RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 STOMP27105 288 aa6.6□□□□□ -1.35
CLK1-215ENST00000621181 RFX2P48378 723 aa6.6□□□□□ -1.35
CLK1-215ENST00000621181 MMP15P51511 669 aa6.6□□□□□ -1.35
CLK1-215ENST00000621181 ZNF79Q15937 498 aa6.6□□□□□ -1.35
CLK1-215ENST00000621181 NRN1LQ496H8 165 aa6.6□□□□□ -1.35
CLK1-215ENST00000621181 ZMAT1Q5H9K5 638 aa6.6□□□□□ -1.35
CLK1-215ENST00000621181 PABPC1L2AQ5JQF8 200 aa6.6□□□□□ -1.35
CLK1-215ENST00000621181 THEM4Q5T1C6 240 aa6.6□□□□□ -1.35
CLK1-215ENST00000621181 SPATC1Q76KD6 591 aa6.6□□□□□ -1.35
CLK1-215ENST00000621181 HIST3H2AQ7L7L0 130 aa6.6□□□□□ -1.35
CLK1-215ENST00000621181 LINC00471Q8N535 108 aa6.6□□□□□ -1.35
CLK1-215ENST00000621181 SPICQ8N5J4 248 aa6.6□□□□□ -1.35
CLK1-215ENST00000621181 IQCF1Q8N6M8 205 aa6.6□□□□□ -1.35
CLK1-215ENST00000621181 CELF2-AS1Q8N7Q2 184 aa6.6□□□□□ -1.35
CLK1-215ENST00000621181 SYT14Q8NB59 555 aa6.6□□□□□ -1.35
CLK1-215ENST00000621181 OR6T1Q8NGN1 323 aa6.6□□□□□ -1.35
CLK1-215ENST00000621181 VANGL1Q8TAA9 524 aaPredicted RBP6.6□□□□□ -1.35
CLK1-215ENST00000621181 KLF14Q8TD94 323 aaPredicted RBP6.6□□□□□ -1.35
CLK1-215ENST00000621181 HIST1H2ACQ93077 130 aa6.6□□□□□ -1.35
CLK1-215ENST00000621181 PRRC1Q96M27 445 aa6.6□□□□□ -1.35
CLK1-215ENST00000621181 ZNF582Q96NG8 517 aaPredicted RBP6.6□□□□□ -1.35
CLK1-215ENST00000621181 DCLRE1CQ96SD1 692 aaKnown RBP6.6□□□□□ -1.35
CLK1-215ENST00000621181 DIRC2Q96SL1 478 aa6.6□□□□□ -1.35
CLK1-215ENST00000621181 SLC30A2Q9BRI3 323 aa6.6□□□□□ -1.35
CLK1-215ENST00000621181 MND1Q9BWT6 205 aa6.6□□□□□ -1.35
CLK1-215ENST00000621181 SLC19A3Q9BZV2 496 aa6.6□□□□□ -1.35
CLK1-215ENST00000621181 NUAK2Q9H093 628 aa6.6□□□□□ -1.35
CLK1-215ENST00000621181 ISYNA1Q9NPH2 558 aa6.6□□□□□ -1.35
CLK1-215ENST00000621181 CYSLTR2Q9NS75 346 aa6.6□□□□□ -1.35
CLK1-215ENST00000621181 TAS2R5Q9NYW4 299 aa6.6□□□□□ -1.35
CLK1-215ENST00000621181 ZDHHC8Q9ULC8 765 aa6.6□□□□□ -1.35
CLK1-215ENST00000621181 STUB1Q9UNE7 303 aa6.6□□□□□ -1.35
CLK1-215ENST00000621181 NPTNQ9Y639 398 aa6.6□□□□□ -1.35
CLK1-215ENST00000621181 C5orf49A4QMS7 147 aa6.6□□□□□ -1.35
CLK1-215ENST00000621181 ZSCAN5BA6NJL1 495 aa6.6□□□□□ -1.35
CLK1-215ENST00000621181 CLDN34H7C241 214 aa6.6□□□□□ -1.35
CLK1-215ENST00000621181 CHP2O43745 196 aa6.6□□□□□ -1.35
CLK1-215ENST00000621181 MDKP21741 143 aaPredicted RBP6.6□□□□□ -1.35
CLK1-215ENST00000621181 OMGP23515 440 aa6.6□□□□□ -1.35
CLK1-215ENST00000621181 SOX6P35712 828 aa6.6□□□□□ -1.35
CLK1-215ENST00000621181 MPV17P39210 176 aa6.6□□□□□ -1.35
CLK1-215ENST00000621181 MTNR1AP48039 350 aa6.6□□□□□ -1.35
CLK1-215ENST00000621181 ETV1P50549 477 aa6.6□□□□□ -1.35
CLK1-215ENST00000621181 IFITM2Q01629 132 aa6.6□□□□□ -1.35
CLK1-215ENST00000621181 GPR50Q13585 617 aa6.6□□□□□ -1.35
CLK1-215ENST00000621181 KRR1Q13601 381 aaKnown RBP6.6□□□□□ -1.35
CLK1-215ENST00000621181 TPBGQ13641 420 aa6.6□□□□□ -1.35
CLK1-215ENST00000621181 GINS1Q14691 196 aa6.6□□□□□ -1.35
CLK1-215ENST00000621181 SLC9A3R2Q15599 337 aa6.6□□□□□ -1.35
CLK1-215ENST00000621181 ZNF74Q16587 644 aa6.6□□□□□ -1.35
CLK1-215ENST00000621181 KLF17Q5JT82 389 aaPredicted RBP6.6□□□□□ -1.35
CLK1-215ENST00000621181 SPANXN2Q5MJ10 180 aa6.6□□□□□ -1.35
CLK1-215ENST00000621181 MBNL2Q5VZF2 373 aaKnown RBP6.6□□□□□ -1.35
CLK1-215ENST00000621181 ZNF613Q6PF04 617 aa6.6□□□□□ -1.35
CLK1-215ENST00000621181 OR52E2Q8NGJ4 325 aa6.6□□□□□ -1.35
CLK1-215ENST00000621181 SETD6Q8TBK2 473 aa6.6□□□□□ -1.35
CLK1-215ENST00000621181 MCHR2Q969V1 340 aa6.6□□□□□ -1.35
CLK1-215ENST00000621181 SLC25A46Q96AG3 418 aa6.6□□□□□ -1.35
CLK1-215ENST00000621181 MARS2Q96GW9 593 aaKnown RBP6.6□□□□□ -1.35
CLK1-215ENST00000621181 ZNF48Q96MX3 618 aaPredicted RBP6.6□□□□□ -1.35
CLK1-215ENST00000621181 MCHR1Q99705 422 aa6.6□□□□□ -1.35
CLK1-215ENST00000621181 ARHGDIGQ99819 225 aa6.6□□□□□ -1.35
CLK1-215ENST00000621181 SOSTQ9BQB4 213 aa6.6□□□□□ -1.35
CLK1-215ENST00000621181 ZNF649Q9BS31 505 aa6.6□□□□□ -1.35
CLK1-215ENST00000621181 OR2J1Q9GZK6 312 aa6.6□□□□□ -1.35
CLK1-215ENST00000621181 SRRQ9GZT4 340 aa6.6□□□□□ -1.35
CLK1-215ENST00000621181 MIXL1Q9H2W2 232 aa6.6□□□□□ -1.35
CLK1-215ENST00000621181 MSL2Q9HCI7 577 aa6.6□□□□□ -1.35
CLK1-215ENST00000621181 CGGBP1Q9UFW8 167 aaPredicted RBP6.6□□□□□ -1.35
CLK1-215ENST00000621181 TANC2Q9HCD6 1990 aa6.59□□□□□ -1.35
CLK1-215ENST00000621181 A0A087WUU8 490 aa6.59□□□□□ -1.35
CLK1-215ENST00000621181 A0A1W2PRG6 482 aa6.59□□□□□ -1.35
CLK1-215ENST00000621181 CPSF4LA6NMK7 179 aaKnown RBP6.59□□□□□ -1.35
CLK1-215ENST00000621181 BLOC1S5-TXNDC5H3BN57 136 aa6.59□□□□□ -1.35
CLK1-215ENST00000621181 TRAPPC2LH3BP13 241 aa6.59□□□□□ -1.35
CLK1-215ENST00000621181 GPANK1O95872 356 aa6.59□□□□□ -1.35
CLK1-215ENST00000621181 KNG1P01042 644 aa6.59□□□□□ -1.35
CLK1-215ENST00000621181 IL1AP01583 271 aa6.59□□□□□ -1.35
CLK1-215ENST00000621181 IGHV2-70P01814 119 aa6.59□□□□□ -1.35
CLK1-215ENST00000621181 MMP7P09237 267 aaPredicted RBP6.59□□□□□ -1.35
CLK1-215ENST00000621181 TGM4P49221 684 aa6.59□□□□□ -1.35
CLK1-215ENST00000621181 GDI2P50395 445 aaKnown RBP6.59□□□□□ -1.35
CLK1-215ENST00000621181 SEC61A1P61619 476 aaKnown RBP6.59□□□□□ -1.35
CLK1-215ENST00000621181 TNFAIP6P98066 277 aaPredicted RBP6.59□□□□□ -1.35
CLK1-215ENST00000621181 ESCO2Q56NI9 601 aa6.59□□□□□ -1.35
CLK1-215ENST00000621181 OXLD1Q5BKU9 147 aa6.59□□□□□ -1.35
CLK1-215ENST00000621181 TMEM255AQ5JRV8 349 aa6.59□□□□□ -1.35
CLK1-215ENST00000621181 ZNF362Q5T0B9 420 aaPredicted RBP6.59□□□□□ -1.35
CLK1-215ENST00000621181 CD200R1LQ6Q8B3 271 aa6.59□□□□□ -1.35
CLK1-215ENST00000621181 C17orf107Q6ZR85 190 aa6.59□□□□□ -1.35
CLK1-215ENST00000621181 NANOGNBQ7Z5D8 188 aa6.59□□□□□ -1.35
CLK1-215ENST00000621181 AKAP14Q86UN6 197 aa6.59□□□□□ -1.35
CLK1-215ENST00000621181 CLDN22Q8N7P3 220 aa6.59□□□□□ -1.35
CLK1-215ENST00000621181 NOXO1Q8NFA2 376 aa6.59□□□□□ -1.35
CLK1-215ENST00000621181 OR8D4Q8NGM9 314 aa6.59□□□□□ -1.35
CLK1-215ENST00000621181 ABHD4Q8TB40 342 aa6.59□□□□□ -1.35
CLK1-215ENST00000621181 SLC25A40Q8TBP6 338 aa6.59□□□□□ -1.35
CLK1-215ENST00000621181 EVA1AQ9H8M9 152 aa6.59□□□□□ -1.35
CLK1-215ENST00000621181 PATZ1Q9HBE1 687 aaKnown RBP6.59□□□□□ -1.35
CLK1-215ENST00000621181 TMEM106BQ9NUM4 274 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms