RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 KDM2BQ8NHM5 1336 aa17.4■□□□□ 0.38
VPS25-201ENST00000253794 A0A1B0GUL7 405 aa17.39■□□□□ 0.37
VPS25-201ENST00000253794 DCAF8L1A6NGE4 600 aa17.39■□□□□ 0.37
VPS25-201ENST00000253794 IFIT1P09914 478 aaKnown RBP17.39■□□□□ 0.37
VPS25-201ENST00000253794 SLC5A1P13866 664 aa17.39■□□□□ 0.37
VPS25-201ENST00000253794 ZC3H12CQ9C0D7 883 aaKnown RBP17.39■□□□□ 0.37
VPS25-201ENST00000253794 ZNF277Q9NRM2 450 aaPredicted RBP17.39■□□□□ 0.37
VPS25-201ENST00000253794 SBF1O95248 1867 aa17.38■□□□□ 0.37
VPS25-201ENST00000253794 KLRK1P26718 216 aa17.38■□□□□ 0.37
VPS25-201ENST00000253794 FBXO33Q7Z6M2 555 aa17.38■□□□□ 0.37
VPS25-201ENST00000253794 TXNRD3Q86VQ6 643 aa17.38■□□□□ 0.37
VPS25-201ENST00000253794 CLASRPQ8N2M8 674 aaKnown RBP17.38■□□□□ 0.37
VPS25-201ENST00000253794 EAF2Q96CJ1 260 aaPredicted RBP17.38■□□□□ 0.37
VPS25-201ENST00000253794 PPP4R2Q9NY27 417 aa17.38■□□□□ 0.37
VPS25-201ENST00000253794 COL4A5P29400 1685 aa17.38■□□□□ 0.37
VPS25-201ENST00000253794 PPIP5K2O43314 1243 aa17.37■□□□□ 0.37
VPS25-201ENST00000253794 AOC3Q16853 763 aa17.37■□□□□ 0.37
VPS25-201ENST00000253794 FAM84BQ96KN1 310 aaPredicted RBP17.37■□□□□ 0.37
VPS25-201ENST00000253794 ZC3H4Q9UPT8 1303 aaKnown RBP17.37■□□□□ 0.37
VPS25-201ENST00000253794 TIMM10P62072 90 aa17.36■□□□□ 0.37
VPS25-201ENST00000253794 NUCB1Q02818 461 aa17.36■□□□□ 0.37
VPS25-201ENST00000253794 CENPQQ7L2Z9 268 aaPredicted RBP17.36■□□□□ 0.37
VPS25-201ENST00000253794 GPR101Q96P66 508 aaPredicted RBP17.36■□□□□ 0.37
VPS25-201ENST00000253794 COA1Q9GZY4 146 aa17.36■□□□□ 0.37
VPS25-201ENST00000253794 DICER1Q9UPY3 1922 aaKnown RBP17.36■□□□□ 0.37
VPS25-201ENST00000253794 IL1R1P14778 569 aa17.35■□□□□ 0.37
VPS25-201ENST00000253794 ZNF804AQ7Z570 1209 aa17.35■□□□□ 0.37
VPS25-201ENST00000253794 PODNQ7Z5L7 613 aa17.35■□□□□ 0.37
VPS25-201ENST00000253794 LARGE2Q8N3Y3 721 aa17.35■□□□□ 0.37
VPS25-201ENST00000253794 XAGE2Q96GT9 111 aa17.35■□□□□ 0.37
VPS25-201ENST00000253794 ZNF512BQ96KM6 892 aaPredicted RBP17.35■□□□□ 0.37
VPS25-201ENST00000253794 IL1RAPL2Q9NP60 686 aa17.35■□□□□ 0.37
VPS25-201ENST00000253794 DBNLQ9UJU6 430 aaKnown RBP17.35■□□□□ 0.37
VPS25-201ENST00000253794 APBB1O00213 710 aa17.34■□□□□ 0.37
VPS25-201ENST00000253794 ADORA1P30542 326 aa17.34■□□□□ 0.37
VPS25-201ENST00000253794 HIBADHP31937 336 aaKnown RBP17.34■□□□□ 0.37
VPS25-201ENST00000253794 CAVIN4Q5BKX8 364 aa17.34■□□□□ 0.37
VPS25-201ENST00000253794 TDRD7Q8NHU6 1098 aaKnown RBP17.34■□□□□ 0.37
VPS25-201ENST00000253794 CCDC136Q96JN2 1154 aa17.34■□□□□ 0.37
VPS25-201ENST00000253794 CD209Q9NNX6 404 aa17.34■□□□□ 0.37
VPS25-201ENST00000253794 PDS5AQ29RF7 1337 aaKnown RBP17.33■□□□□ 0.36
VPS25-201ENST00000253794 SALL3Q9BXA9 1300 aa17.33■□□□□ 0.36
VPS25-201ENST00000253794 FZD9O00144 591 aa17.33■□□□□ 0.36
VPS25-201ENST00000253794 RIMBP2O15034 1052 aa17.33■□□□□ 0.36
VPS25-201ENST00000253794 GYG1P46976 350 aa17.33■□□□□ 0.36
VPS25-201ENST00000253794 ANKRD45Q5TZF3 282 aa17.33■□□□□ 0.36
VPS25-201ENST00000253794 C9orf131Q5VYM1 1079 aa17.33■□□□□ 0.36
VPS25-201ENST00000253794 AACSQ86V21 672 aa17.33■□□□□ 0.36
VPS25-201ENST00000253794 NIM1KQ8IY84 436 aa17.33■□□□□ 0.36
VPS25-201ENST00000253794 JDP2Q8WYK2 163 aa17.33■□□□□ 0.36
VPS25-201ENST00000253794 NEUROD6Q96NK8 337 aa17.33■□□□□ 0.36
VPS25-201ENST00000253794 DBNDD2Q9BQY9 259 aa17.33■□□□□ 0.36
VPS25-201ENST00000253794 ZNRF3Q9ULT6 936 aa17.33■□□□□ 0.36
VPS25-201ENST00000253794 SEMA3EO15041 775 aa17.32■□□□□ 0.36
VPS25-201ENST00000253794 SMARCA5O60264 1052 aaPredicted RBP17.32■□□□□ 0.36
VPS25-201ENST00000253794 ECE2O60344 883 aa17.32■□□□□ 0.36
VPS25-201ENST00000253794 ARID4AP29374 1257 aaPredicted RBP17.32■□□□□ 0.36
VPS25-201ENST00000253794 BCAMP50895 628 aa17.32■□□□□ 0.36
VPS25-201ENST00000253794 CCDC102BQ68D86 513 aa17.32■□□□□ 0.36
VPS25-201ENST00000253794 CHD1LQ86WJ1 897 aa17.32■□□□□ 0.36
VPS25-201ENST00000253794 TLR7Q9NYK1 1049 aaKnown RBP17.32■□□□□ 0.36
VPS25-201ENST00000253794 RNF181Q9P0P0 153 aa17.32■□□□□ 0.36
VPS25-201ENST00000253794 TIAM2Q8IVF5 1701 aa17.32■□□□□ 0.36
VPS25-201ENST00000253794 YDJCA8MPS7 323 aa17.31■□□□□ 0.36
VPS25-201ENST00000253794 IFIT2P09913 472 aaKnown RBP17.31■□□□□ 0.36
VPS25-201ENST00000253794 PHKA1P46020 1223 aa17.31■□□□□ 0.36
VPS25-201ENST00000253794 CCDC8Q9H0W5 538 aaPredicted RBP17.31■□□□□ 0.36
VPS25-201ENST00000253794 DBNDD1Q9H9R9 158 aa17.31■□□□□ 0.36
VPS25-201ENST00000253794 CCDC88AQ3V6T2 1871 aa17.31■□□□□ 0.36
VPS25-201ENST00000253794 FAM205AQ6ZU69 1335 aa17.3■□□□□ 0.36
VPS25-201ENST00000253794 UQCRFS1P1P0C7P4 283 aa17.3■□□□□ 0.36
VPS25-201ENST00000253794 DOK7Q18PE1 504 aa17.3■□□□□ 0.36
VPS25-201ENST00000253794 CCDC158Q5M9N0 1113 aa17.3■□□□□ 0.36
VPS25-201ENST00000253794 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.3■□□□□ 0.36
VPS25-201ENST00000253794 GNL3LQ9NVN8 582 aaKnown RBP17.3■□□□□ 0.36
VPS25-201ENST00000253794 ZNF646O15015 1829 aaPredicted RBP17.3■□□□□ 0.36
VPS25-201ENST00000253794 PSME4Q14997 1843 aa17.3■□□□□ 0.36
VPS25-201ENST00000253794 GORABQ5T7V8 394 aa17.29■□□□□ 0.36
VPS25-201ENST00000253794 VPS37DQ86XT2 251 aa17.29■□□□□ 0.36
VPS25-201ENST00000253794 ZBTB47Q9UFB7 747 aaPredicted RBP17.29■□□□□ 0.36
VPS25-201ENST00000253794 STAP2Q9UGK3 403 aa17.29■□□□□ 0.36
VPS25-201ENST00000253794 SCN9AQ15858 1988 aa17.29■□□□□ 0.36
VPS25-201ENST00000253794 COL1A1P02452 1464 aaPredicted RBP17.29■□□□□ 0.36
VPS25-201ENST00000253794 TTC41PQ6P2S7 1318 aa17.28■□□□□ 0.36
VPS25-201ENST00000253794 FKBP1AP62942 108 aaKnown RBP17.28■□□□□ 0.36
VPS25-201ENST00000253794 STRIP1Q5VSL9 837 aa17.28■□□□□ 0.36
VPS25-201ENST00000253794 B4GALNT3Q6L9W6 998 aa17.28■□□□□ 0.36
VPS25-201ENST00000253794 DENND2AQ9ULE3 1009 aa17.28■□□□□ 0.36
VPS25-201ENST00000253794 CHD4Q14839 1912 aa17.27■□□□□ 0.36
VPS25-201ENST00000253794 G3V3G9 751 aa17.27■□□□□ 0.36
VPS25-201ENST00000253794 ATP5JP18859 108 aa17.27■□□□□ 0.36
VPS25-201ENST00000253794 EIF6P56537 245 aaKnown RBP17.27■□□□□ 0.36
VPS25-201ENST00000253794 CXCL9Q07325 125 aa17.27■□□□□ 0.36
VPS25-201ENST00000253794 RASGRF1Q13972 1273 aa17.27■□□□□ 0.36
VPS25-201ENST00000253794 DCAF8Q5TAQ9 597 aa17.27■□□□□ 0.36
VPS25-201ENST00000253794 C16orf71Q8IYS4 520 aaPredicted RBP17.27■□□□□ 0.36
VPS25-201ENST00000253794 LNPKQ9C0E8 428 aa17.27■□□□□ 0.36
VPS25-201ENST00000253794 AOX1Q06278 1338 aa17.26■□□□□ 0.35
VPS25-201ENST00000253794 SALL1Q9NSC2 1324 aa17.26■□□□□ 0.35
VPS25-201ENST00000253794 USP17L3A6NCW0 530 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms