RNA–Protein interactions for RNA: ENST00000228916.6

SCNN1A-201, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCNN1A, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-201ENST00000228916 DHX32Q7L7V1 743 aaKnown RBP16.31■□□□□ 0.2
SCNN1A-201ENST00000228916 MRPS27Q92552 414 aaKnown RBP16.31■□□□□ 0.2
SCNN1A-201ENST00000228916 DDX58O95786 925 aaKnown RBP16.3■□□□□ 0.2
SCNN1A-201ENST00000228916 PDIA6Q15084 440 aa16.3■□□□□ 0.2
SCNN1A-201ENST00000228916 MCMDC2Q4G0Z9 681 aa16.3■□□□□ 0.2
SCNN1A-201ENST00000228916 SYT10Q6XYQ8 523 aa16.3■□□□□ 0.2
SCNN1A-201ENST00000228916 LRRN4CLQ8ND94 238 aa16.3■□□□□ 0.2
SCNN1A-201ENST00000228916 ERCC4Q92889 916 aaPredicted RBP16.3■□□□□ 0.2
SCNN1A-201ENST00000228916 A0A1W2PQ27 194 aa16.3■□□□□ 0.2
SCNN1A-201ENST00000228916 A0A1W2PQ64 194 aa16.3■□□□□ 0.2
SCNN1A-201ENST00000228916 A0A1W2PQD8 194 aa16.3■□□□□ 0.2
SCNN1A-201ENST00000228916 GTF2E1P29083 439 aaPredicted RBP16.3■□□□□ 0.2
SCNN1A-201ENST00000228916 CLCN6P51797 869 aa16.3■□□□□ 0.2
SCNN1A-201ENST00000228916 FGD1P98174 961 aa16.3■□□□□ 0.2
SCNN1A-201ENST00000228916 TIGD1Q96MW7 591 aa16.3■□□□□ 0.2
SCNN1A-201ENST00000228916 SEC62Q99442 399 aaKnown RBP16.3■□□□□ 0.2
SCNN1A-201ENST00000228916 XPO4Q9C0E2 1151 aaKnown RBP16.3■□□□□ 0.2
SCNN1A-201ENST00000228916 PCDHA7Q9UN72 937 aa16.3■□□□□ 0.2
SCNN1A-201ENST00000228916 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.3■□□□□ 0.2
SCNN1A-201ENST00000228916 NEDD4P46934 1319 aa16.3■□□□□ 0.2
SCNN1A-201ENST00000228916 CHGBP05060 677 aa16.3■□□□□ 0.2
SCNN1A-201ENST00000228916 AMOTQ4VCS5 1084 aa16.3■□□□□ 0.2
SCNN1A-201ENST00000228916 ADALQ6DHV7 355 aa16.3■□□□□ 0.2
SCNN1A-201ENST00000228916 KIAA1468Q9P260 1216 aa16.3■□□□□ 0.2
SCNN1A-201ENST00000228916 FOSBP53539 338 aa16.29■□□□□ 0.2
SCNN1A-201ENST00000228916 EXOSC10Q01780 885 aaKnown RBP16.29■□□□□ 0.2
SCNN1A-201ENST00000228916 DPCR1Q3MIW9 517 aa16.29■□□□□ 0.2
SCNN1A-201ENST00000228916 NOL10Q9BSC4 688 aaKnown RBP16.29■□□□□ 0.2
SCNN1A-201ENST00000228916 COPRSQ9NQ92 184 aa16.29■□□□□ 0.2
SCNN1A-201ENST00000228916 DDX21Q9NR30 783 aaKnown RBP eCLIP16.29■□□□□ 0.2
SCNN1A-201ENST00000228916 CALCOCO1Q9P1Z2 691 aa16.29■□□□□ 0.2
SCNN1A-201ENST00000228916 NPHP1O15259 732 aa16.29■□□□□ 0.2
SCNN1A-201ENST00000228916 SFPQP23246 707 aaKnown RBP eCLIP16.29■□□□□ 0.2
SCNN1A-201ENST00000228916 CYP2C19P33261 490 aa16.29■□□□□ 0.2
SCNN1A-201ENST00000228916 RTEL1Q9NZ71 1219 aa16.29■□□□□ 0.2
SCNN1A-201ENST00000228916 PHRF1Q9P1Y6 1649 aaKnown RBP16.28■□□□□ 0.2
SCNN1A-201ENST00000228916 APOBRQ0VD83 1088 aa16.28■□□□□ 0.2
SCNN1A-201ENST00000228916 TNNI3KQ59H18 835 aa16.28■□□□□ 0.2
SCNN1A-201ENST00000228916 EPHA10Q5JZY3 1008 aa16.28■□□□□ 0.2
SCNN1A-201ENST00000228916 TMC6Q7Z403 805 aa16.28■□□□□ 0.2
SCNN1A-201ENST00000228916 SDF4Q9BRK5 362 aa16.28■□□□□ 0.2
SCNN1A-201ENST00000228916 IFNKQ9P0W0 207 aa16.28■□□□□ 0.2
SCNN1A-201ENST00000228916 NDUFB9Q9Y6M9 179 aa16.28■□□□□ 0.2
SCNN1A-201ENST00000228916 FPGT-TNNI3KV9GXZ4 949 aa16.28■□□□□ 0.2
SCNN1A-201ENST00000228916 SIPA1L3O60292 1781 aaPredicted RBP16.28■□□□□ 0.2
SCNN1A-201ENST00000228916 PNMA6AP0CW24 399 aaPredicted RBP16.28■□□□□ 0.2
SCNN1A-201ENST00000228916 KCNH5Q8NCM2 988 aa16.28■□□□□ 0.2
SCNN1A-201ENST00000228916 BBXQ8WY36 941 aaPredicted RBP16.28■□□□□ 0.2
SCNN1A-201ENST00000228916 ZRANB2O95218 330 aaKnown RBP eCLIP16.28■□□□□ 0.2
SCNN1A-201ENST00000228916 PSME1Q06323 249 aa16.28■□□□□ 0.2
SCNN1A-201ENST00000228916 SH3TC1Q8TE82 1336 aa16.27■□□□□ 0.2
SCNN1A-201ENST00000228916 SMC2O95347 1197 aa16.27■□□□□ 0.2
SCNN1A-201ENST00000228916 NDUFA8P51970 172 aa16.27■□□□□ 0.2
SCNN1A-201ENST00000228916 HAUS7Q99871 368 aa16.27■□□□□ 0.2
SCNN1A-201ENST00000228916 PHLPP2Q6ZVD8 1323 aa16.27■□□□□ 0.2
SCNN1A-201ENST00000228916 A0A1B0GVL5 298 aa16.27■□□□□ 0.19
SCNN1A-201ENST00000228916 NEURL1BA8MQ27 555 aa16.27■□□□□ 0.19
SCNN1A-201ENST00000228916 PLA2G4AP47712 749 aa16.27■□□□□ 0.19
SCNN1A-201ENST00000228916 ETF1P62495 437 aaKnown RBP16.27■□□□□ 0.19
SCNN1A-201ENST00000228916 IRX5P78411 483 aaPredicted RBP16.27■□□□□ 0.19
SCNN1A-201ENST00000228916 ARHGAP29Q52LW3 1261 aa16.27■□□□□ 0.19
SCNN1A-201ENST00000228916 FBXW7Q969H0 707 aa16.27■□□□□ 0.19
SCNN1A-201ENST00000228916 ERICH4A6NGS2 130 aa16.26■□□□□ 0.19
SCNN1A-201ENST00000228916 RFX5P48382 616 aaPredicted RBP16.26■□□□□ 0.19
SCNN1A-201ENST00000228916 NCAPHQ15003 741 aa16.26■□□□□ 0.19
SCNN1A-201ENST00000228916 ESCO1Q5FWF5 840 aa16.26■□□□□ 0.19
SCNN1A-201ENST00000228916 CARMIL3Q8ND23 1372 aa16.26■□□□□ 0.19
SCNN1A-201ENST00000228916 ZBTB22O15209 634 aa16.26■□□□□ 0.19
SCNN1A-201ENST00000228916 NRDCO43847 1150 aa16.26■□□□□ 0.19
SCNN1A-201ENST00000228916 CCT2P78371 535 aaKnown RBP16.26■□□□□ 0.19
SCNN1A-201ENST00000228916 GCKRQ14397 625 aa16.26■□□□□ 0.19
SCNN1A-201ENST00000228916 RIC3Q7Z5B4 369 aa16.26■□□□□ 0.19
SCNN1A-201ENST00000228916 LINC00301Q8NCQ3 95 aa16.26■□□□□ 0.19
SCNN1A-201ENST00000228916 NCOA5Q9HCD5 579 aaKnown RBP16.26■□□□□ 0.19
SCNN1A-201ENST00000228916 GUCY1B3Q02153 619 aa16.25■□□□□ 0.19
SCNN1A-201ENST00000228916 TFCP2Q12800 502 aa16.25■□□□□ 0.19
SCNN1A-201ENST00000228916 SYTL4Q96C24 671 aaPredicted RBP16.25■□□□□ 0.19
SCNN1A-201ENST00000228916 ZNF274Q96GC6 653 aaPredicted RBP16.25■□□□□ 0.19
SCNN1A-201ENST00000228916 MYL6BP14649 208 aa16.25■□□□□ 0.19
SCNN1A-201ENST00000228916 PDIA3P30101 505 aaKnown RBP16.25■□□□□ 0.19
SCNN1A-201ENST00000228916 PTPN12Q05209 780 aaKnown RBP16.25■□□□□ 0.19
SCNN1A-201ENST00000228916 DNAJC2Q99543 621 aaKnown RBP16.25■□□□□ 0.19
SCNN1A-201ENST00000228916 ORC3Q9UBD5 711 aaPredicted RBP16.25■□□□□ 0.19
SCNN1A-201ENST00000228916 TULP2O00295 520 aa16.25■□□□□ 0.19
SCNN1A-201ENST00000228916 CCP110O43303 1012 aa16.25■□□□□ 0.19
SCNN1A-201ENST00000228916 NLRP12P59046 1061 aa16.25■□□□□ 0.19
SCNN1A-201ENST00000228916 KBTBD3Q8NAB2 608 aa16.25■□□□□ 0.19
SCNN1A-201ENST00000228916 DSCC1Q9BVC3 393 aa16.25■□□□□ 0.19
SCNN1A-201ENST00000228916 GCP02774 474 aa16.24■□□□□ 0.19
SCNN1A-201ENST00000228916 FDPSP14324 419 aaKnown RBP16.24■□□□□ 0.19
SCNN1A-201ENST00000228916 SLC39A6Q13433 755 aa16.24■□□□□ 0.19
SCNN1A-201ENST00000228916 ZRSR1Q15695 479 aaKnown RBP16.24■□□□□ 0.19
SCNN1A-201ENST00000228916 ARHGEF25Q86VW2 580 aa16.24■□□□□ 0.19
SCNN1A-201ENST00000228916 ANKRD24Q8TF21 1146 aa16.24■□□□□ 0.19
SCNN1A-201ENST00000228916 AXIN2Q9Y2T1 843 aa16.24■□□□□ 0.19
SCNN1A-201ENST00000228916 TPM4P67936 248 aa16.24■□□□□ 0.19
SCNN1A-201ENST00000228916 TRIM65Q6PJ69 517 aa16.24■□□□□ 0.19
SCNN1A-201ENST00000228916 KCNG4Q8TDN1 519 aa16.24■□□□□ 0.19
SCNN1A-201ENST00000228916 CHMP4CQ96CF2 233 aa16.24■□□□□ 0.19
SCNN1A-201ENST00000228916 DBNDD2Q9BQY9 259 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms