RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 DDR1Q08345 913 aa23.71■■□□□ 1.39
TNFRSF1A-201ENST00000162749 COL23A1Q86Y22 540 aaPredicted RBP23.71■■□□□ 1.39
TNFRSF1A-201ENST00000162749 MINPP1Q9UNW1 487 aa23.71■■□□□ 1.39
TNFRSF1A-201ENST00000162749 POLRMTO00411 1230 aaKnown RBP23.69■■□□□ 1.38
TNFRSF1A-201ENST00000162749 SEC62Q99442 399 aaKnown RBP23.69■■□□□ 1.38
TNFRSF1A-201ENST00000162749 DOCK2Q92608 1830 aa23.68■■□□□ 1.38
TNFRSF1A-201ENST00000162749 MAP4K1Q92918 833 aa23.68■■□□□ 1.38
TNFRSF1A-201ENST00000162749 NRXN2Q9P2S2 1712 aa23.68■■□□□ 1.38
TNFRSF1A-201ENST00000162749 SLFNL1Q499Z3 407 aa23.68■■□□□ 1.38
TNFRSF1A-201ENST00000162749 ANKRD31Q8N7Z5 1873 aa23.68■■□□□ 1.38
TNFRSF1A-201ENST00000162749 UQCRFS1P1P0C7P4 283 aa23.67■■□□□ 1.38
TNFRSF1A-201ENST00000162749 ST5P78524 1137 aa23.67■■□□□ 1.38
TNFRSF1A-201ENST00000162749 MCMDC2Q4G0Z9 681 aa23.67■■□□□ 1.38
TNFRSF1A-201ENST00000162749 FLAD1Q8NFF5 587 aa23.67■■□□□ 1.38
TNFRSF1A-201ENST00000162749 PNPLA7Q6ZV29 1317 aa23.67■■□□□ 1.38
TNFRSF1A-201ENST00000162749 RASEFQ8IZ41 740 aa23.67■■□□□ 1.38
TNFRSF1A-201ENST00000162749 K7ELQ4 463 aaPredicted RBP23.66■■□□□ 1.38
TNFRSF1A-201ENST00000162749 CYP2E1P05181 493 aaPredicted RBP23.66■■□□□ 1.38
TNFRSF1A-201ENST00000162749 ZMYM1Q5SVZ6 1142 aa23.66■■□□□ 1.38
TNFRSF1A-201ENST00000162749 SNX14Q9Y5W7 946 aa23.66■■□□□ 1.38
TNFRSF1A-201ENST00000162749 MYH13Q9UKX3 1938 aa23.66■■□□□ 1.38
TNFRSF1A-201ENST00000162749 WTIPA6NIX2 430 aaPredicted RBP23.65■■□□□ 1.38
TNFRSF1A-201ENST00000162749 RNF113AO15541 343 aaKnown RBP23.65■■□□□ 1.38
TNFRSF1A-201ENST00000162749 ST18O60284 1047 aa23.65■■□□□ 1.38
TNFRSF1A-201ENST00000162749 EN1Q05925 392 aaPredicted RBP23.65■■□□□ 1.38
TNFRSF1A-201ENST00000162749 UBE4AQ14139 1066 aa23.65■■□□□ 1.38
TNFRSF1A-201ENST00000162749 NECTIN1Q15223 517 aa23.65■■□□□ 1.38
TNFRSF1A-201ENST00000162749 EZH2Q15910 746 aaKnown RBP23.65■■□□□ 1.38
TNFRSF1A-201ENST00000162749 CRY2Q49AN0 593 aa23.65■■□□□ 1.38
TNFRSF1A-201ENST00000162749 CCDC129Q6ZRS4 1044 aa23.65■■□□□ 1.38
TNFRSF1A-201ENST00000162749 NLGN1Q8N2Q7 840 aa23.65■■□□□ 1.38
TNFRSF1A-201ENST00000162749 CAMKK2Q96RR4 588 aa23.65■■□□□ 1.38
TNFRSF1A-201ENST00000162749 BCAMP50895 628 aa23.65■■□□□ 1.38
TNFRSF1A-201ENST00000162749 RASGRF1Q13972 1273 aa23.65■■□□□ 1.38
TNFRSF1A-201ENST00000162749 HELLSQ9NRZ9 838 aa23.65■■□□□ 1.38
TNFRSF1A-201ENST00000162749 HMG20BQ9P0W2 317 aa23.65■■□□□ 1.38
TNFRSF1A-201ENST00000162749 RBM8AQ9Y5S9 174 aaKnown RBP23.65■■□□□ 1.38
TNFRSF1A-201ENST00000162749 SPRYD3Q8NCJ5 442 aa23.64■■□□□ 1.38
TNFRSF1A-201ENST00000162749 NEK4P51957 841 aa23.64■■□□□ 1.37
TNFRSF1A-201ENST00000162749 PRPF40BQ6NWY9 871 aaKnown RBP23.64■■□□□ 1.37
TNFRSF1A-201ENST00000162749 GRAPQ13588 217 aa23.63■■□□□ 1.37
TNFRSF1A-201ENST00000162749 LRRFIP1Q32MZ4 808 aaKnown RBP23.63■■□□□ 1.37
TNFRSF1A-201ENST00000162749 SPATA5Q8NB90 893 aa23.63■■□□□ 1.37
TNFRSF1A-201ENST00000162749 GRAPLQ8TC17 118 aaPredicted RBP23.63■■□□□ 1.37
TNFRSF1A-201ENST00000162749 QSER1Q2KHR3 1735 aa23.63■■□□□ 1.37
TNFRSF1A-201ENST00000162749 ZFYP08048 801 aaPredicted RBP23.63■■□□□ 1.37
TNFRSF1A-201ENST00000162749 TTF1Q15361 905 aaPredicted RBP23.63■■□□□ 1.37
TNFRSF1A-201ENST00000162749 KCNB2Q92953 911 aa23.63■■□□□ 1.37
TNFRSF1A-201ENST00000162749 ANO8Q9HCE9 1232 aaPredicted RBP23.63■■□□□ 1.37
TNFRSF1A-201ENST00000162749 MAST3O60307 1309 aa23.62■■□□□ 1.37
TNFRSF1A-201ENST00000162749 KCNJ4P48050 445 aa23.62■■□□□ 1.37
TNFRSF1A-201ENST00000162749 ZNF804BA4D1E1 1349 aa23.62■■□□□ 1.37
TNFRSF1A-201ENST00000162749 RPGRQ92834 1020 aaKnown RBP23.61■■□□□ 1.37
TNFRSF1A-201ENST00000162749 UPF3BQ9BZI7 483 aaKnown RBP23.61■■□□□ 1.37
TNFRSF1A-201ENST00000162749 ANKRD2Q9GZV1 360 aa23.61■■□□□ 1.37
TNFRSF1A-201ENST00000162749 CREB3L3Q68CJ9 461 aa23.61■■□□□ 1.37
TNFRSF1A-201ENST00000162749 PIH1D3Q9NQM4 214 aaKnown RBP23.61■■□□□ 1.37
TNFRSF1A-201ENST00000162749 GOLGB1Q14789 3259 aaKnown RBP23.61■■□□□ 1.37
TNFRSF1A-201ENST00000162749 GSE1Q14687 1217 aa23.6■■□□□ 1.37
TNFRSF1A-201ENST00000162749 OSBP2Q969R2 916 aa23.6■■□□□ 1.37
TNFRSF1A-201ENST00000162749 GYG1P46976 350 aa23.6■■□□□ 1.37
TNFRSF1A-201ENST00000162749 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.6■■□□□ 1.37
TNFRSF1A-201ENST00000162749 KLRG2A4D1S0 409 aaPredicted RBP23.59■■□□□ 1.37
TNFRSF1A-201ENST00000162749 M0R2C6 588 aa23.59■■□□□ 1.37
TNFRSF1A-201ENST00000162749 SLC15A2Q16348 729 aa23.59■■□□□ 1.37
TNFRSF1A-201ENST00000162749 SLC27A2O14975 620 aa23.58■■□□□ 1.37
TNFRSF1A-201ENST00000162749 IDH1O75874 414 aaKnown RBP23.58■■□□□ 1.37
TNFRSF1A-201ENST00000162749 ZKSCAN1P17029 563 aaPredicted RBP23.58■■□□□ 1.37
TNFRSF1A-201ENST00000162749 VPS53Q5VIR6 699 aa23.58■■□□□ 1.37
TNFRSF1A-201ENST00000162749 SLC51AQ86UW1 340 aa23.58■■□□□ 1.37
TNFRSF1A-201ENST00000162749 APPBP2Q92624 585 aa23.58■■□□□ 1.37
TNFRSF1A-201ENST00000162749 KLRK1P26718 216 aa23.57■■□□□ 1.36
TNFRSF1A-201ENST00000162749 ADD2P35612 726 aa23.57■■□□□ 1.36
TNFRSF1A-201ENST00000162749 WASHC4Q2M389 1173 aa23.57■■□□□ 1.36
TNFRSF1A-201ENST00000162749 ADCK5Q3MIX3 580 aa23.57■■□□□ 1.36
TNFRSF1A-201ENST00000162749 FAM84BQ96KN1 310 aaPredicted RBP23.57■■□□□ 1.36
TNFRSF1A-201ENST00000162749 MMP10P09238 476 aa23.57■■□□□ 1.36
TNFRSF1A-201ENST00000162749 CAVIN4Q5BKX8 364 aa23.57■■□□□ 1.36
TNFRSF1A-201ENST00000162749 SLC9C2Q5TAH2 1124 aa23.57■■□□□ 1.36
TNFRSF1A-201ENST00000162749 HOXA10P31260 410 aaPredicted RBP23.56■■□□□ 1.36
TNFRSF1A-201ENST00000162749 RNF20Q5VTR2 975 aa23.56■■□□□ 1.36
TNFRSF1A-201ENST00000162749 ZSCAN25Q6NSZ9 544 aa23.56■■□□□ 1.36
TNFRSF1A-201ENST00000162749 PUS7LQ9H0K6 701 aaKnown RBP23.56■■□□□ 1.36
TNFRSF1A-201ENST00000162749 IQSEC3Q9UPP2 1182 aaPredicted RBP23.56■■□□□ 1.36
TNFRSF1A-201ENST00000162749 COL1A1P02452 1464 aaPredicted RBP23.56■■□□□ 1.36
TNFRSF1A-201ENST00000162749 RBM17Q96I25 401 aaKnown RBP23.56■■□□□ 1.36
TNFRSF1A-201ENST00000162749 DSCC1Q9BVC3 393 aa23.56■■□□□ 1.36
TNFRSF1A-201ENST00000162749 COL11A2P13942 1736 aaPredicted RBP23.55■■□□□ 1.36
TNFRSF1A-201ENST00000162749 HSPD1P10809 573 aaKnown RBP23.55■■□□□ 1.36
TNFRSF1A-201ENST00000162749 CASTP20810 708 aaKnown RBP23.55■■□□□ 1.36
TNFRSF1A-201ENST00000162749 MSL1Q68DK7 614 aa23.55■■□□□ 1.36
TNFRSF1A-201ENST00000162749 IL27Q8NEV9 243 aa23.55■■□□□ 1.36
TNFRSF1A-201ENST00000162749 GNL3LQ9NVN8 582 aaKnown RBP23.55■■□□□ 1.36
TNFRSF1A-201ENST00000162749 WWC3Q9ULE0 1092 aa23.55■■□□□ 1.36
TNFRSF1A-201ENST00000162749 U3KPZ7 1027 aaPredicted RBP23.55■■□□□ 1.36
TNFRSF1A-201ENST00000162749 LRRC37AA6NMS7 1700 aa23.55■■□□□ 1.36
TNFRSF1A-201ENST00000162749 LAMA4Q16363 1823 aa23.55■■□□□ 1.36
TNFRSF1A-201ENST00000162749 UBE3CQ15386 1083 aa23.55■■□□□ 1.36
TNFRSF1A-201ENST00000162749 VPS37DQ86XT2 251 aa23.55■■□□□ 1.36
TNFRSF1A-201ENST00000162749 BRIP1Q9BX63 1249 aa23.55■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms