RNA–Protein interactions for RNA: ENST00000223129.8

RPA3-201, Transcript of replication protein A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPA3, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-201ENST00000223129 COL4A5P29400 1685 aa18.53■□□□□ 0.56
RPA3-201ENST00000223129 IRS2Q9Y4H2 1338 aa18.53■□□□□ 0.56
RPA3-201ENST00000223129 ATP2B3Q16720 1220 aa18.52■□□□□ 0.56
RPA3-201ENST00000223129 RAB11FIP3O75154 756 aa18.52■□□□□ 0.55
RPA3-201ENST00000223129 ERC1Q8IUD2 1116 aa18.52■□□□□ 0.55
RPA3-201ENST00000223129 LPIN2Q92539 896 aa18.52■□□□□ 0.55
RPA3-201ENST00000223129 MED23Q9ULK4 1368 aa18.51■□□□□ 0.55
RPA3-201ENST00000223129 A0A1B0GUL7 405 aa18.51■□□□□ 0.55
RPA3-201ENST00000223129 SMARCA5O60264 1052 aaPredicted RBP18.51■□□□□ 0.55
RPA3-201ENST00000223129 GYG1P46976 350 aa18.51■□□□□ 0.55
RPA3-201ENST00000223129 KIF1BPQ96EK5 621 aa18.51■□□□□ 0.55
RPA3-201ENST00000223129 NEUROD6Q96NK8 337 aa18.51■□□□□ 0.55
RPA3-201ENST00000223129 VPS33BQ9H267 617 aa18.51■□□□□ 0.55
RPA3-201ENST00000223129 DBNDD1Q9H9R9 158 aa18.51■□□□□ 0.55
RPA3-201ENST00000223129 IFIT1P09914 478 aaKnown RBP18.5■□□□□ 0.55
RPA3-201ENST00000223129 SLC5A1P13866 664 aa18.5■□□□□ 0.55
RPA3-201ENST00000223129 TNNI3KQ59H18 835 aa18.5■□□□□ 0.55
RPA3-201ENST00000223129 AKAP2Q9Y2D5 859 aa18.5■□□□□ 0.55
RPA3-201ENST00000223129 FPGT-TNNI3KV9GXZ4 949 aa18.5■□□□□ 0.55
RPA3-201ENST00000223129 ADORA1P30542 326 aa18.5■□□□□ 0.55
RPA3-201ENST00000223129 FAM84BQ96KN1 310 aaPredicted RBP18.5■□□□□ 0.55
RPA3-201ENST00000223129 G3V3G9 751 aa18.49■□□□□ 0.55
RPA3-201ENST00000223129 DCAF8Q5TAQ9 597 aa18.49■□□□□ 0.55
RPA3-201ENST00000223129 C15orf52Q6ZUT6 534 aaKnown RBP18.49■□□□□ 0.55
RPA3-201ENST00000223129 JDP2Q8WYK2 163 aa18.49■□□□□ 0.55
RPA3-201ENST00000223129 EAF2Q96CJ1 260 aaPredicted RBP18.49■□□□□ 0.55
RPA3-201ENST00000223129 LRRCC1Q9C099 1032 aa18.49■□□□□ 0.55
RPA3-201ENST00000223129 DICER1Q9UPY3 1922 aaKnown RBP18.49■□□□□ 0.55
RPA3-201ENST00000223129 BCAMP50895 628 aa18.49■□□□□ 0.55
RPA3-201ENST00000223129 NIM1KQ8IY84 436 aa18.49■□□□□ 0.55
RPA3-201ENST00000223129 CCDC8Q9H0W5 538 aaPredicted RBP18.49■□□□□ 0.55
RPA3-201ENST00000223129 GPR108Q9NPR9 543 aa18.49■□□□□ 0.55
RPA3-201ENST00000223129 ECE2O60344 883 aa18.48■□□□□ 0.55
RPA3-201ENST00000223129 GCC1Q96CN9 775 aa18.48■□□□□ 0.55
RPA3-201ENST00000223129 XAGE2Q96GT9 111 aa18.48■□□□□ 0.55
RPA3-201ENST00000223129 KCNQ5Q9NR82 932 aa18.48■□□□□ 0.55
RPA3-201ENST00000223129 ZNF609O15014 1411 aa18.48■□□□□ 0.55
RPA3-201ENST00000223129 YDJCA8MPS7 323 aa18.47■□□□□ 0.55
RPA3-201ENST00000223129 B4GALNT3Q6L9W6 998 aa18.47■□□□□ 0.55
RPA3-201ENST00000223129 TLR7Q9NYK1 1049 aaKnown RBP18.47■□□□□ 0.55
RPA3-201ENST00000223129 HIBADHP31937 336 aaKnown RBP18.47■□□□□ 0.55
RPA3-201ENST00000223129 CAVIN4Q5BKX8 364 aa18.47■□□□□ 0.55
RPA3-201ENST00000223129 ANKRD45Q5TZF3 282 aa18.47■□□□□ 0.55
RPA3-201ENST00000223129 FBXO33Q7Z6M2 555 aa18.47■□□□□ 0.55
RPA3-201ENST00000223129 AACSQ86V21 672 aa18.47■□□□□ 0.55
RPA3-201ENST00000223129 CLASRPQ8N2M8 674 aaKnown RBP18.47■□□□□ 0.55
RPA3-201ENST00000223129 DBNDD2Q9BQY9 259 aa18.47■□□□□ 0.55
RPA3-201ENST00000223129 CD209Q9NNX6 404 aa18.47■□□□□ 0.55
RPA3-201ENST00000223129 ZNF804AQ7Z570 1209 aa18.46■□□□□ 0.55
RPA3-201ENST00000223129 VPS37DQ86XT2 251 aa18.46■□□□□ 0.55
RPA3-201ENST00000223129 SMC5Q8IY18 1101 aa18.46■□□□□ 0.55
RPA3-201ENST00000223129 COA1Q9GZY4 146 aa18.46■□□□□ 0.55
RPA3-201ENST00000223129 ZNRF3Q9ULT6 936 aa18.46■□□□□ 0.55
RPA3-201ENST00000223129 IQSEC3Q9UPP2 1182 aaPredicted RBP18.46■□□□□ 0.55
RPA3-201ENST00000223129 CHD4Q14839 1912 aa18.46■□□□□ 0.55
RPA3-201ENST00000223129 FZD9O00144 591 aa18.45■□□□□ 0.54
RPA3-201ENST00000223129 PHKA1P46020 1223 aa18.45■□□□□ 0.54
RPA3-201ENST00000223129 DBNLQ9UJU6 430 aaKnown RBP18.45■□□□□ 0.54
RPA3-201ENST00000223129 TIAM2Q8IVF5 1701 aa18.44■□□□□ 0.54
RPA3-201ENST00000223129 RAD17O75943 681 aa18.44■□□□□ 0.54
RPA3-201ENST00000223129 GORABQ5T7V8 394 aa18.44■□□□□ 0.54
RPA3-201ENST00000223129 CCDC102BQ68D86 513 aa18.44■□□□□ 0.54
RPA3-201ENST00000223129 PODNQ7Z5L7 613 aa18.44■□□□□ 0.54
RPA3-201ENST00000223129 C16orf71Q8IYS4 520 aaPredicted RBP18.44■□□□□ 0.54
RPA3-201ENST00000223129 ARAP2Q8WZ64 1704 aa18.43■□□□□ 0.54
RPA3-201ENST00000223129 SCN9AQ15858 1988 aa18.43■□□□□ 0.54
RPA3-201ENST00000223129 ZNF541Q9H0D2 1346 aa18.43■□□□□ 0.54
RPA3-201ENST00000223129 IL1R1P14778 569 aa18.43■□□□□ 0.54
RPA3-201ENST00000223129 CXCL9Q07325 125 aa18.43■□□□□ 0.54
RPA3-201ENST00000223129 TDRD7Q8NHU6 1098 aaKnown RBP18.43■□□□□ 0.54
RPA3-201ENST00000223129 CCDC136Q96JN2 1154 aa18.43■□□□□ 0.54
RPA3-201ENST00000223129 JAG2Q9Y219 1238 aa18.43■□□□□ 0.54
RPA3-201ENST00000223129 IFIT2P09913 472 aaKnown RBP18.42■□□□□ 0.54
RPA3-201ENST00000223129 EIF6P56537 245 aaKnown RBP18.42■□□□□ 0.54
RPA3-201ENST00000223129 ERICH6BQ5W0A0 696 aa18.42■□□□□ 0.54
RPA3-201ENST00000223129 FBXW7Q969H0 707 aa18.42■□□□□ 0.54
RPA3-201ENST00000223129 FRAT2O75474 233 aaPredicted RBP18.41■□□□□ 0.54
RPA3-201ENST00000223129 GTF2IP78347 998 aa18.41■□□□□ 0.54
RPA3-201ENST00000223129 LNPKQ9C0E8 428 aa18.41■□□□□ 0.54
RPA3-201ENST00000223129 PSMD14O00487 310 aa18.4■□□□□ 0.54
RPA3-201ENST00000223129 CIAPIN1Q6FI81 312 aa18.4■□□□□ 0.54
RPA3-201ENST00000223129 PPP4R2Q9NY27 417 aa18.4■□□□□ 0.54
RPA3-201ENST00000223129 ZBTB47Q9UFB7 747 aaPredicted RBP18.4■□□□□ 0.54
RPA3-201ENST00000223129 GJA3Q9Y6H8 435 aa18.4■□□□□ 0.54
RPA3-201ENST00000223129 DDNO94850 711 aaPredicted RBP18.4■□□□□ 0.54
RPA3-201ENST00000223129 NUCB1Q02818 461 aa18.4■□□□□ 0.54
RPA3-201ENST00000223129 CCDC158Q5M9N0 1113 aa18.4■□□□□ 0.54
RPA3-201ENST00000223129 TTLL5Q6EMB2 1281 aa18.4■□□□□ 0.54
RPA3-201ENST00000223129 OTUD7AQ8TE49 926 aaPredicted RBP18.4■□□□□ 0.54
RPA3-201ENST00000223129 MXD3Q9BW11 206 aa18.4■□□□□ 0.54
RPA3-201ENST00000223129 KDM2BQ8NHM5 1336 aa18.39■□□□□ 0.54
RPA3-201ENST00000223129 USP17L3A6NCW0 530 aa18.39■□□□□ 0.53
RPA3-201ENST00000223129 USP17L4A6NCW7 530 aa18.39■□□□□ 0.53
RPA3-201ENST00000223129 CHAF1AQ13111 956 aaPredicted RBP18.39■□□□□ 0.53
RPA3-201ENST00000223129 TTC39AQ5SRH9 613 aa18.39■□□□□ 0.53
RPA3-201ENST00000223129 USP17L1Q7RTZ2 530 aa18.39■□□□□ 0.53
RPA3-201ENST00000223129 CHD1LQ86WJ1 897 aa18.39■□□□□ 0.53
RPA3-201ENST00000223129 GNL3LQ9NVN8 582 aaKnown RBP18.39■□□□□ 0.53
RPA3-201ENST00000223129 SCARF1Q14162 830 aa18.39■□□□□ 0.53
RPA3-201ENST00000223129 ZBTB12Q9Y330 459 aaPredicted RBP18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms