RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 RPL12P30050 165 aaKnown RBP12.25□□□□□ -0.45
SCARB2-227ENST00000640957 ARRB1P49407 418 aaPredicted RBP12.25□□□□□ -0.45
SCARB2-227ENST00000640957 SPEM2Q0P670 501 aa12.25□□□□□ -0.45
SCARB2-227ENST00000640957 HAGHQ16775 308 aa12.25□□□□□ -0.45
SCARB2-227ENST00000640957 TGIF2LXQ8IUE1 241 aa12.25□□□□□ -0.45
SCARB2-227ENST00000640957 ZNF321PQ8N8H1 164 aa12.25□□□□□ -0.45
SCARB2-227ENST00000640957 FAM213BQ8TBF2 198 aa12.25□□□□□ -0.45
SCARB2-227ENST00000640957 ZDHHC12Q96GR4 267 aa12.25□□□□□ -0.45
SCARB2-227ENST00000640957 GAR1Q9NY12 217 aaKnown RBP12.25□□□□□ -0.45
SCARB2-227ENST00000640957 PISDQ9UG56 409 aa12.25□□□□□ -0.45
SCARB2-227ENST00000640957 YBX2Q9Y2T7 364 aaKnown RBP12.25□□□□□ -0.45
SCARB2-227ENST00000640957 BTBD17A6NE02 478 aa12.24□□□□□ -0.45
SCARB2-227ENST00000640957 TGFBR3LH3BV60 316 aa12.24□□□□□ -0.45
SCARB2-227ENST00000640957 K7EPK0 472 aa12.24□□□□□ -0.45
SCARB2-227ENST00000640957 MFNGO00587 321 aa12.24□□□□□ -0.45
SCARB2-227ENST00000640957 SOD3P08294 240 aa12.24□□□□□ -0.45
SCARB2-227ENST00000640957 EMP2P54851 167 aa12.24□□□□□ -0.45
SCARB2-227ENST00000640957 PRSS12P56730 875 aa12.24□□□□□ -0.45
SCARB2-227ENST00000640957 PRPS1P60891 318 aa12.24□□□□□ -0.45
SCARB2-227ENST00000640957 ZNF260Q3ZCT1 412 aa12.24□□□□□ -0.45
SCARB2-227ENST00000640957 BTNL8Q6UX41 500 aa12.24□□□□□ -0.45
SCARB2-227ENST00000640957 FAM71E2Q8N5Q1 922 aa12.24□□□□□ -0.45
SCARB2-227ENST00000640957 SMIM8Q96KF7 97 aa12.24□□□□□ -0.45
SCARB2-227ENST00000640957 GAL3ST4Q96RP7 486 aa12.24□□□□□ -0.45
SCARB2-227ENST00000640957 TEX101Q9BY14 249 aa12.24□□□□□ -0.45
SCARB2-227ENST00000640957 ELL3Q9HB65 397 aaPredicted RBP12.24□□□□□ -0.45
SCARB2-227ENST00000640957 WASF3Q9UPY6 502 aa12.24□□□□□ -0.45
SCARB2-227ENST00000640957 TIMM10BQ9Y5J6 103 aa12.24□□□□□ -0.45
SCARB2-227ENST00000640957 TMEM269A0A1B0GVZ9 245 aa12.24□□□□□ -0.45
SCARB2-227ENST00000640957 CXCL1P09341 107 aa12.24□□□□□ -0.45
SCARB2-227ENST00000640957 S1PR1P21453 382 aa12.24□□□□□ -0.45
SCARB2-227ENST00000640957 OR9K2Q8NGE7 335 aa12.24□□□□□ -0.45
SCARB2-227ENST00000640957 SERINC2Q96SA4 455 aa12.24□□□□□ -0.45
SCARB2-227ENST00000640957 TCEAL7Q9BRU2 100 aa12.24□□□□□ -0.45
SCARB2-227ENST00000640957 MMP25Q9NPA2 562 aa12.24□□□□□ -0.45
SCARB2-227ENST00000640957 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.24□□□□□ -0.45
SCARB2-227ENST00000640957 TREM2Q9NZC2 230 aa12.24□□□□□ -0.45
SCARB2-227ENST00000640957 GDE1Q9NZC3 331 aa12.24□□□□□ -0.45
SCARB2-227ENST00000640957 ARHGAP21Q5T5U3 1957 aa12.24□□□□□ -0.45
SCARB2-227ENST00000640957 TRGC2P03986 189 aa12.24□□□□□ -0.45
SCARB2-227ENST00000640957 CSTBP04080 98 aaKnown RBP12.24□□□□□ -0.45
SCARB2-227ENST00000640957 VSIG8P0DPA2 414 aa12.24□□□□□ -0.45
SCARB2-227ENST00000640957 BCKDHBP21953 392 aa12.24□□□□□ -0.45
SCARB2-227ENST00000640957 NOVA1P51513 510 aaKnown RBP12.24□□□□□ -0.45
SCARB2-227ENST00000640957 SUPT4H1P63272 117 aaKnown RBP12.24□□□□□ -0.45
SCARB2-227ENST00000640957 CCL20P78556 96 aa12.24□□□□□ -0.45
SCARB2-227ENST00000640957 NSUN5P2Q63ZY6 315 aa12.24□□□□□ -0.45
SCARB2-227ENST00000640957 EDAQ92838 391 aa12.24□□□□□ -0.45
SCARB2-227ENST00000640957 OR8B4Q96RC9 309 aa12.24□□□□□ -0.45
SCARB2-227ENST00000640957 ADOQ96SZ5 270 aa12.24□□□□□ -0.45
SCARB2-227ENST00000640957 CRISPLD2Q9H0B8 497 aa12.24□□□□□ -0.45
SCARB2-227ENST00000640957 NELFAQ9H3P2 528 aa12.24□□□□□ -0.45
SCARB2-227ENST00000640957 GFOD1Q9NXC2 390 aa12.24□□□□□ -0.45
SCARB2-227ENST00000640957 SERINC4A6NH21 518 aa12.23□□□□□ -0.45
SCARB2-227ENST00000640957 H0YL77 283 aa12.23□□□□□ -0.45
SCARB2-227ENST00000640957 CYB5BO43169 146 aa12.23□□□□□ -0.45
SCARB2-227ENST00000640957 ZNF217O75362 1048 aa12.23□□□□□ -0.45
SCARB2-227ENST00000640957 RPS23P62266 143 aaKnown RBP12.23□□□□□ -0.45
SCARB2-227ENST00000640957 ALG11Q2TAA5 492 aa12.23□□□□□ -0.45
SCARB2-227ENST00000640957 PRSS54Q6PEW0 395 aa12.23□□□□□ -0.45
SCARB2-227ENST00000640957 TMEM182Q6ZP80 229 aaPredicted RBP12.23□□□□□ -0.45
SCARB2-227ENST00000640957 DCXRQ7Z4W1 244 aa12.23□□□□□ -0.45
SCARB2-227ENST00000640957 CPEB2Q7Z5Q1 589 aaKnown RBP12.23□□□□□ -0.45
SCARB2-227ENST00000640957 SLC26A10Q8NG04 563 aa12.23□□□□□ -0.45
SCARB2-227ENST00000640957 GTF3AQ92664 365 aaKnown RBP12.23□□□□□ -0.45
SCARB2-227ENST00000640957 NKX2-4Q9H2Z4 354 aa12.23□□□□□ -0.45
SCARB2-227ENST00000640957 FLVCR1Q9Y5Y0 555 aa12.23□□□□□ -0.45
SCARB2-227ENST00000640957 SHANK1Q9Y566 2161 aa12.23□□□□□ -0.45
SCARB2-227ENST00000640957 FAM157AC9JC47 383 aa12.23□□□□□ -0.45
SCARB2-227ENST00000640957 HCRTR2O43614 444 aa12.23□□□□□ -0.45
SCARB2-227ENST00000640957 ADH1BP00325 375 aa12.23□□□□□ -0.45
SCARB2-227ENST00000640957 HKR1P10072 659 aa12.23□□□□□ -0.45
SCARB2-227ENST00000640957 IL11P20809 199 aa12.23□□□□□ -0.45
SCARB2-227ENST00000640957 ZNF10P21506 573 aaPredicted RBP12.23□□□□□ -0.45
SCARB2-227ENST00000640957 ANOS1P23352 680 aa12.23□□□□□ -0.45
SCARB2-227ENST00000640957 OR3A2P47893 321 aa12.23□□□□□ -0.45
SCARB2-227ENST00000640957 GABRA4P48169 554 aa12.23□□□□□ -0.45
SCARB2-227ENST00000640957 DHPSP49366 369 aaPredicted RBP12.23□□□□□ -0.45
SCARB2-227ENST00000640957 FOXL2P58012 376 aa12.23□□□□□ -0.45
SCARB2-227ENST00000640957 RAP1AP62834 184 aa12.23□□□□□ -0.45
SCARB2-227ENST00000640957 ACKR1Q16570 336 aa12.23□□□□□ -0.45
SCARB2-227ENST00000640957 ZNF239Q16600 458 aaKnown RBP12.23□□□□□ -0.45
SCARB2-227ENST00000640957 GAB4Q2WGN9 574 aa12.23□□□□□ -0.45
SCARB2-227ENST00000640957 RPS4Y2Q8TD47 263 aa12.23□□□□□ -0.45
SCARB2-227ENST00000640957 ZNF775Q96BV0 537 aaPredicted RBP12.23□□□□□ -0.45
SCARB2-227ENST00000640957 ADAT3Q96EY9 351 aaPredicted RBP12.23□□□□□ -0.45
SCARB2-227ENST00000640957 PRDM13Q9H4Q3 707 aa12.23□□□□□ -0.45
SCARB2-227ENST00000640957 ZNF701Q9NV72 531 aaPredicted RBP12.23□□□□□ -0.45
SCARB2-227ENST00000640957 PILRAQ9UKJ1 303 aa12.23□□□□□ -0.45
SCARB2-227ENST00000640957 RAB22AQ9UL26 194 aa12.23□□□□□ -0.45
SCARB2-227ENST00000640957 KIAA1549LQ6ZVL6 1849 aa12.23□□□□□ -0.45
SCARB2-227ENST00000640957 RAD51DO75771 328 aa12.22□□□□□ -0.45
SCARB2-227ENST00000640957 IFNA17P01571 189 aa12.22□□□□□ -0.45
SCARB2-227ENST00000640957 RAB5CP51148 216 aa12.22□□□□□ -0.45
SCARB2-227ENST00000640957 HNF4GQ14541 408 aa12.22□□□□□ -0.45
SCARB2-227ENST00000640957 TMEM196Q5HYL7 178 aa12.22□□□□□ -0.45
SCARB2-227ENST00000640957 LINC00114Q6XXX2 140 aa12.22□□□□□ -0.45
SCARB2-227ENST00000640957 MED25Q71SY5 747 aa12.22□□□□□ -0.45
SCARB2-227ENST00000640957 TERB2Q8NHR7 220 aa12.22□□□□□ -0.45
SCARB2-227ENST00000640957 C16orf52Q8NHV5 167 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms