RNA–Protein interactions for RNA: ENSMUST00000223160.1

Trim9-211, Transcript of E3 ubiquitin-protein ligase TRIM9, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Trim9, Length 3,574 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9-211ENSMUST00000223160 Cnpy2Q9QXT0 182 aa11.85□□□□□ -0.51
Trim9-211ENSMUST00000223160 Tbc1d8Q9Z1A9 1134 aa11.85□□□□□ -0.51
Trim9-211ENSMUST00000223160 Krt85Q9Z2T6 507 aa11.85□□□□□ -0.51
Trim9-211ENSMUST00000223160 Spata31d1bE9QA57 1361 aa11.85□□□□□ -0.51
Trim9-211ENSMUST00000223160 Pdia4P08003 638 aaKnown RBP11.84□□□□□ -0.51
Trim9-211ENSMUST00000223160 Usp28Q5I043 1051 aa11.84□□□□□ -0.51
Trim9-211ENSMUST00000223160 Fsd2Q8BZ52 692 aa11.84□□□□□ -0.51
Trim9-211ENSMUST00000223160 Mmel1Q9JLI3 765 aa11.84□□□□□ -0.51
Trim9-211ENSMUST00000223160 Ddx60E9PZQ1 1711 aa11.84□□□□□ -0.51
Trim9-211ENSMUST00000223160 Erbb4Q61527 1308 aa11.84□□□□□ -0.51
Trim9-211ENSMUST00000223160 Pet2A2AHY8 747 aa11.84□□□□□ -0.51
Trim9-211ENSMUST00000223160 Brpf3B2KF05 1204 aaKnown RBP11.84□□□□□ -0.51
Trim9-211ENSMUST00000223160 Zbtb38Q3LR78 1197 aa11.84□□□□□ -0.51
Trim9-211ENSMUST00000223160 ZyxQ62523 564 aa11.84□□□□□ -0.51
Trim9-211ENSMUST00000223160 Isy1Q69ZQ2 285 aaKnown RBP11.84□□□□□ -0.51
Trim9-211ENSMUST00000223160 U2af1l4Q8BGJ9 220 aa11.84□□□□□ -0.51
Trim9-211ENSMUST00000223160 Col18a1P39061 1774 aa11.84□□□□□ -0.51
Trim9-211ENSMUST00000223160 Krt24A1L317 512 aa11.84□□□□□ -0.51
Trim9-211ENSMUST00000223160 Limch1Q3UH68 1057 aa11.84□□□□□ -0.51
Trim9-211ENSMUST00000223160 Scaf1Q5U4C3 1256 aaKnown RBP11.84□□□□□ -0.51
Trim9-211ENSMUST00000223160 Rbm19Q8R3C6 952 aaKnown RBP11.84□□□□□ -0.51
Trim9-211ENSMUST00000223160 Hmg20bQ9Z104 317 aa11.84□□□□□ -0.51
Trim9-211ENSMUST00000223160 Gzf1Q4VBD9 706 aa11.83□□□□□ -0.52
Trim9-211ENSMUST00000223160 Esco1Q69Z69 843 aa11.83□□□□□ -0.52
Trim9-211ENSMUST00000223160 Tmem266Q8BZB3 538 aa11.83□□□□□ -0.52
Trim9-211ENSMUST00000223160 Ufl1Q8CCJ3 793 aaKnown RBP11.83□□□□□ -0.52
Trim9-211ENSMUST00000223160 Ces1dQ8VCT4 565 aa11.83□□□□□ -0.52
Trim9-211ENSMUST00000223160 Lonrf3Q9D4H7 753 aa11.83□□□□□ -0.52
Trim9-211ENSMUST00000223160 Cyp3a57D3YYZ0 503 aa11.83□□□□□ -0.52
Trim9-211ENSMUST00000223160 Lipo1J3QME6 396 aa11.83□□□□□ -0.52
Trim9-211ENSMUST00000223160 CebpzP53569 1052 aaKnown RBP11.83□□□□□ -0.52
Trim9-211ENSMUST00000223160 IntuQ059U7 942 aa11.83□□□□□ -0.52
Trim9-211ENSMUST00000223160 Acnat2Q8BGG9 420 aa11.83□□□□□ -0.52
Trim9-211ENSMUST00000223160 Sec62Q8BU14 398 aaKnown RBP11.83□□□□□ -0.52
Trim9-211ENSMUST00000223160 Pdcl3Q8BVF2 240 aa11.83□□□□□ -0.52
Trim9-211ENSMUST00000223160 SdsQ8VBT2 327 aa11.83□□□□□ -0.52
Trim9-211ENSMUST00000223160 Hps3Q91VB4 1002 aa11.83□□□□□ -0.52
Trim9-211ENSMUST00000223160 Usp42B2RQC2 1324 aaKnown RBP11.83□□□□□ -0.52
Trim9-211ENSMUST00000223160 Gli3Q61602 1583 aa11.83□□□□□ -0.52
Trim9-211ENSMUST00000223160 Pde4bB1AWC9 736 aa11.83□□□□□ -0.52
Trim9-211ENSMUST00000223160 Tom1O88746 492 aa11.83□□□□□ -0.52
Trim9-211ENSMUST00000223160 Usp25P57080 1055 aa11.83□□□□□ -0.52
Trim9-211ENSMUST00000223160 Cplx1P63040 134 aa11.83□□□□□ -0.52
Trim9-211ENSMUST00000223160 Pknox2Q8BG99 474 aa11.83□□□□□ -0.52
Trim9-211ENSMUST00000223160 Cep55Q8BT07 462 aa11.83□□□□□ -0.52
Trim9-211ENSMUST00000223160 Rufy2Q8R4C2 606 aa11.83□□□□□ -0.52
Trim9-211ENSMUST00000223160 Tmem143Q8VD26 458 aa11.83□□□□□ -0.52
Trim9-211ENSMUST00000223160 Nrbp1Q99J45 535 aa11.83□□□□□ -0.52
Trim9-211ENSMUST00000223160 Sos2Q02384 1333 aa11.82□□□□□ -0.52
Trim9-211ENSMUST00000223160 Lins1Q3U1D0 764 aa11.82□□□□□ -0.52
Trim9-211ENSMUST00000223160 Fam102bQ8BQS4 339 aa11.82□□□□□ -0.52
Trim9-211ENSMUST00000223160 Slx1bQ8BX32 270 aa11.82□□□□□ -0.52
Trim9-211ENSMUST00000223160 Crb1Q8VHS2 1405 aa11.82□□□□□ -0.52
Trim9-211ENSMUST00000223160 Med4Q9CQA5 270 aa11.82□□□□□ -0.52
Trim9-211ENSMUST00000223160 Mybbp1aQ7TPV4 1344 aaKnown RBP11.82□□□□□ -0.52
Trim9-211ENSMUST00000223160 SfswapQ3USH5 945 aaKnown RBP11.82□□□□□ -0.52
Trim9-211ENSMUST00000223160 Rrp12Q6P5B0 1295 aaKnown RBP11.82□□□□□ -0.52
Trim9-211ENSMUST00000223160 Plcd1Q8R3B1 756 aa11.82□□□□□ -0.52
Trim9-211ENSMUST00000223160 Terf2ipQ91VL8 393 aa11.82□□□□□ -0.52
Trim9-211ENSMUST00000223160 Igbp1bQ9QZ29 343 aa11.82□□□□□ -0.52
Trim9-211ENSMUST00000223160 CltaO08585 235 aa11.82□□□□□ -0.52
Trim9-211ENSMUST00000223160 Glipr1l2Q9CQ35 332 aa11.82□□□□□ -0.52
Trim9-211ENSMUST00000223160 Tyro3P55144 880 aa11.81□□□□□ -0.52
Trim9-211ENSMUST00000223160 Ano6Q6P9J9 911 aa11.81□□□□□ -0.52
Trim9-211ENSMUST00000223160 Ehd2Q8BH64 543 aa11.81□□□□□ -0.52
Trim9-211ENSMUST00000223160 Bmp2kQ91Z96 1138 aa11.81□□□□□ -0.52
Trim9-211ENSMUST00000223160 Rdm1Q9CQK3 281 aa11.81□□□□□ -0.52
Trim9-211ENSMUST00000223160 Gtf2f1Q3THK3 508 aaKnown RBP11.81□□□□□ -0.52
Trim9-211ENSMUST00000223160 Llgl2Q3TJ91 1027 aa11.81□□□□□ -0.52
Trim9-211ENSMUST00000223160 Pold4Q9CWP8 107 aa11.81□□□□□ -0.52
Trim9-211ENSMUST00000223160 Mrpl44Q9CY73 333 aaKnown RBP11.81□□□□□ -0.52
Trim9-211ENSMUST00000223160 Akap11E9Q777 1895 aa11.81□□□□□ -0.52
Trim9-211ENSMUST00000223160 Ltbp4Q8K4G1 1666 aa11.81□□□□□ -0.52
Trim9-211ENSMUST00000223160 Pde8bE9Q4S1 865 aa11.8□□□□□ -0.52
Trim9-211ENSMUST00000223160 Morc2aQ69ZX6 1030 aa11.8□□□□□ -0.52
Trim9-211ENSMUST00000223160 Ankrd23Q812A3 306 aa11.8□□□□□ -0.52
Trim9-211ENSMUST00000223160 Hook1Q8BIL5 728 aa11.8□□□□□ -0.52
Trim9-211ENSMUST00000223160 Srp68Q8BMA6 625 aaKnown RBP11.8□□□□□ -0.52
Trim9-211ENSMUST00000223160 9230110C19RikQ8CC70 267 aa11.8□□□□□ -0.52
Trim9-211ENSMUST00000223160 Wdr64Q9D565 1086 aa11.8□□□□□ -0.52
Trim9-211ENSMUST00000223160 Zeb2Q9R0G7 1215 aa11.8□□□□□ -0.52
Trim9-211ENSMUST00000223160 Myl3P09542 204 aa11.8□□□□□ -0.52
Trim9-211ENSMUST00000223160 Fam83bQ0VBM2 1012 aa11.8□□□□□ -0.52
Trim9-211ENSMUST00000223160 Otop3Q80UF9 577 aa11.8□□□□□ -0.52
Trim9-211ENSMUST00000223160 Srgap1Q91Z69 1062 aa11.8□□□□□ -0.52
Trim9-211ENSMUST00000223160 Eaf2Q91ZD6 262 aa11.8□□□□□ -0.52
Trim9-211ENSMUST00000223160 Dbndd1Q9CZ00 160 aa11.8□□□□□ -0.52
Trim9-211ENSMUST00000223160 Clic4Q9QYB1 253 aa11.8□□□□□ -0.52
Trim9-211ENSMUST00000223160 Lmtk3Q5XJV6 1424 aa11.8□□□□□ -0.52
Trim9-211ENSMUST00000223160 Znf496Q5SXI5 585 aa11.8□□□□□ -0.52
Trim9-211ENSMUST00000223160 Frmd3Q8BHD4 595 aa11.8□□□□□ -0.52
Trim9-211ENSMUST00000223160 Ehd4Q9EQP2 541 aa11.8□□□□□ -0.52
Trim9-211ENSMUST00000223160 Ush1cQ9ES64 910 aa11.8□□□□□ -0.52
Trim9-211ENSMUST00000223160 Prss40A6H6T1 365 aa11.79□□□□□ -0.52
Trim9-211ENSMUST00000223160 Pcdhb9E9Q5G2 828 aa11.79□□□□□ -0.52
Trim9-211ENSMUST00000223160 1700113H08RikE9Q9Q5 327 aa11.79□□□□□ -0.52
Trim9-211ENSMUST00000223160 Tlr8P58682 1032 aa11.79□□□□□ -0.52
Trim9-211ENSMUST00000223160 Tmem59lQ7TNI2 337 aa11.79□□□□□ -0.52
Trim9-211ENSMUST00000223160 Slc51aQ8R000 340 aa11.79□□□□□ -0.52
Trim9-211ENSMUST00000223160 BcorQ8CGN4 1759 aa11.79□□□□□ -0.52
Retrieved 100 of 22,080 RNA–protein pairs in 69.5 ms