RNA–Protein interactions for RNA: ENST00000243562.13

LTBP4-202, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 2

Gene LTBP4, Length 3,140 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-202ENST00000243562 IFIT1P09914 478 aaKnown RBP16.59■□□□□ 0.25
LTBP4-202ENST00000243562 HELLSQ9NRZ9 838 aa16.59■□□□□ 0.25
LTBP4-202ENST00000243562 TRMT1Q9NXH9 659 aaKnown RBP16.59■□□□□ 0.25
LTBP4-202ENST00000243562 SKILP12757 684 aa16.59■□□□□ 0.25
LTBP4-202ENST00000243562 CEP135Q66GS9 1140 aa16.59■□□□□ 0.25
LTBP4-202ENST00000243562 PAXBP1Q9Y5B6 917 aa16.59■□□□□ 0.25
LTBP4-202ENST00000243562 HSPD1P10809 573 aaKnown RBP16.58■□□□□ 0.24
LTBP4-202ENST00000243562 FKBP4Q02790 459 aaKnown RBP eCLIP16.58■□□□□ 0.24
LTBP4-202ENST00000243562 FAM160A1Q05DH4 1040 aa16.58■□□□□ 0.24
LTBP4-202ENST00000243562 NAA30Q147X3 362 aaPredicted RBP16.58■□□□□ 0.24
LTBP4-202ENST00000243562 TTLL5Q6EMB2 1281 aa16.58■□□□□ 0.24
LTBP4-202ENST00000243562 ANKRD7Q92527 254 aa16.58■□□□□ 0.24
LTBP4-202ENST00000243562 ZNF594Q96JF6 807 aaPredicted RBP16.58■□□□□ 0.24
LTBP4-202ENST00000243562 CHD2O14647 1828 aaKnown RBP16.58■□□□□ 0.24
LTBP4-202ENST00000243562 OTUD7BQ6GQQ9 843 aa16.58■□□□□ 0.24
LTBP4-202ENST00000243562 CEP57L1Q8IYX8 460 aa16.58■□□□□ 0.24
LTBP4-202ENST00000243562 AOPEPQ8N6M6 819 aa16.58■□□□□ 0.24
LTBP4-202ENST00000243562 PLBD2Q8NHP8 589 aa16.58■□□□□ 0.24
LTBP4-202ENST00000243562 SH3TC1Q8TE82 1336 aa16.58■□□□□ 0.24
LTBP4-202ENST00000243562 PDIA3P30101 505 aaKnown RBP16.57■□□□□ 0.24
LTBP4-202ENST00000243562 GORABQ5T7V8 394 aa16.57■□□□□ 0.24
LTBP4-202ENST00000243562 DSCC1Q9BVC3 393 aa16.57■□□□□ 0.24
LTBP4-202ENST00000243562 A0A1B0GVL5 298 aa16.57■□□□□ 0.24
LTBP4-202ENST00000243562 POLR3DP05423 398 aaPredicted RBP16.57■□□□□ 0.24
LTBP4-202ENST00000243562 CDC25BP30305 580 aa16.57■□□□□ 0.24
LTBP4-202ENST00000243562 HAND2P61296 217 aa16.57■□□□□ 0.24
LTBP4-202ENST00000243562 EXOSC10Q01780 885 aaKnown RBP16.57■□□□□ 0.24
LTBP4-202ENST00000243562 NCBP1Q09161 790 aaKnown RBP16.57■□□□□ 0.24
LTBP4-202ENST00000243562 SNW1Q13573 536 aaKnown RBP16.57■□□□□ 0.24
LTBP4-202ENST00000243562 WASHC4Q2M389 1173 aa16.57■□□□□ 0.24
LTBP4-202ENST00000243562 PROSER2Q86WR7 435 aaPredicted RBP16.57■□□□□ 0.24
LTBP4-202ENST00000243562 CCDC69A6NI79 296 aa16.56■□□□□ 0.24
LTBP4-202ENST00000243562 PTPN14Q15678 1187 aa16.56■□□□□ 0.24
LTBP4-202ENST00000243562 CHRNA2Q15822 529 aa16.56■□□□□ 0.24
LTBP4-202ENST00000243562 MRFAP1L1Q96HT8 127 aa16.56■□□□□ 0.24
LTBP4-202ENST00000243562 NAT10Q9H0A0 1025 aaKnown RBP16.56■□□□□ 0.24
LTBP4-202ENST00000243562 KDM6AO15550 1401 aaPredicted RBP16.56■□□□□ 0.24
LTBP4-202ENST00000243562 STK38Q15208 465 aa16.56■□□□□ 0.24
LTBP4-202ENST00000243562 LRP10Q7Z4F1 713 aa16.56■□□□□ 0.24
LTBP4-202ENST00000243562 RAB11FIP4Q86YS3 637 aa16.56■□□□□ 0.24
LTBP4-202ENST00000243562 DCAF5Q96JK2 942 aa16.56■□□□□ 0.24
LTBP4-202ENST00000243562 GPHNQ9NQX3 736 aaPredicted RBP16.56■□□□□ 0.24
LTBP4-202ENST00000243562 USP27XA6NNY8 438 aa16.56■□□□□ 0.24
LTBP4-202ENST00000243562 ZSCAN20P17040 1043 aaPredicted RBP16.56■□□□□ 0.24
LTBP4-202ENST00000243562 LRRC24Q50LG9 513 aa16.56■□□□□ 0.24
LTBP4-202ENST00000243562 ZMYM1Q5SVZ6 1142 aa16.56■□□□□ 0.24
LTBP4-202ENST00000243562 SARM1Q6SZW1 724 aa16.56■□□□□ 0.24
LTBP4-202ENST00000243562 CABLES1Q8TDN4 633 aa16.56■□□□□ 0.24
LTBP4-202ENST00000243562 RFX7Q2KHR2 1363 aa16.56■□□□□ 0.24
LTBP4-202ENST00000243562 RNF113AO15541 343 aaKnown RBP16.55■□□□□ 0.24
LTBP4-202ENST00000243562 MRPS27Q92552 414 aaKnown RBP16.55■□□□□ 0.24
LTBP4-202ENST00000243562 PCDHA7Q9UN72 937 aa16.55■□□□□ 0.24
LTBP4-202ENST00000243562 NEMFO60524 1076 aa16.55■□□□□ 0.24
LTBP4-202ENST00000243562 IL15P40933 162 aaPredicted RBP16.55■□□□□ 0.24
LTBP4-202ENST00000243562 FOXO4P98177 505 aa16.55■□□□□ 0.24
LTBP4-202ENST00000243562 ATG9AQ7Z3C6 839 aa16.55■□□□□ 0.24
LTBP4-202ENST00000243562 DDX17Q92841 729 aaKnown RBP16.55■□□□□ 0.24
LTBP4-202ENST00000243562 ZBTB3Q9H5J0 574 aa16.55■□□□□ 0.24
LTBP4-202ENST00000243562 CWC25Q9NXE8 425 aaPredicted RBP16.55■□□□□ 0.24
LTBP4-202ENST00000243562 CYP27B1O15528 508 aa16.54■□□□□ 0.24
LTBP4-202ENST00000243562 ATL3Q6DD88 541 aa16.54■□□□□ 0.24
LTBP4-202ENST00000243562 TTLL7Q6ZT98 887 aa16.54■□□□□ 0.24
LTBP4-202ENST00000243562 DHX40Q8IX18 779 aaKnown RBP16.54■□□□□ 0.24
LTBP4-202ENST00000243562 DHX37Q8IY37 1157 aaKnown RBP16.54■□□□□ 0.24
LTBP4-202ENST00000243562 FER1L4A9Z1Z3 1794 aa16.54■□□□□ 0.24
LTBP4-202ENST00000243562 MAST3O60307 1309 aa16.54■□□□□ 0.24
LTBP4-202ENST00000243562 A0A1B0GUL7 405 aa16.54■□□□□ 0.24
LTBP4-202ENST00000243562 CASP7P55210 303 aa16.54■□□□□ 0.24
LTBP4-202ENST00000243562 DMTNQ08495 405 aa16.54■□□□□ 0.24
LTBP4-202ENST00000243562 ENGASEQ8NFI3 743 aa16.54■□□□□ 0.24
LTBP4-202ENST00000243562 ZNF274Q96GC6 653 aaPredicted RBP16.54■□□□□ 0.24
LTBP4-202ENST00000243562 BIN1O00499 593 aa16.54■□□□□ 0.24
LTBP4-202ENST00000243562 PLCD3Q8N3E9 789 aa16.54■□□□□ 0.24
LTBP4-202ENST00000243562 CHMP4CQ96CF2 233 aa16.54■□□□□ 0.24
LTBP4-202ENST00000243562 C8orf76Q96K31 380 aa16.54■□□□□ 0.24
LTBP4-202ENST00000243562 ZNF330Q9Y3S2 320 aaPredicted RBP16.54■□□□□ 0.24
LTBP4-202ENST00000243562 CPLX1O14810 134 aa16.53■□□□□ 0.24
LTBP4-202ENST00000243562 SMC2O95347 1197 aa16.53■□□□□ 0.24
LTBP4-202ENST00000243562 CCDC85AQ96PX6 553 aaPredicted RBP16.53■□□□□ 0.24
LTBP4-202ENST00000243562 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.53■□□□□ 0.24
LTBP4-202ENST00000243562 V9GYY5 206 aaPredicted RBP16.53■□□□□ 0.24
LTBP4-202ENST00000243562 H7C1W4 665 aa16.53■□□□□ 0.24
LTBP4-202ENST00000243562 M0R2C6 588 aa16.53■□□□□ 0.24
LTBP4-202ENST00000243562 IGSF3O75054 1194 aa16.53■□□□□ 0.24
LTBP4-202ENST00000243562 CEP126Q9P2H0 1117 aa16.53■□□□□ 0.24
LTBP4-202ENST00000243562 CARMIL3Q8ND23 1372 aa16.53■□□□□ 0.24
LTBP4-202ENST00000243562 EYA2O00167 538 aa16.52■□□□□ 0.24
LTBP4-202ENST00000243562 NDUFA8P51970 172 aa16.52■□□□□ 0.24
LTBP4-202ENST00000243562 SYNE3Q6ZMZ3 975 aa16.52■□□□□ 0.24
LTBP4-202ENST00000243562 ILDR1Q86SU0 546 aaPredicted RBP16.52■□□□□ 0.24
LTBP4-202ENST00000243562 PUS3Q9BZE2 481 aaKnown RBP16.52■□□□□ 0.24
LTBP4-202ENST00000243562 CLIC4Q9Y696 253 aa16.52■□□□□ 0.24
LTBP4-202ENST00000243562 MRC1P22897 1456 aa16.52■□□□□ 0.24
LTBP4-202ENST00000243562 HSP90AB3PQ58FF7 597 aa16.52■□□□□ 0.24
LTBP4-202ENST00000243562 PALLDQ8WX93 1383 aa16.52■□□□□ 0.23
LTBP4-202ENST00000243562 A1BGP04217 495 aa16.52■□□□□ 0.23
LTBP4-202ENST00000243562 FDPSP14324 419 aaKnown RBP16.52■□□□□ 0.23
LTBP4-202ENST00000243562 TTC39AQ5SRH9 613 aa16.52■□□□□ 0.23
LTBP4-202ENST00000243562 ADALQ6DHV7 355 aa16.52■□□□□ 0.23
LTBP4-202ENST00000243562 OSBP2Q969R2 916 aa16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms