RNA–Protein interactions for RNA: ENST00000248121.6

SYNGR3-201, Transcript of synaptogyrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNGR3, Length 2,051 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-201ENST00000248121 WTIPA6NIX2 430 aaPredicted RBP28.09■■■□□ 2.09
SYNGR3-201ENST00000248121 MCM4P33991 863 aa28.09■■■□□ 2.09
SYNGR3-201ENST00000248121 SCARF1Q14162 830 aa28.09■■■□□ 2.09
SYNGR3-201ENST00000248121 MSL1Q68DK7 614 aa28.09■■■□□ 2.09
SYNGR3-201ENST00000248121 PRPF40BQ6NWY9 871 aaKnown RBP28.09■■■□□ 2.09
SYNGR3-201ENST00000248121 CDC5LQ99459 802 aaKnown RBP28.09■■■□□ 2.09
SYNGR3-201ENST00000248121 NRXN2Q9P2S2 1712 aa28.09■■■□□ 2.09
SYNGR3-201ENST00000248121 FGFR2P21802 821 aa28.08■■■□□ 2.09
SYNGR3-201ENST00000248121 CHRNDQ07001 517 aa28.08■■■□□ 2.09
SYNGR3-201ENST00000248121 ANKRD18AQ8IVF6 992 aa28.08■■■□□ 2.09
SYNGR3-201ENST00000248121 KBTBD3Q8NAB2 608 aa28.08■■■□□ 2.09
SYNGR3-201ENST00000248121 RBM8AQ9Y5S9 174 aaKnown RBP28.08■■■□□ 2.09
SYNGR3-201ENST00000248121 ILDR1Q86SU0 546 aaPredicted RBP28.07■■■□□ 2.08
SYNGR3-201ENST00000248121 TTC14Q96N46 770 aa28.07■■■□□ 2.08
SYNGR3-201ENST00000248121 PAG1Q9NWQ8 432 aa28.07■■■□□ 2.08
SYNGR3-201ENST00000248121 MYO5AQ9Y4I1 1855 aaKnown RBP28.07■■■□□ 2.08
SYNGR3-201ENST00000248121 DEKP35659 375 aaKnown RBP28.06■■■□□ 2.08
SYNGR3-201ENST00000248121 PI16Q6UXB8 463 aa28.06■■■□□ 2.08
SYNGR3-201ENST00000248121 GOLIM4O00461 696 aa28.06■■■□□ 2.08
SYNGR3-201ENST00000248121 QSER1Q2KHR3 1735 aa28.05■■■□□ 2.08
SYNGR3-201ENST00000248121 PUM3Q15397 648 aaKnown RBP28.05■■■□□ 2.08
SYNGR3-201ENST00000248121 ADCK5Q3MIX3 580 aa28.05■■■□□ 2.08
SYNGR3-201ENST00000248121 PPIL4Q8WUA2 492 aaKnown RBP eCLIP28.05■■■□□ 2.08
SYNGR3-201ENST00000248121 IFIT1P09914 478 aaKnown RBP28.04■■■□□ 2.08
SYNGR3-201ENST00000248121 CUL4AQ13619 759 aa28.04■■■□□ 2.08
SYNGR3-201ENST00000248121 SLC15A2Q16348 729 aa28.04■■■□□ 2.08
SYNGR3-201ENST00000248121 NOL8Q76FK4 1167 aaKnown RBP28.04■■■□□ 2.08
SYNGR3-201ENST00000248121 TTC39AQ5SRH9 613 aa28.04■■■□□ 2.08
SYNGR3-201ENST00000248121 GORABQ5T7V8 394 aa28.04■■■□□ 2.08
SYNGR3-201ENST00000248121 CREB3L3Q68CJ9 461 aa28.04■■■□□ 2.08
SYNGR3-201ENST00000248121 SEC62Q99442 399 aaKnown RBP28.04■■■□□ 2.08
SYNGR3-201ENST00000248121 BSDC1Q9NW68 430 aaPredicted RBP28.04■■■□□ 2.08
SYNGR3-201ENST00000248121 HMGB2P26583 209 aaKnown RBP28.03■■■□□ 2.08
SYNGR3-201ENST00000248121 IL27Q8NEV9 243 aa28.03■■■□□ 2.08
SYNGR3-201ENST00000248121 PHKA1P46020 1223 aa28.03■■■□□ 2.08
SYNGR3-201ENST00000248121 SLFNL1Q499Z3 407 aa28.03■■■□□ 2.08
SYNGR3-201ENST00000248121 PDGFDQ9GZP0 370 aaPredicted RBP28.03■■■□□ 2.08
SYNGR3-201ENST00000248121 CWC22Q9HCG8 908 aaKnown RBP28.03■■■□□ 2.08
SYNGR3-201ENST00000248121 MINPP1Q9UNW1 487 aa28.03■■■□□ 2.08
SYNGR3-201ENST00000248121 CPA1P15085 419 aa28.02■■■□□ 2.08
SYNGR3-201ENST00000248121 CCDC158Q5M9N0 1113 aa28.02■■■□□ 2.08
SYNGR3-201ENST00000248121 LPIN2Q92539 896 aa28.02■■■□□ 2.08
SYNGR3-201ENST00000248121 RPS8P62241 208 aaKnown RBP28.01■■■□□ 2.07
SYNGR3-201ENST00000248121 ST5P78524 1137 aa28.01■■■□□ 2.07
SYNGR3-201ENST00000248121 CCDC129Q6ZRS4 1044 aa28.01■■■□□ 2.07
SYNGR3-201ENST00000248121 SLC27A2O14975 620 aa28.01■■■□□ 2.07
SYNGR3-201ENST00000248121 CYP2E1P05181 493 aaPredicted RBP28.01■■■□□ 2.07
SYNGR3-201ENST00000248121 CASTP20810 708 aaKnown RBP28.01■■■□□ 2.07
SYNGR3-201ENST00000248121 MCAMP43121 646 aa28.01■■■□□ 2.07
SYNGR3-201ENST00000248121 PKP1Q13835 747 aa28.01■■■□□ 2.07
SYNGR3-201ENST00000248121 FLAD1Q8NFF5 587 aa28.01■■■□□ 2.07
SYNGR3-201ENST00000248121 BAG6P46379 1132 aa28■■■□□ 2.07
SYNGR3-201ENST00000248121 CCDC102BQ68D86 513 aa28■■■□□ 2.07
SYNGR3-201ENST00000248121 TM6SF1Q9BZW5 370 aa28■■■□□ 2.07
SYNGR3-201ENST00000248121 COL11A2P13942 1736 aaPredicted RBP28■■■□□ 2.07
SYNGR3-201ENST00000248121 MMP10P09238 476 aa27.99■■■□□ 2.07
SYNGR3-201ENST00000248121 SF3B2Q13435 895 aaKnown RBP27.99■■■□□ 2.07
SYNGR3-201ENST00000248121 MCMDC2Q4G0Z9 681 aa27.99■■■□□ 2.07
SYNGR3-201ENST00000248121 NLGN1Q8N2Q7 840 aa27.99■■■□□ 2.07
SYNGR3-201ENST00000248121 JAKMIP1Q96N16 626 aaKnown RBP27.99■■■□□ 2.07
SYNGR3-201ENST00000248121 ZSWIM6Q9HCJ5 1215 aa27.99■■■□□ 2.07
SYNGR3-201ENST00000248121 TAF6LQ9Y6J9 622 aa27.99■■■□□ 2.07
SYNGR3-201ENST00000248121 KCNJ4P48050 445 aa27.99■■■□□ 2.07
SYNGR3-201ENST00000248121 AK2P54819 239 aa27.99■■■□□ 2.07
SYNGR3-201ENST00000248121 FKBP4Q02790 459 aaKnown RBP eCLIP27.99■■■□□ 2.07
SYNGR3-201ENST00000248121 MYH7P12883 1935 aa27.99■■■□□ 2.07
SYNGR3-201ENST00000248121 ZAP70P43403 619 aa27.98■■■□□ 2.07
SYNGR3-201ENST00000248121 COL9A3Q14050 684 aaPredicted RBP27.98■■■□□ 2.07
SYNGR3-201ENST00000248121 CRY2Q49AN0 593 aa27.98■■■□□ 2.07
SYNGR3-201ENST00000248121 STK32BQ9NY57 414 aa27.98■■■□□ 2.07
SYNGR3-201ENST00000248121 RPAP1Q9BWH6 1393 aaPredicted RBP27.98■■■□□ 2.07
SYNGR3-201ENST00000248121 SLC5A1P13866 664 aa27.98■■■□□ 2.07
SYNGR3-201ENST00000248121 TICAM2Q86XR7 235 aa27.98■■■□□ 2.07
SYNGR3-201ENST00000248121 ZKSCAN1P17029 563 aaPredicted RBP27.97■■■□□ 2.07
SYNGR3-201ENST00000248121 RUFY3Q7L099 469 aa27.97■■■□□ 2.07
SYNGR3-201ENST00000248121 KLRK1P26718 216 aa27.96■■■□□ 2.07
SYNGR3-201ENST00000248121 INTS4Q96HW7 963 aaKnown RBP27.96■■■□□ 2.07
SYNGR3-201ENST00000248121 GRAPQ13588 217 aa27.96■■■□□ 2.07
SYNGR3-201ENST00000248121 ZMYM1Q5SVZ6 1142 aa27.96■■■□□ 2.07
SYNGR3-201ENST00000248121 GRAPLQ8TC17 118 aaPredicted RBP27.96■■■□□ 2.07
SYNGR3-201ENST00000248121 BCAMP50895 628 aa27.95■■■□□ 2.07
SYNGR3-201ENST00000248121 NUCB2P80303 420 aa27.95■■■□□ 2.07
SYNGR3-201ENST00000248121 CLEC17AQ6ZS10 378 aa27.95■■■□□ 2.07
SYNGR3-201ENST00000248121 ZDHHC9Q9Y397 364 aa27.95■■■□□ 2.07
SYNGR3-201ENST00000248121 ARID4AP29374 1257 aaPredicted RBP27.95■■■□□ 2.06
SYNGR3-201ENST00000248121 GSE1Q14687 1217 aa27.95■■■□□ 2.06
SYNGR3-201ENST00000248121 HELLSQ9NRZ9 838 aa27.95■■■□□ 2.06
SYNGR3-201ENST00000248121 CACNA1SQ13698 1873 aa27.94■■■□□ 2.06
SYNGR3-201ENST00000248121 RPGRQ92834 1020 aaKnown RBP27.94■■■□□ 2.06
SYNGR3-201ENST00000248121 LARP6Q9BRS8 491 aaKnown RBP27.94■■■□□ 2.06
SYNGR3-201ENST00000248121 TSGA10IPQ3SY00 556 aa27.93■■■□□ 2.06
SYNGR3-201ENST00000248121 VPS53Q5VIR6 699 aa27.93■■■□□ 2.06
SYNGR3-201ENST00000248121 RNF113AO15541 343 aaKnown RBP27.93■■■□□ 2.06
SYNGR3-201ENST00000248121 GBP4Q96PP9 640 aa27.93■■■□□ 2.06
SYNGR3-201ENST00000248121 CYP46A1Q9Y6A2 500 aa27.93■■■□□ 2.06
SYNGR3-201ENST00000248121 RNF20Q5VTR2 975 aa27.92■■■□□ 2.06
SYNGR3-201ENST00000248121 PDRG1Q9NUG6 133 aa27.92■■■□□ 2.06
SYNGR3-201ENST00000248121 DDX11L8A8MPP1 907 aa27.91■■■□□ 2.06
SYNGR3-201ENST00000248121 GYG1P46976 350 aa27.91■■■□□ 2.06
SYNGR3-201ENST00000248121 RASGRF1Q13972 1273 aa27.91■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms