RNA–Protein interactions for RNA: ENST00000259605.10

RNF38-201, Transcript of ring finger protein 38, humanhuman

TSL 1 (best) BASIC

Gene RNF38, Length 5,012 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-201ENST00000259605 TEKT1Q969V4 418 aa4.61□□□□□ -1.67
RNF38-201ENST00000259605 EXOC7Q9UPT5 735 aa4.61□□□□□ -1.67
RNF38-201ENST00000259605 TRPM2O94759 1503 aa4.61□□□□□ -1.67
RNF38-201ENST00000259605 WDR62O43379 1518 aa4.61□□□□□ -1.67
RNF38-201ENST00000259605 ESYT2A0FGR8 921 aa4.61□□□□□ -1.67
RNF38-201ENST00000259605 PATL2C9JE40 543 aaKnown RBP4.61□□□□□ -1.67
RNF38-201ENST00000259605 PFDN6O15212 129 aa4.61□□□□□ -1.67
RNF38-201ENST00000259605 GTF2F1P35269 517 aaKnown RBP eCLIP4.61□□□□□ -1.67
RNF38-201ENST00000259605 CCT6AP40227 531 aaKnown RBP4.61□□□□□ -1.67
RNF38-201ENST00000259605 YARSP54577 528 aaKnown RBP4.61□□□□□ -1.67
RNF38-201ENST00000259605 RNASELQ05823 741 aaKnown RBP4.61□□□□□ -1.67
RNF38-201ENST00000259605 EIF2B5Q13144 721 aaKnown RBP4.61□□□□□ -1.67
RNF38-201ENST00000259605 RAB3GAP1Q15042 981 aa4.61□□□□□ -1.67
RNF38-201ENST00000259605 ATP2B3Q16720 1220 aa4.61□□□□□ -1.67
RNF38-201ENST00000259605 CACNA2D4Q7Z3S7 1137 aa4.61□□□□□ -1.67
RNF38-201ENST00000259605 UNC5CLQ8IV45 518 aa4.61□□□□□ -1.67
RNF38-201ENST00000259605 FAM114A1Q8IWE2 563 aa4.61□□□□□ -1.67
RNF38-201ENST00000259605 SLC16A10Q8TF71 515 aa4.61□□□□□ -1.67
RNF38-201ENST00000259605 RRP36Q96EU6 259 aaKnown RBP4.61□□□□□ -1.67
RNF38-201ENST00000259605 GOLGA6L10A0A0M3HER8 536 aa4.6□□□□□ -1.67
RNF38-201ENST00000259605 COPB2P35606 906 aa4.6□□□□□ -1.67
RNF38-201ENST00000259605 RRP1P56182 461 aaKnown RBP4.6□□□□□ -1.67
RNF38-201ENST00000259605 SSRP1Q08945 709 aaKnown RBP4.6□□□□□ -1.67
RNF38-201ENST00000259605 MSL1Q68DK7 614 aa4.6□□□□□ -1.67
RNF38-201ENST00000259605 TRMT1LQ7Z2T5 733 aaKnown RBP4.6□□□□□ -1.67
RNF38-201ENST00000259605 WAPLQ7Z5K2 1190 aa4.6□□□□□ -1.67
RNF38-201ENST00000259605 MNS1Q8NEH6 495 aa4.6□□□□□ -1.67
RNF38-201ENST00000259605 NCAPGQ9BPX3 1015 aa4.6□□□□□ -1.67
RNF38-201ENST00000259605 CCDC94Q9BW85 323 aaPredicted RBP4.6□□□□□ -1.67
RNF38-201ENST00000259605 SPATA31A6Q5VVP1 1343 aa4.6□□□□□ -1.67
RNF38-201ENST00000259605 GSTTP1A0A1W2PQM5 241 aa4.6□□□□□ -1.67
RNF38-201ENST00000259605 GOLGA8CPA6NN73 597 aa4.6□□□□□ -1.67
RNF38-201ENST00000259605 MAP4K4O95819 1239 aaPredicted RBP4.6□□□□□ -1.67
RNF38-201ENST00000259605 GNA11P29992 359 aa4.6□□□□□ -1.67
RNF38-201ENST00000259605 UBA7P41226 1012 aa4.6□□□□□ -1.67
RNF38-201ENST00000259605 RARSP54136 660 aaKnown RBP4.6□□□□□ -1.67
RNF38-201ENST00000259605 BRPF1P55201 1214 aaPredicted RBP4.6□□□□□ -1.67
RNF38-201ENST00000259605 CUL4BQ13620 913 aa4.6□□□□□ -1.67
RNF38-201ENST00000259605 PLCB4Q15147 1175 aa4.6□□□□□ -1.67
RNF38-201ENST00000259605 RPAP2Q8IXW5 612 aaPredicted RBP4.6□□□□□ -1.67
RNF38-201ENST00000259605 GLG1Q92896 1179 aa4.6□□□□□ -1.67
RNF38-201ENST00000259605 ZFYVE28Q9HCC9 887 aa4.6□□□□□ -1.67
RNF38-201ENST00000259605 STIM2Q9P246 746 aa4.6□□□□□ -1.67
RNF38-201ENST00000259605 CFAP45Q9UL16 551 aa4.6□□□□□ -1.67
RNF38-201ENST00000259605 FANCIQ9NVI1 1328 aa4.6□□□□□ -1.67
RNF38-201ENST00000259605 SMTNL1A8MU46 457 aa4.6□□□□□ -1.67
RNF38-201ENST00000259605 ALDH1A1P00352 501 aa4.6□□□□□ -1.67
RNF38-201ENST00000259605 HIBADHP31937 336 aaKnown RBP4.6□□□□□ -1.67
RNF38-201ENST00000259605 RBM25P49756 843 aaKnown RBP4.6□□□□□ -1.67
RNF38-201ENST00000259605 YWHAEP62258 255 aaKnown RBP4.6□□□□□ -1.67
RNF38-201ENST00000259605 INF2Q27J81 1249 aa4.6□□□□□ -1.67
RNF38-201ENST00000259605 ANKRD35Q8N283 1001 aa4.6□□□□□ -1.67
RNF38-201ENST00000259605 RNF169Q8NCN4 708 aa4.6□□□□□ -1.67
RNF38-201ENST00000259605 PRDM5Q9NQX1 630 aaPredicted RBP4.6□□□□□ -1.67
RNF38-201ENST00000259605 IQSEC3Q9UPP2 1182 aaPredicted RBP4.6□□□□□ -1.67
RNF38-201ENST00000259605 THRAP3Q9Y2W1 955 aaKnown RBP4.6□□□□□ -1.67
RNF38-201ENST00000259605 ASXL2Q76L83 1435 aa4.6□□□□□ -1.67
RNF38-201ENST00000259605 CAMSAP2Q08AD1 1489 aa4.6□□□□□ -1.67
RNF38-201ENST00000259605 SHTN1A0MZ66 631 aa4.6□□□□□ -1.67
RNF38-201ENST00000259605 GOLGA8AA7E2F4 631 aa4.6□□□□□ -1.67
RNF38-201ENST00000259605 GOLGA8BA8MQT2 603 aa4.6□□□□□ -1.67
RNF38-201ENST00000259605 H0YCG3 227 aa4.6□□□□□ -1.67
RNF38-201ENST00000259605 IRS4O14654 1257 aaPredicted RBP4.6□□□□□ -1.67
RNF38-201ENST00000259605 IDEP14735 1019 aa4.6□□□□□ -1.67
RNF38-201ENST00000259605 PDE4DQ08499 809 aa4.6□□□□□ -1.67
RNF38-201ENST00000259605 GPATCH4Q5T3I0 446 aaKnown RBP4.6□□□□□ -1.67
RNF38-201ENST00000259605 TCERG1LQ5VWI1 586 aa4.6□□□□□ -1.67
RNF38-201ENST00000259605 NSMFQ6X4W1 530 aa4.6□□□□□ -1.67
RNF38-201ENST00000259605 METTL23Q86XA0 190 aa4.6□□□□□ -1.67
RNF38-201ENST00000259605 BBS5Q8N3I7 341 aa4.6□□□□□ -1.67
RNF38-201ENST00000259605 FAM212AQ96EL1 285 aa4.6□□□□□ -1.67
RNF38-201ENST00000259605 IRAK4Q9NWZ3 460 aa4.6□□□□□ -1.67
RNF38-201ENST00000259605 TNNQ9UQP3 1299 aa4.6□□□□□ -1.67
RNF38-201ENST00000259605 AFF2P51816 1311 aa4.6□□□□□ -1.67
RNF38-201ENST00000259605 DHX29Q7Z478 1369 aaKnown RBP4.59□□□□□ -1.67
RNF38-201ENST00000259605 JCADQ9P266 1359 aa4.59□□□□□ -1.67
RNF38-201ENST00000259605 TOPBP1Q92547 1522 aa4.59□□□□□ -1.67
RNF38-201ENST00000259605 ATP8B3O60423 1300 aa4.59□□□□□ -1.67
RNF38-201ENST00000259605 USP8P40818 1118 aa4.59□□□□□ -1.67
RNF38-201ENST00000259605 DUSP27Q5VZP5 1158 aa4.59□□□□□ -1.67
RNF38-201ENST00000259605 NCAPG2Q86XI2 1143 aa4.59□□□□□ -1.67
RNF38-201ENST00000259605 ZBTB8OSQ8IWT0 167 aa4.59□□□□□ -1.67
RNF38-201ENST00000259605 CARD10Q9BWT7 1032 aa4.59□□□□□ -1.67
RNF38-201ENST00000259605 MAGEB6P1A0A0J9YX57 407 aa4.59□□□□□ -1.67
RNF38-201ENST00000259605 STX10O60499 249 aa4.59□□□□□ -1.67
RNF38-201ENST00000259605 SEC24BO95487 1268 aa4.59□□□□□ -1.67
RNF38-201ENST00000259605 IL15P40933 162 aaPredicted RBP4.59□□□□□ -1.67
RNF38-201ENST00000259605 PRPHP41219 470 aa4.59□□□□□ -1.67
RNF38-201ENST00000259605 ATXN3P54252 364 aaPredicted RBP4.59□□□□□ -1.67
RNF38-201ENST00000259605 TRPC3Q13507 836 aa4.59□□□□□ -1.67
RNF38-201ENST00000259605 CCDC40Q4G0X9 1142 aa4.59□□□□□ -1.67
RNF38-201ENST00000259605 KANK4Q5T7N3 995 aaPredicted RBP4.59□□□□□ -1.67
RNF38-201ENST00000259605 TTC22Q5TAA0 569 aa4.59□□□□□ -1.67
RNF38-201ENST00000259605 FOXD4L5Q5VV16 416 aaPredicted RBP4.59□□□□□ -1.67
RNF38-201ENST00000259605 FAM160B1Q5W0V3 765 aa4.59□□□□□ -1.67
RNF38-201ENST00000259605 CEP112Q8N8E3 955 aa4.59□□□□□ -1.67
RNF38-201ENST00000259605 TRIML1Q8N9V2 468 aa4.59□□□□□ -1.67
RNF38-201ENST00000259605 FOXD4L4Q8WXT5 416 aaPredicted RBP4.59□□□□□ -1.67
RNF38-201ENST00000259605 CCDC114Q96M63 670 aa4.59□□□□□ -1.67
RNF38-201ENST00000259605 FNBP1Q96RU3 617 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms