RNA–Protein interactions for RNA: ENST00000254998.2

NXT1-201, Transcript of nuclear transport factor 2 like export factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NXT1, Length 1,123 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXT1-201ENST00000254998 ATG9AQ7Z3C6 839 aa26.9■■□□□ 1.9
NXT1-201ENST00000254998 RBM46Q8TBY0 533 aaKnown RBP26.9■■□□□ 1.9
NXT1-201ENST00000254998 TAF1DQ9H5J8 278 aaPredicted RBP26.9■■□□□ 1.9
NXT1-201ENST00000254998 PSME4Q14997 1843 aa26.89■■□□□ 1.9
NXT1-201ENST00000254998 PSMD14O00487 310 aa26.89■■□□□ 1.9
NXT1-201ENST00000254998 KCNQ5Q9NR82 932 aa26.89■■□□□ 1.9
NXT1-201ENST00000254998 DDX19BQ9UMR2 479 aa26.89■■□□□ 1.9
NXT1-201ENST00000254998 PDE8BO95263 885 aa26.88■■□□□ 1.89
NXT1-201ENST00000254998 VIL1P09327 827 aaKnown RBP26.88■■□□□ 1.89
NXT1-201ENST00000254998 C1QTNF8P60827 252 aa26.88■■□□□ 1.89
NXT1-201ENST00000254998 ZNF609O15014 1411 aa26.88■■□□□ 1.89
NXT1-201ENST00000254998 LMOD1P29536 600 aaPredicted RBP26.87■■□□□ 1.89
NXT1-201ENST00000254998 GMPSP49915 693 aaPredicted RBP26.87■■□□□ 1.89
NXT1-201ENST00000254998 GPRC5DQ9NZD1 345 aa26.87■■□□□ 1.89
NXT1-201ENST00000254998 RPS12P25398 132 aaKnown RBP26.86■■□□□ 1.89
NXT1-201ENST00000254998 EPHX2P34913 555 aa26.86■■□□□ 1.89
NXT1-201ENST00000254998 IL15P40933 162 aaPredicted RBP26.86■■□□□ 1.89
NXT1-201ENST00000254998 DPF2Q92785 391 aa26.86■■□□□ 1.89
NXT1-201ENST00000254998 PA2G4Q9UQ80 394 aaKnown RBP26.86■■□□□ 1.89
NXT1-201ENST00000254998 COG6Q9Y2V7 657 aa26.86■■□□□ 1.89
NXT1-201ENST00000254998 PNMA6EA0A0J9YXQ4 647 aa26.85■■□□□ 1.89
NXT1-201ENST00000254998 USP17L3A6NCW0 530 aa26.85■■□□□ 1.89
NXT1-201ENST00000254998 USP17L4A6NCW7 530 aa26.85■■□□□ 1.89
NXT1-201ENST00000254998 ATP8B2P98198 1209 aa26.85■■□□□ 1.89
NXT1-201ENST00000254998 USP17L1Q7RTZ2 530 aa26.85■■□□□ 1.89
NXT1-201ENST00000254998 ZNF804AQ7Z570 1209 aa26.85■■□□□ 1.89
NXT1-201ENST00000254998 SIL1Q9H173 461 aa26.85■■□□□ 1.89
NXT1-201ENST00000254998 CHMP4BQ9H444 224 aaKnown RBP26.85■■□□□ 1.89
NXT1-201ENST00000254998 EPS15P42566 896 aa26.84■■□□□ 1.89
NXT1-201ENST00000254998 POLA2Q14181 598 aa26.84■■□□□ 1.89
NXT1-201ENST00000254998 PUM3Q15397 648 aaKnown RBP26.84■■□□□ 1.89
NXT1-201ENST00000254998 C20orf194Q5TEA3 1177 aa26.84■■□□□ 1.89
NXT1-201ENST00000254998 SSH3Q8TE77 659 aa26.84■■□□□ 1.89
NXT1-201ENST00000254998 C1orf115Q9H7X2 142 aa26.84■■□□□ 1.89
NXT1-201ENST00000254998 CD209Q9NNX6 404 aa26.84■■□□□ 1.89
NXT1-201ENST00000254998 IL1R1P14778 569 aa26.83■■□□□ 1.89
NXT1-201ENST00000254998 FGFR2P21802 821 aa26.83■■□□□ 1.89
NXT1-201ENST00000254998 PNMA8AQ86V59 439 aaPredicted RBP26.83■■□□□ 1.89
NXT1-201ENST00000254998 CEP126Q9P2H0 1117 aa26.83■■□□□ 1.89
NXT1-201ENST00000254998 FSTL1Q12841 308 aa26.82■■□□□ 1.88
NXT1-201ENST00000254998 STRIP1Q5VSL9 837 aa26.82■■□□□ 1.88
NXT1-201ENST00000254998 RSBN1LQ6PCB5 846 aaPredicted RBP26.82■■□□□ 1.88
NXT1-201ENST00000254998 ZBTB40Q9NUA8 1239 aa26.82■■□□□ 1.88
NXT1-201ENST00000254998 SMC1BQ8NDV3 1235 aa26.81■■□□□ 1.88
NXT1-201ENST00000254998 AGBL3Q8NEM8 1001 aa26.81■■□□□ 1.88
NXT1-201ENST00000254998 FAM84BQ96KN1 310 aaPredicted RBP26.81■■□□□ 1.88
NXT1-201ENST00000254998 ADARB2Q9NS39 739 aaKnown RBP26.81■■□□□ 1.88
NXT1-201ENST00000254998 ZBTB12Q9Y330 459 aaPredicted RBP26.81■■□□□ 1.88
NXT1-201ENST00000254998 ZNF646O15015 1829 aaPredicted RBP26.81■■□□□ 1.88
NXT1-201ENST00000254998 ADAMTSL1Q8N6G6 1762 aa26.8■■□□□ 1.88
NXT1-201ENST00000254998 RRP1P56182 461 aaKnown RBP26.8■■□□□ 1.88
NXT1-201ENST00000254998 DACT2Q5SW24 774 aa26.8■■□□□ 1.88
NXT1-201ENST00000254998 CEP85Q6P2H3 762 aa26.8■■□□□ 1.88
NXT1-201ENST00000254998 USP50Q70EL3 339 aaPredicted RBP26.8■■□□□ 1.88
NXT1-201ENST00000254998 LDHDQ86WU2 507 aa26.8■■□□□ 1.88
NXT1-201ENST00000254998 GMLQ99445 158 aa26.8■■□□□ 1.88
NXT1-201ENST00000254998 CNOT7Q9UIV1 285 aaKnown RBP26.8■■□□□ 1.88
NXT1-201ENST00000254998 IFIT1P09914 478 aaKnown RBP26.79■■□□□ 1.88
NXT1-201ENST00000254998 HIBADHP31937 336 aaKnown RBP26.79■■□□□ 1.88
NXT1-201ENST00000254998 FBXO33Q7Z6M2 555 aa26.79■■□□□ 1.88
NXT1-201ENST00000254998 LPIN2Q92539 896 aa26.79■■□□□ 1.88
NXT1-201ENST00000254998 POTEIP0CG38 1075 aa26.78■■□□□ 1.88
NXT1-201ENST00000254998 POTEJP0CG39 1038 aa26.78■■□□□ 1.88
NXT1-201ENST00000254998 GYG1P46976 350 aa26.78■■□□□ 1.88
NXT1-201ENST00000254998 MICALL2Q8IY33 904 aa26.78■■□□□ 1.88
NXT1-201ENST00000254998 TDRD7Q8NHU6 1098 aaKnown RBP26.78■■□□□ 1.88
NXT1-201ENST00000254998 MYO3BQ8WXR4 1341 aa26.77■■□□□ 1.88
NXT1-201ENST00000254998 H7C1D1 291 aa26.77■■□□□ 1.88
NXT1-201ENST00000254998 SLC5A1P13866 664 aa26.77■■□□□ 1.88
NXT1-201ENST00000254998 ATP2B3Q16720 1220 aa26.77■■□□□ 1.88
NXT1-201ENST00000254998 EAPPQ56P03 285 aaPredicted RBP26.77■■□□□ 1.88
NXT1-201ENST00000254998 TTLL5Q6EMB2 1281 aa26.77■■□□□ 1.88
NXT1-201ENST00000254998 CHADLQ6NUI6 762 aa26.77■■□□□ 1.88
NXT1-201ENST00000254998 GTF2IP78347 998 aa26.76■■□□□ 1.87
NXT1-201ENST00000254998 CAVIN4Q5BKX8 364 aa26.76■■□□□ 1.87
NXT1-201ENST00000254998 NOP58Q9Y2X3 529 aaKnown RBP26.76■■□□□ 1.87
NXT1-201ENST00000254998 FAM205AQ6ZU69 1335 aa26.75■■□□□ 1.87
NXT1-201ENST00000254998 SASH1O94885 1247 aa26.75■■□□□ 1.87
NXT1-201ENST00000254998 ZNF280AP59817 542 aaPredicted RBP26.75■■□□□ 1.87
NXT1-201ENST00000254998 G3BP1Q13283 466 aaKnown RBP eCLIP26.75■■□□□ 1.87
NXT1-201ENST00000254998 RPAP2Q8IXW5 612 aaPredicted RBP26.75■■□□□ 1.87
NXT1-201ENST00000254998 SHTN1A0MZ66 631 aa26.74■■□□□ 1.87
NXT1-201ENST00000254998 MMP14P50281 582 aa26.74■■□□□ 1.87
NXT1-201ENST00000254998 FKBP1AP62942 108 aaKnown RBP26.74■■□□□ 1.87
NXT1-201ENST00000254998 TFCP2Q12800 502 aa26.73■■□□□ 1.87
NXT1-201ENST00000254998 VPS37DQ86XT2 251 aa26.73■■□□□ 1.87
NXT1-201ENST00000254998 FBXW7Q969H0 707 aa26.73■■□□□ 1.87
NXT1-201ENST00000254998 AKAP2Q9Y2D5 859 aa26.73■■□□□ 1.87
NXT1-201ENST00000254998 USP17L8P0C7I0 530 aa26.72■■□□□ 1.87
NXT1-201ENST00000254998 TRPM4Q8TD43 1214 aa26.72■■□□□ 1.87
NXT1-201ENST00000254998 ZBTB22O15209 634 aa26.71■■□□□ 1.87
NXT1-201ENST00000254998 BCAMP50895 628 aa26.71■■□□□ 1.87
NXT1-201ENST00000254998 ZC3H15Q8WU90 426 aaKnown RBP26.71■■□□□ 1.87
NXT1-201ENST00000254998 MXD3Q9BW11 206 aa26.71■■□□□ 1.87
NXT1-201ENST00000254998 PGAP2Q9UHJ9 254 aa26.71■■□□□ 1.87
NXT1-201ENST00000254998 CLEC11AQ9Y240 323 aa26.71■■□□□ 1.87
NXT1-201ENST00000254998 ARAP2Q8WZ64 1704 aa26.7■■□□□ 1.87
NXT1-201ENST00000254998 SURF6O75683 361 aaKnown RBP26.7■■□□□ 1.86
NXT1-201ENST00000254998 HIRAP54198 1017 aaPredicted RBP26.7■■□□□ 1.86
NXT1-201ENST00000254998 HMMRO75330 724 aa26.69■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms