RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 Togaram2Q3TYG6 1002 aa10.72□□□□□ -0.69
Upf3b-201ENSMUST00000076265 Tax1bp1Q3UKC1 814 aaKnown RBP10.72□□□□□ -0.69
Upf3b-201ENSMUST00000076265 Atf3Q60765 181 aa10.72□□□□□ -0.69
Upf3b-201ENSMUST00000076265 HellsQ60848 821 aa10.72□□□□□ -0.69
Upf3b-201ENSMUST00000076265 ReltQ8BX43 436 aa10.72□□□□□ -0.69
Upf3b-201ENSMUST00000076265 Tcof1O08784 1320 aaKnown RBP10.72□□□□□ -0.69
Upf3b-201ENSMUST00000076265 Hdgfl1Q2VPR5 283 aa10.72□□□□□ -0.69
Upf3b-201ENSMUST00000076265 Klf4Q60793 483 aa10.72□□□□□ -0.69
Upf3b-201ENSMUST00000076265 Cfap161Q6P8Y0 303 aa10.72□□□□□ -0.69
Upf3b-201ENSMUST00000076265 NfrkbQ6PIJ4 1296 aaKnown RBP10.72□□□□□ -0.69
Upf3b-201ENSMUST00000076265 Fbxl5Q8C2S5 690 aa10.72□□□□□ -0.69
Upf3b-201ENSMUST00000076265 Smc1bQ920F6 1248 aa10.72□□□□□ -0.69
Upf3b-201ENSMUST00000076265 NkapQ9D0F4 415 aaKnown RBP10.72□□□□□ -0.69
Upf3b-201ENSMUST00000076265 Lgr5Q9Z1P4 907 aa10.72□□□□□ -0.69
Upf3b-201ENSMUST00000076265 Cdc45Q9Z1X9 566 aa10.72□□□□□ -0.69
Upf3b-201ENSMUST00000076265 Xrn1P97789 1719 aaKnown RBP10.71□□□□□ -0.69
Upf3b-201ENSMUST00000076265 Trpm2Q91YD4 1506 aa10.71□□□□□ -0.69
Upf3b-201ENSMUST00000076265 Tbkbp1A2A9T0 611 aa10.71□□□□□ -0.69
Upf3b-201ENSMUST00000076265 Gm11758A2BEI6 360 aa10.71□□□□□ -0.69
Upf3b-201ENSMUST00000076265 Gm11757A2BEI8 360 aa10.71□□□□□ -0.69
Upf3b-201ENSMUST00000076265 Gm11239E9Q5Z9 360 aa10.71□□□□□ -0.69
Upf3b-201ENSMUST00000076265 Gm11237F2Z3W5 360 aa10.71□□□□□ -0.69
Upf3b-201ENSMUST00000076265 Gm11238F2Z478 360 aa10.71□□□□□ -0.69
Upf3b-201ENSMUST00000076265 Gm11236J3QMS7 360 aa10.71□□□□□ -0.69
Upf3b-201ENSMUST00000076265 Adam19O35674 920 aa10.71□□□□□ -0.69
Upf3b-201ENSMUST00000076265 Parp2O88554 559 aa10.71□□□□□ -0.69
Upf3b-201ENSMUST00000076265 Sbk3P0C5K0 361 aa10.71□□□□□ -0.69
Upf3b-201ENSMUST00000076265 FechP22315 420 aaKnown RBP10.71□□□□□ -0.69
Upf3b-201ENSMUST00000076265 Gm428Q3UTE2 360 aa10.71□□□□□ -0.69
Upf3b-201ENSMUST00000076265 Znf507Q6ZPY5 941 aa10.71□□□□□ -0.69
Upf3b-201ENSMUST00000076265 Ubp1Q811S7 540 aa10.71□□□□□ -0.69
Upf3b-201ENSMUST00000076265 FlcnQ8QZS3 579 aa10.71□□□□□ -0.69
Upf3b-201ENSMUST00000076265 Chic2Q9D9G3 165 aa10.71□□□□□ -0.69
Upf3b-201ENSMUST00000076265 Hoxd10P28359 340 aa10.7□□□□□ -0.7
Upf3b-201ENSMUST00000076265 Myo1bP46735 1107 aa10.7□□□□□ -0.7
Upf3b-201ENSMUST00000076265 Q3UUX7 111 aa10.7□□□□□ -0.7
Upf3b-201ENSMUST00000076265 Slc4a10Q5DTL9 1118 aa10.7□□□□□ -0.7
Upf3b-201ENSMUST00000076265 Prdm1Q60636 856 aa10.7□□□□□ -0.7
Upf3b-201ENSMUST00000076265 Taf1cQ6PDZ2 836 aa10.7□□□□□ -0.7
Upf3b-201ENSMUST00000076265 Wdr45bQ9CR39 344 aa10.7□□□□□ -0.7
Upf3b-201ENSMUST00000076265 Rsph9Q9D9V4 276 aa10.7□□□□□ -0.7
Upf3b-201ENSMUST00000076265 Morc1Q9WVL5 950 aa10.7□□□□□ -0.7
Upf3b-201ENSMUST00000076265 Spag9Q58A65 1321 aaKnown RBP10.7□□□□□ -0.7
Upf3b-201ENSMUST00000076265 Dnajc25A2ALW5 357 aa10.7□□□□□ -0.7
Upf3b-201ENSMUST00000076265 Tcp10cE9Q046 482 aa10.7□□□□□ -0.7
Upf3b-201ENSMUST00000076265 Traf5P70191 558 aa10.7□□□□□ -0.7
Upf3b-201ENSMUST00000076265 Atf4Q06507 349 aa10.7□□□□□ -0.7
Upf3b-201ENSMUST00000076265 Gm1587Q3UT80 123 aa10.7□□□□□ -0.7
Upf3b-201ENSMUST00000076265 Fam177a1Q8BR63 207 aa10.7□□□□□ -0.7
Upf3b-201ENSMUST00000076265 Ppm1mQ8BU27 406 aa10.7□□□□□ -0.7
Upf3b-201ENSMUST00000076265 Fmn2Q9JL04 1578 aa10.7□□□□□ -0.7
Upf3b-201ENSMUST00000076265 5830473C10RikF8VQ07 620 aa10.69□□□□□ -0.7
Upf3b-201ENSMUST00000076265 Nrsn1P97799 196 aa10.69□□□□□ -0.7
Upf3b-201ENSMUST00000076265 Maats1Q8BRC6 783 aa10.69□□□□□ -0.7
Upf3b-201ENSMUST00000076265 Prr33Q8C494 260 aa10.69□□□□□ -0.7
Upf3b-201ENSMUST00000076265 Vps52Q8C754 723 aaKnown RBP10.69□□□□□ -0.7
Upf3b-201ENSMUST00000076265 TkfcQ8VC30 578 aa10.69□□□□□ -0.7
Upf3b-201ENSMUST00000076265 Hic1Q9R1Y5 733 aa10.69□□□□□ -0.7
Upf3b-201ENSMUST00000076265 Dip2bQ3UH60 1574 aa10.69□□□□□ -0.7
Upf3b-201ENSMUST00000076265 Mroh5E9PUJ8 762 aa10.69□□□□□ -0.7
Upf3b-201ENSMUST00000076265 Pola2P33611 600 aa10.69□□□□□ -0.7
Upf3b-201ENSMUST00000076265 Sycp3P70281 254 aa10.69□□□□□ -0.7
Upf3b-201ENSMUST00000076265 Cobll1Q3UMF0 1273 aa10.69□□□□□ -0.7
Upf3b-201ENSMUST00000076265 Jakmip3Q5DTN8 844 aa10.69□□□□□ -0.7
Upf3b-201ENSMUST00000076265 Arhgef38Q80VK6 770 aa10.69□□□□□ -0.7
Upf3b-201ENSMUST00000076265 IqubQ8CDK3 788 aa10.69□□□□□ -0.7
Upf3b-201ENSMUST00000076265 CenpqQ9CPQ5 267 aa10.69□□□□□ -0.7
Upf3b-201ENSMUST00000076265 Naip5Q9R016 1403 aa10.69□□□□□ -0.7
Upf3b-201ENSMUST00000076265 Nat3P50296 290 aa10.68□□□□□ -0.7
Upf3b-201ENSMUST00000076265 Kctd2Q8CEZ0 266 aa10.68□□□□□ -0.7
Upf3b-201ENSMUST00000076265 Odf2lQ9D478 642 aa10.68□□□□□ -0.7
Upf3b-201ENSMUST00000076265 Rsc1a1Q9ER99 582 aa10.68□□□□□ -0.7
Upf3b-201ENSMUST00000076265 Nfe2l3Q9WTM4 660 aa10.68□□□□□ -0.7
Upf3b-201ENSMUST00000076265 Mapk8ip1Q9WVI9 707 aa10.68□□□□□ -0.7
Upf3b-201ENSMUST00000076265 Adgrl2Q8JZZ7 1487 aa10.68□□□□□ -0.7
Upf3b-201ENSMUST00000076265 Pla2g4bP0C871 782 aa10.68□□□□□ -0.7
Upf3b-201ENSMUST00000076265 Mns1Q61884 491 aa10.68□□□□□ -0.7
Upf3b-201ENSMUST00000076265 Kcnv1Q8BZN2 503 aa10.68□□□□□ -0.7
Upf3b-201ENSMUST00000076265 Bbox1Q924Y0 387 aa10.68□□□□□ -0.7
Upf3b-201ENSMUST00000076265 Adgrb2Q8CGM1 1561 aa10.68□□□□□ -0.7
Upf3b-201ENSMUST00000076265 CltcQ68FD5 1675 aaKnown RBP10.67□□□□□ -0.7
Upf3b-201ENSMUST00000076265 Uggt2E9Q4X2 1504 aa10.67□□□□□ -0.7
Upf3b-201ENSMUST00000076265 Tpm3P21107 285 aaKnown RBP10.67□□□□□ -0.7
Upf3b-201ENSMUST00000076265 OsbpQ3B7Z2 805 aa10.67□□□□□ -0.7
Upf3b-201ENSMUST00000076265 Mea1Q64327 174 aa10.67□□□□□ -0.7
Upf3b-201ENSMUST00000076265 Chtf18Q8BIW9 969 aa10.67□□□□□ -0.7
Upf3b-201ENSMUST00000076265 Rbm5Q91YE7 815 aaKnown RBP10.67□□□□□ -0.7
Upf3b-201ENSMUST00000076265 Ranbp17Q99NF8 1088 aa10.67□□□□□ -0.7
Upf3b-201ENSMUST00000076265 Desi2Q9D291 194 aa10.67□□□□□ -0.7
Upf3b-201ENSMUST00000076265 Arhgef7Q9ES28 862 aa10.67□□□□□ -0.7
Upf3b-201ENSMUST00000076265 Topbp1Q6ZQF0 1515 aa10.67□□□□□ -0.7
Upf3b-201ENSMUST00000076265 Knl1Q66JQ7 1612 aa10.67□□□□□ -0.7
Upf3b-201ENSMUST00000076265 Kif4P33174 1231 aa10.67□□□□□ -0.7
Upf3b-201ENSMUST00000076265 Adamts18Q4VC17 1219 aa10.67□□□□□ -0.7
Upf3b-201ENSMUST00000076265 Rasa3Q60790 834 aa10.67□□□□□ -0.7
Upf3b-201ENSMUST00000076265 Nlrp9cQ66X01 1004 aa10.67□□□□□ -0.7
Upf3b-201ENSMUST00000076265 Anks6Q6GQX6 883 aa10.67□□□□□ -0.7
Upf3b-201ENSMUST00000076265 Utf1Q6J1H4 339 aa10.67□□□□□ -0.7
Upf3b-201ENSMUST00000076265 Soga3Q6NZL0 945 aa10.67□□□□□ -0.7
Upf3b-201ENSMUST00000076265 Cand2Q6ZQ73 1235 aa10.67□□□□□ -0.7
Retrieved 100 of 22,080 RNA–protein pairs in 68 ms