RNA–Protein interactions for RNA: ENST00000075430.11

CTDP1-201, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CTDP1, Length 3,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-201ENST00000075430 CCZ1P86791 482 aaPredicted RBP19.5■□□□□ 0.71
CTDP1-201ENST00000075430 AKAP4Q5JQC9 854 aa19.5■□□□□ 0.71
CTDP1-201ENST00000075430 KAZALD1Q96I82 304 aa19.5■□□□□ 0.71
CTDP1-201ENST00000075430 TECPR2O15040 1411 aa19.49■□□□□ 0.71
CTDP1-201ENST00000075430 DHX40Q8IX18 779 aaKnown RBP19.49■□□□□ 0.71
CTDP1-201ENST00000075430 ELP1O95163 1332 aa19.49■□□□□ 0.71
CTDP1-201ENST00000075430 NAT10Q9H0A0 1025 aaKnown RBP19.48■□□□□ 0.71
CTDP1-201ENST00000075430 CPLX3Q8WVH0 158 aa19.48■□□□□ 0.71
CTDP1-201ENST00000075430 ZNF594Q96JF6 807 aaPredicted RBP19.48■□□□□ 0.71
CTDP1-201ENST00000075430 AIFM3Q96NN9 605 aa19.48■□□□□ 0.71
CTDP1-201ENST00000075430 SLC3A2P08195 630 aaKnown RBP19.48■□□□□ 0.71
CTDP1-201ENST00000075430 CLCN6P51797 869 aa19.47■□□□□ 0.71
CTDP1-201ENST00000075430 ERO1AQ96HE7 468 aa19.47■□□□□ 0.71
CTDP1-201ENST00000075430 NSUN7Q8NE18 718 aaKnown RBP19.47■□□□□ 0.71
CTDP1-201ENST00000075430 ZNF396Q96N95 335 aaPredicted RBP19.47■□□□□ 0.71
CTDP1-201ENST00000075430 A0A087WZG4 1122 aa19.47■□□□□ 0.71
CTDP1-201ENST00000075430 APPP05067 770 aa19.47■□□□□ 0.71
CTDP1-201ENST00000075430 FAM160A1Q05DH4 1040 aa19.47■□□□□ 0.71
CTDP1-201ENST00000075430 KARSQ15046 597 aaKnown RBP19.47■□□□□ 0.71
CTDP1-201ENST00000075430 E4F1Q66K89 784 aaPredicted RBP19.47■□□□□ 0.71
CTDP1-201ENST00000075430 PPP1R13BQ96KQ4 1090 aa19.47■□□□□ 0.71
CTDP1-201ENST00000075430 CCDC66A2RUB6 948 aa19.46■□□□□ 0.71
CTDP1-201ENST00000075430 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.46■□□□□ 0.71
CTDP1-201ENST00000075430 CERS3Q8IU89 383 aa19.46■□□□□ 0.71
CTDP1-201ENST00000075430 MRPS27Q92552 414 aaKnown RBP19.46■□□□□ 0.71
CTDP1-201ENST00000075430 ZNF446Q9NWS9 450 aa19.46■□□□□ 0.71
CTDP1-201ENST00000075430 ATF3P18847 181 aa19.46■□□□□ 0.71
CTDP1-201ENST00000075430 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.46■□□□□ 0.71
CTDP1-201ENST00000075430 GIGYF1O75420 1035 aaPredicted RBP19.46■□□□□ 0.71
CTDP1-201ENST00000075430 GTF2E1P29083 439 aaPredicted RBP19.46■□□□□ 0.71
CTDP1-201ENST00000075430 ARMCX5Q6P1M9 558 aa19.46■□□□□ 0.71
CTDP1-201ENST00000075430 TMCO3Q6UWJ1 677 aa19.46■□□□□ 0.71
CTDP1-201ENST00000075430 LINS1Q8NG48 757 aa19.46■□□□□ 0.71
CTDP1-201ENST00000075430 C8orf76Q96K31 380 aa19.46■□□□□ 0.71
CTDP1-201ENST00000075430 CHMP4CQ96CF2 233 aa19.45■□□□□ 0.7
CTDP1-201ENST00000075430 TNNT3P45378 269 aaPredicted RBP19.45■□□□□ 0.7
CTDP1-201ENST00000075430 MCMDC2Q4G0Z9 681 aa19.45■□□□□ 0.7
CTDP1-201ENST00000075430 LMBR1LQ6UX01 489 aa19.45■□□□□ 0.7
CTDP1-201ENST00000075430 TIGD1Q96MW7 591 aa19.45■□□□□ 0.7
CTDP1-201ENST00000075430 ZSCAN16Q9H4T2 348 aaPredicted RBP19.45■□□□□ 0.7
CTDP1-201ENST00000075430 MORC2Q9Y6X9 1032 aaPredicted RBP19.45■□□□□ 0.7
CTDP1-201ENST00000075430 NRXN3Q9Y4C0 1643 aa19.45■□□□□ 0.7
CTDP1-201ENST00000075430 IGKV5-2P06315 115 aa19.45■□□□□ 0.7
CTDP1-201ENST00000075430 TATP17735 454 aaPredicted RBP19.45■□□□□ 0.7
CTDP1-201ENST00000075430 TOMM22Q9NS69 142 aa19.45■□□□□ 0.7
CTDP1-201ENST00000075430 RNF216Q9NWF9 866 aaPredicted RBP19.45■□□□□ 0.7
CTDP1-201ENST00000075430 ORC3Q9UBD5 711 aaPredicted RBP19.45■□□□□ 0.7
CTDP1-201ENST00000075430 KDRP35968 1356 aa19.44■□□□□ 0.7
CTDP1-201ENST00000075430 GABPB1Q06547 395 aaPredicted RBP19.44■□□□□ 0.7
CTDP1-201ENST00000075430 KRT32Q14532 448 aa19.44■□□□□ 0.7
CTDP1-201ENST00000075430 AMOTQ4VCS5 1084 aa19.44■□□□□ 0.7
CTDP1-201ENST00000075430 DESI2Q9BSY9 194 aa19.44■□□□□ 0.7
CTDP1-201ENST00000075430 CTDNEP1O95476 244 aa19.44■□□□□ 0.7
CTDP1-201ENST00000075430 GNG11P61952 73 aa19.44■□□□□ 0.7
CTDP1-201ENST00000075430 TPM4P67936 248 aa19.44■□□□□ 0.7
CTDP1-201ENST00000075430 DPF2Q92785 391 aa19.44■□□□□ 0.7
CTDP1-201ENST00000075430 MRFAP1L1Q96HT8 127 aa19.44■□□□□ 0.7
CTDP1-201ENST00000075430 UBASH3AP57075 661 aa19.43■□□□□ 0.7
CTDP1-201ENST00000075430 TRIM34Q9BYJ4 488 aa19.43■□□□□ 0.7
CTDP1-201ENST00000075430 GOLGA8BA8MQT2 603 aa19.43■□□□□ 0.7
CTDP1-201ENST00000075430 IRX5P78411 483 aaPredicted RBP19.43■□□□□ 0.7
CTDP1-201ENST00000075430 TNNI3KQ59H18 835 aa19.43■□□□□ 0.7
CTDP1-201ENST00000075430 FPGT-TNNI3KV9GXZ4 949 aa19.43■□□□□ 0.7
CTDP1-201ENST00000075430 TMEM232C9JQI7 657 aa19.43■□□□□ 0.7
CTDP1-201ENST00000075430 HNRNPH2P55795 449 aaKnown RBP19.43■□□□□ 0.7
CTDP1-201ENST00000075430 BMS1Q14692 1282 aaKnown RBP19.43■□□□□ 0.7
CTDP1-201ENST00000075430 ZNF827Q17R98 1081 aa19.43■□□□□ 0.7
CTDP1-201ENST00000075430 DHX32Q7L7V1 743 aaKnown RBP19.43■□□□□ 0.7
CTDP1-201ENST00000075430 CLIC6Q96NY7 704 aa19.43■□□□□ 0.7
CTDP1-201ENST00000075430 ITSN1Q15811 1721 aa19.43■□□□□ 0.7
CTDP1-201ENST00000075430 KLF18A0A0U1RQI7 1052 aa19.42■□□□□ 0.7
CTDP1-201ENST00000075430 PHACTR2O75167 634 aa19.42■□□□□ 0.7
CTDP1-201ENST00000075430 U3KPZ7 1027 aaPredicted RBP19.42■□□□□ 0.7
CTDP1-201ENST00000075430 COBLO75128 1261 aa19.42■□□□□ 0.7
CTDP1-201ENST00000075430 ADKP55263 362 aaKnown RBP19.42■□□□□ 0.7
CTDP1-201ENST00000075430 PNOCQ13519 176 aa19.42■□□□□ 0.7
CTDP1-201ENST00000075430 NBPF11Q86T75 865 aa19.42■□□□□ 0.7
CTDP1-201ENST00000075430 MYL10Q9BUA6 226 aa19.42■□□□□ 0.7
CTDP1-201ENST00000075430 TMEM51Q9NW97 253 aa19.42■□□□□ 0.7
CTDP1-201ENST00000075430 HMG20BQ9P0W2 317 aa19.42■□□□□ 0.7
CTDP1-201ENST00000075430 COL15A1P39059 1388 aa19.41■□□□□ 0.7
CTDP1-201ENST00000075430 FANCCQ00597 558 aa19.41■□□□□ 0.7
CTDP1-201ENST00000075430 KLHL10Q6JEL2 608 aa19.41■□□□□ 0.7
CTDP1-201ENST00000075430 NYAP1Q6ZVC0 841 aa19.41■□□□□ 0.7
CTDP1-201ENST00000075430 TRMT44Q8IYL2 757 aaKnown RBP19.41■□□□□ 0.7
CTDP1-201ENST00000075430 STRN4Q9NRL3 753 aa19.41■□□□□ 0.7
CTDP1-201ENST00000075430 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.41■□□□□ 0.7
CTDP1-201ENST00000075430 ANKRD65E5RJM6 399 aa19.41■□□□□ 0.7
CTDP1-201ENST00000075430 ZNF202O95125 648 aa19.41■□□□□ 0.7
CTDP1-201ENST00000075430 SPTLC2O15270 562 aa19.41■□□□□ 0.7
CTDP1-201ENST00000075430 EPB41L2O43491 1005 aaKnown RBP19.41■□□□□ 0.7
CTDP1-201ENST00000075430 ST5P78524 1137 aa19.41■□□□□ 0.7
CTDP1-201ENST00000075430 MCM6Q14566 821 aa19.41■□□□□ 0.7
CTDP1-201ENST00000075430 KIAA1468Q9P260 1216 aa19.41■□□□□ 0.7
CTDP1-201ENST00000075430 RCOR1Q9UKL0 485 aa19.41■□□□□ 0.7
CTDP1-201ENST00000075430 EVCP57679 992 aa19.4■□□□□ 0.7
CTDP1-201ENST00000075430 CABP4P57796 275 aa19.4■□□□□ 0.7
CTDP1-201ENST00000075430 ZNF496Q96IT1 587 aaPredicted RBP19.4■□□□□ 0.7
CTDP1-201ENST00000075430 IRX2Q9BZI1 471 aaPredicted RBP19.4■□□□□ 0.7
CTDP1-201ENST00000075430 PUF60Q9UHX1 559 aaKnown RBP19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms