RNA–Protein interactions for RNA: ENST00000231130.3

PCDHB3-201, Transcript of protocadherin beta 3, humanhuman

APPRIS P1 BASIC

Gene PCDHB3, Length 3,355 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3-201ENST00000231130 NBPF6Q5VWK0 638 aa16.43■□□□□ 0.22
PCDHB3-201ENST00000231130 MRFAP1L1Q96HT8 127 aa16.43■□□□□ 0.22
PCDHB3-201ENST00000231130 NBPF4Q96M43 638 aa16.43■□□□□ 0.22
PCDHB3-201ENST00000231130 AMOTL2Q9Y2J4 779 aa16.43■□□□□ 0.22
PCDHB3-201ENST00000231130 GRM8O00222 908 aa16.42■□□□□ 0.22
PCDHB3-201ENST00000231130 ADCY9O60503 1353 aa16.42■□□□□ 0.22
PCDHB3-201ENST00000231130 NYAP1Q6ZVC0 841 aa16.42■□□□□ 0.22
PCDHB3-201ENST00000231130 CTR9Q6PD62 1173 aa16.41■□□□□ 0.22
PCDHB3-201ENST00000231130 PATL2C9JE40 543 aaKnown RBP16.41■□□□□ 0.22
PCDHB3-201ENST00000231130 LTKP29376 864 aa16.41■□□□□ 0.22
PCDHB3-201ENST00000231130 SLC39A6Q13433 755 aa16.41■□□□□ 0.22
PCDHB3-201ENST00000231130 STK38Q15208 465 aa16.41■□□□□ 0.22
PCDHB3-201ENST00000231130 RBM43Q6ZSC3 357 aaKnown RBP16.41■□□□□ 0.22
PCDHB3-201ENST00000231130 CEBPAP49715 358 aaPredicted RBP16.41■□□□□ 0.22
PCDHB3-201ENST00000231130 A0A1B0GUL7 405 aa16.4■□□□□ 0.22
PCDHB3-201ENST00000231130 CLGNO14967 610 aa16.4■□□□□ 0.22
PCDHB3-201ENST00000231130 CHRM1P11229 460 aaPredicted RBP16.4■□□□□ 0.22
PCDHB3-201ENST00000231130 SMC1AQ14683 1233 aaKnown RBP16.4■□□□□ 0.22
PCDHB3-201ENST00000231130 E4F1Q66K89 784 aaPredicted RBP16.4■□□□□ 0.22
PCDHB3-201ENST00000231130 TTLL5Q6EMB2 1281 aa16.4■□□□□ 0.22
PCDHB3-201ENST00000231130 KSR2Q6VAB6 950 aa16.4■□□□□ 0.22
PCDHB3-201ENST00000231130 NAT10Q9H0A0 1025 aaKnown RBP16.4■□□□□ 0.22
PCDHB3-201ENST00000231130 ZSCAN16Q9H4T2 348 aaPredicted RBP16.4■□□□□ 0.22
PCDHB3-201ENST00000231130 GPHNQ9NQX3 736 aaPredicted RBP16.4■□□□□ 0.22
PCDHB3-201ENST00000231130 NEMFO60524 1076 aa16.4■□□□□ 0.22
PCDHB3-201ENST00000231130 FAM193AP78312 1265 aa16.4■□□□□ 0.22
PCDHB3-201ENST00000231130 PEAK1Q9H792 1746 aa16.4■□□□□ 0.22
PCDHB3-201ENST00000231130 PPP1R13BQ96KQ4 1090 aa16.4■□□□□ 0.22
PCDHB3-201ENST00000231130 ZSWIM4Q9H7M6 989 aa16.4■□□□□ 0.22
PCDHB3-201ENST00000231130 NRDCO43847 1150 aa16.39■□□□□ 0.21
PCDHB3-201ENST00000231130 NDUFA8P51970 172 aa16.39■□□□□ 0.21
PCDHB3-201ENST00000231130 HAND2P61296 217 aa16.39■□□□□ 0.21
PCDHB3-201ENST00000231130 FAM160A1Q05DH4 1040 aa16.39■□□□□ 0.21
PCDHB3-201ENST00000231130 TFCP2Q12800 502 aa16.39■□□□□ 0.21
PCDHB3-201ENST00000231130 EPHA10Q5JZY3 1008 aa16.39■□□□□ 0.21
PCDHB3-201ENST00000231130 KCNB2Q92953 911 aa16.39■□□□□ 0.21
PCDHB3-201ENST00000231130 KAZALD1Q96I82 304 aa16.39■□□□□ 0.21
PCDHB3-201ENST00000231130 DBNDD2Q9BQY9 259 aa16.39■□□□□ 0.21
PCDHB3-201ENST00000231130 KDRP35968 1356 aa16.39■□□□□ 0.21
PCDHB3-201ENST00000231130 MARCKSP29966 332 aaPredicted RBP16.39■□□□□ 0.21
PCDHB3-201ENST00000231130 MYD88Q99836 296 aa16.39■□□□□ 0.21
PCDHB3-201ENST00000231130 PCDHA7Q9UN72 937 aa16.39■□□□□ 0.21
PCDHB3-201ENST00000231130 ATP5J2-PTCD1G3V325 749 aa16.38■□□□□ 0.21
PCDHB3-201ENST00000231130 PTCD1O75127 700 aaKnown RBP16.38■□□□□ 0.21
PCDHB3-201ENST00000231130 ATP1A3P13637 1013 aa16.38■□□□□ 0.21
PCDHB3-201ENST00000231130 C1orf141Q5JVX7 400 aa16.38■□□□□ 0.21
PCDHB3-201ENST00000231130 ARMCX5Q6P1M9 558 aa16.38■□□□□ 0.21
PCDHB3-201ENST00000231130 STOX1Q6ZVD7 989 aa16.38■□□□□ 0.21
PCDHB3-201ENST00000231130 PDILTQ8N807 584 aa16.38■□□□□ 0.21
PCDHB3-201ENST00000231130 NCAPGQ9BPX3 1015 aa16.38■□□□□ 0.21
PCDHB3-201ENST00000231130 CARD6Q9BX69 1037 aa16.38■□□□□ 0.21
PCDHB3-201ENST00000231130 YY1AP1Q9H869 796 aa16.38■□□□□ 0.21
PCDHB3-201ENST00000231130 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.38■□□□□ 0.21
PCDHB3-201ENST00000231130 GOLIM4O00461 696 aa16.38■□□□□ 0.21
PCDHB3-201ENST00000231130 SRLQ86TD4 932 aa16.38■□□□□ 0.21
PCDHB3-201ENST00000231130 NFATC2IPQ8NCF5 419 aa16.38■□□□□ 0.21
PCDHB3-201ENST00000231130 NSUN7Q8NE18 718 aaKnown RBP16.38■□□□□ 0.21
PCDHB3-201ENST00000231130 ZNF396Q96N95 335 aaPredicted RBP16.38■□□□□ 0.21
PCDHB3-201ENST00000231130 UTP14AQ9BVJ6 771 aaKnown RBP16.38■□□□□ 0.21
PCDHB3-201ENST00000231130 USP42Q9H9J4 1324 aaKnown RBP16.38■□□□□ 0.21
PCDHB3-201ENST00000231130 HMG20BQ9P0W2 317 aa16.38■□□□□ 0.21
PCDHB3-201ENST00000231130 DBNLQ9UJU6 430 aaKnown RBP16.38■□□□□ 0.21
PCDHB3-201ENST00000231130 CTAGE5O15320 804 aa16.37■□□□□ 0.21
PCDHB3-201ENST00000231130 SERPINC1P01008 464 aa16.37■□□□□ 0.21
PCDHB3-201ENST00000231130 CDC25BP30305 580 aa16.37■□□□□ 0.21
PCDHB3-201ENST00000231130 KRT32Q14532 448 aa16.37■□□□□ 0.21
PCDHB3-201ENST00000231130 NBPF11Q86T75 865 aa16.37■□□□□ 0.21
PCDHB3-201ENST00000231130 H2AFXP16104 143 aaPredicted RBP16.37■□□□□ 0.21
PCDHB3-201ENST00000231130 SARM1Q6SZW1 724 aa16.37■□□□□ 0.21
PCDHB3-201ENST00000231130 SIRT1Q96EB6 747 aa16.37■□□□□ 0.21
PCDHB3-201ENST00000231130 ADD1P35611 737 aaKnown RBP16.37■□□□□ 0.21
PCDHB3-201ENST00000231130 CFAP100Q494V2 611 aa16.37■□□□□ 0.21
PCDHB3-201ENST00000231130 MRPS27Q92552 414 aaKnown RBP16.37■□□□□ 0.21
PCDHB3-201ENST00000231130 RCOR1Q9UKL0 485 aa16.37■□□□□ 0.21
PCDHB3-201ENST00000231130 CLIC4Q9Y696 253 aa16.37■□□□□ 0.21
PCDHB3-201ENST00000231130 NPHP4O75161 1426 aaPredicted RBP16.36■□□□□ 0.21
PCDHB3-201ENST00000231130 CAVIN2O95810 425 aa16.36■□□□□ 0.21
PCDHB3-201ENST00000231130 MCM6Q14566 821 aa16.36■□□□□ 0.21
PCDHB3-201ENST00000231130 USP31Q70CQ4 1352 aa16.36■□□□□ 0.21
PCDHB3-201ENST00000231130 GSDMDP57764 484 aa16.36■□□□□ 0.21
PCDHB3-201ENST00000231130 NEXNQ0ZGT2 675 aa16.36■□□□□ 0.21
PCDHB3-201ENST00000231130 HSP90AB3PQ58FF7 597 aa16.36■□□□□ 0.21
PCDHB3-201ENST00000231130 FAM53CQ9NYF3 392 aa16.36■□□□□ 0.21
PCDHB3-201ENST00000231130 VPS18Q9P253 973 aa16.36■□□□□ 0.21
PCDHB3-201ENST00000231130 KIF2AO00139 706 aaPredicted RBP16.35■□□□□ 0.21
PCDHB3-201ENST00000231130 CTDNEP1O95476 244 aa16.35■□□□□ 0.21
PCDHB3-201ENST00000231130 SLC3A2P08195 630 aaKnown RBP16.35■□□□□ 0.21
PCDHB3-201ENST00000231130 UBE3BQ7Z3V4 1068 aa16.35■□□□□ 0.21
PCDHB3-201ENST00000231130 COL15A1P39059 1388 aa16.35■□□□□ 0.21
PCDHB3-201ENST00000231130 PHACTR2O75167 634 aa16.35■□□□□ 0.21
PCDHB3-201ENST00000231130 MUM1L1Q5H9M0 696 aa16.35■□□□□ 0.21
PCDHB3-201ENST00000231130 LINS1Q8NG48 757 aa16.35■□□□□ 0.21
PCDHB3-201ENST00000231130 PLEKHA4Q9H4M7 779 aa16.35■□□□□ 0.21
PCDHB3-201ENST00000231130 GUCY2CP25092 1073 aa16.35■□□□□ 0.21
PCDHB3-201ENST00000231130 EVCP57679 992 aa16.35■□□□□ 0.21
PCDHB3-201ENST00000231130 FBXO18Q8NFZ0 1043 aa16.35■□□□□ 0.21
PCDHB3-201ENST00000231130 ADAM21Q9UKJ8 722 aa16.35■□□□□ 0.21
PCDHB3-201ENST00000231130 ERBB3P21860 1342 aa16.34■□□□□ 0.21
PCDHB3-201ENST00000231130 ALDH1L1O75891 902 aa16.34■□□□□ 0.21
PCDHB3-201ENST00000231130 DDX58O95786 925 aaKnown RBP16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms