
SDCBP-201ENST00000260130 STRIP1Q5VSL9 837 aa20.73■□□□□ 0.91
SDCBP-201ENST00000260130 RSBN1LQ6PCB5 846 aaPredicted RBP20.73■□□□□ 0.91
SDCBP-201ENST00000260130 TFCP2Q12800 502 aa20.73■□□□□ 0.91
SDCBP-201ENST00000260130 ATP2B3Q16720 1220 aa20.73■□□□□ 0.91
SDCBP-201ENST00000260130 TTLL5Q6EMB2 1281 aa20.73■□□□□ 0.91
SDCBP-201ENST00000260130 FBXO33Q7Z6M2 555 aa20.73■□□□□ 0.91
SDCBP-201ENST00000260130 VPS37DQ86XT2 251 aa20.73■□□□□ 0.91
SDCBP-201ENST00000260130 CNOT7Q9UIV1 285 aaKnown RBP20.73■□□□□ 0.91
SDCBP-201ENST00000260130 NOP58Q9Y2X3 529 aaKnown RBP20.73■□□□□ 0.91
SDCBP-201ENST00000260130 SCN9AQ15858 1988 aa20.72■□□□□ 0.91
SDCBP-201ENST00000260130 ERICH6Q7L0X2 663 aa20.72■□□□□ 0.91
SDCBP-201ENST00000260130 FBXW7Q969H0 707 aa20.72■□□□□ 0.91
SDCBP-201ENST00000260130 SCN4AP35499 1836 aa20.72■□□□□ 0.91
SDCBP-201ENST00000260130 GTF2IP78347 998 aa20.72■□□□□ 0.91
SDCBP-201ENST00000260130 DACT2Q5SW24 774 aa20.72■□□□□ 0.91
SDCBP-201ENST00000260130 PNMA8AQ86V59 439 aaPredicted RBP20.72■□□□□ 0.91
SDCBP-201ENST00000260130 AGBL3Q8NEM8 1001 aa20.72■□□□□ 0.91
SDCBP-201ENST00000260130 OS9Q13438 667 aaPredicted RBP20.71■□□□□ 0.91
SDCBP-201ENST00000260130 TDRD7Q8NHU6 1098 aaKnown RBP20.71■□□□□ 0.91
SDCBP-201ENST00000260130 RBM46Q8TBY0 533 aaKnown RBP20.71■□□□□ 0.91
SDCBP-201ENST00000260130 AKAP2Q9Y2D5 859 aa20.71■□□□□ 0.91
SDCBP-201ENST00000260130 HMMRO75330 724 aa20.7■□□□□ 0.91
SDCBP-201ENST00000260130 SASH1O94885 1247 aa20.7■□□□□ 0.91
SDCBP-201ENST00000260130 BCAMP50895 628 aa20.7■□□□□ 0.91
SDCBP-201ENST00000260130 SIRT2Q8IXJ6 389 aa20.7■□□□□ 0.91
SDCBP-201ENST00000260130 ADARB2Q9NS39 739 aaKnown RBP20.7■□□□□ 0.91
SDCBP-201ENST00000260130 H7C1D1 291 aa20.7■□□□□ 0.9
SDCBP-201ENST00000260130 EAPPQ56P03 285 aaPredicted RBP20.7■□□□□ 0.9
SDCBP-201ENST00000260130 MICALL2Q8IY33 904 aa20.7■□□□□ 0.9
SDCBP-201ENST00000260130 C1QTNF8P60827 252 aa20.69■□□□□ 0.9
SDCBP-201ENST00000260130 TIMM10P62072 90 aa20.69■□□□□ 0.9
SDCBP-201ENST00000260130 GMLQ99445 158 aa20.69■□□□□ 0.9
SDCBP-201ENST00000260130 MXD3Q9BW11 206 aa20.69■□□□□ 0.9
SDCBP-201ENST00000260130 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.69■□□□□ 0.9
SDCBP-201ENST00000260130 POTEIP0CG38 1075 aa20.69■□□□□ 0.9
SDCBP-201ENST00000260130 POTEJP0CG39 1038 aa20.69■□□□□ 0.9
SDCBP-201ENST00000260130 USP50Q70EL3 339 aaPredicted RBP20.69■□□□□ 0.9
SDCBP-201ENST00000260130 CRBNQ96SW2 442 aa20.69■□□□□ 0.9
SDCBP-201ENST00000260130 ZNF609O15014 1411 aa20.69■□□□□ 0.9
SDCBP-201ENST00000260130 MYO3BQ8WXR4 1341 aa20.69■□□□□ 0.9
SDCBP-201ENST00000260130 SHTN1A0MZ66 631 aa20.68■□□□□ 0.9
SDCBP-201ENST00000260130 A0A1B0GUL7 405 aa20.68■□□□□ 0.9
SDCBP-201ENST00000260130 LDHDQ86WU2 507 aa20.68■□□□□ 0.9
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