RNA–Protein interactions for RNA: ENST00000618262.4

SRRT-216, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-216ENST00000618262 JAGN1Q8N5M9 183 aa10.75□□□□□ -0.69
SRRT-216ENST00000618262 OR2T12Q8NG77 320 aa10.75□□□□□ -0.69
SRRT-216ENST00000618262 SLC35A4Q96G79 324 aa10.75□□□□□ -0.69
SRRT-216ENST00000618262 ZNF583Q96ND8 569 aa10.75□□□□□ -0.69
SRRT-216ENST00000618262 OR7D2Q96RA2 312 aa10.75□□□□□ -0.69
SRRT-216ENST00000618262 YLPM1P49750 1951 aaKnown RBP10.75□□□□□ -0.69
SRRT-216ENST00000618262 NBASA2RRP1 2371 aa10.75□□□□□ -0.69
SRRT-216ENST00000618262 IQCMA0A1B0GVH7 501 aa10.75□□□□□ -0.69
SRRT-216ENST00000618262 SEC14L6B5MCN3 397 aa10.75□□□□□ -0.69
SRRT-216ENST00000618262 HMGN4O00479 90 aa10.75□□□□□ -0.69
SRRT-216ENST00000618262 ACP2P11117 423 aa10.75□□□□□ -0.69
SRRT-216ENST00000618262 NFYAP23511 347 aaPredicted RBP10.75□□□□□ -0.69
SRRT-216ENST00000618262 SLC6A1P30531 599 aa10.75□□□□□ -0.69
SRRT-216ENST00000618262 Q0VFX4 171 aa10.75□□□□□ -0.69
SRRT-216ENST00000618262 ELAVL1Q15717 326 aaKnown RBP10.75□□□□□ -0.69
SRRT-216ENST00000618262 TMEM249Q2WGJ8 235 aa10.75□□□□□ -0.69
SRRT-216ENST00000618262 DEFB109BQ30KR1 87 aa10.75□□□□□ -0.69
SRRT-216ENST00000618262 DCST1Q5T197 706 aa10.75□□□□□ -0.69
SRRT-216ENST00000618262 C8orf82Q6P1X6 216 aaPredicted RBP10.75□□□□□ -0.69
SRRT-216ENST00000618262 LYG2Q86SG7 212 aa10.75□□□□□ -0.69
SRRT-216ENST00000618262 DTX1Q86Y01 620 aa10.75□□□□□ -0.69
SRRT-216ENST00000618262 APCDD1LQ8NCL9 501 aa10.75□□□□□ -0.69
SRRT-216ENST00000618262 ZNF721Q8TF20 911 aa10.75□□□□□ -0.69
SRRT-216ENST00000618262 ADOQ96SZ5 270 aa10.75□□□□□ -0.69
SRRT-216ENST00000618262 DDOQ99489 341 aa10.75□□□□□ -0.69
SRRT-216ENST00000618262 TBL1XR1Q9BZK7 514 aa10.75□□□□□ -0.69
SRRT-216ENST00000618262 ABCG5Q9H222 651 aa10.75□□□□□ -0.69
SRRT-216ENST00000618262 COPS7AQ9UBW8 275 aa10.75□□□□□ -0.69
SRRT-216ENST00000618262 ORC6Q9Y5N6 252 aa10.75□□□□□ -0.69
SRRT-216ENST00000618262 IGLV3-12A0A075B6K2 115 aa10.74□□□□□ -0.69
SRRT-216ENST00000618262 G3V3Q6 166 aa10.74□□□□□ -0.69
SRRT-216ENST00000618262 CCL25O15444 150 aa10.74□□□□□ -0.69
SRRT-216ENST00000618262 ZNF682O95780 498 aa10.74□□□□□ -0.69
SRRT-216ENST00000618262 ANXA2P07355 339 aaKnown RBP10.74□□□□□ -0.69
SRRT-216ENST00000618262 UBCP0CG48 685 aaKnown RBP10.74□□□□□ -0.69
SRRT-216ENST00000618262 COX6A1P12074 109 aa10.74□□□□□ -0.69
SRRT-216ENST00000618262 MMP11P24347 488 aa10.74□□□□□ -0.69
SRRT-216ENST00000618262 CCL11P51671 97 aa10.74□□□□□ -0.69
SRRT-216ENST00000618262 HCCSP53701 268 aa10.74□□□□□ -0.69
SRRT-216ENST00000618262 RBPJQ06330 500 aa10.74□□□□□ -0.69
SRRT-216ENST00000618262 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.74□□□□□ -0.69
SRRT-216ENST00000618262 MESTQ5EB52 335 aa10.74□□□□□ -0.69
SRRT-216ENST00000618262 ANKRD34AQ69YU3 496 aa10.74□□□□□ -0.69
SRRT-216ENST00000618262 UNQ9370/PRO34162Q6UXP9 181 aa10.74□□□□□ -0.69
SRRT-216ENST00000618262 MRPL52Q86TS9 123 aaKnown RBP10.74□□□□□ -0.69
SRRT-216ENST00000618262 COMMD1Q8N668 190 aa10.74□□□□□ -0.69
SRRT-216ENST00000618262 COX18Q8N8Q8 333 aa10.74□□□□□ -0.69
SRRT-216ENST00000618262 RHNO1Q9BSD3 238 aa10.74□□□□□ -0.69
SRRT-216ENST00000618262 PLEK2Q9NYT0 353 aa10.74□□□□□ -0.69
SRRT-216ENST00000618262 PLA2G3Q9NZ20 509 aa10.74□□□□□ -0.69
SRRT-216ENST00000618262 ZNF346Q9UL40 294 aaKnown RBP10.74□□□□□ -0.69
SRRT-216ENST00000618262 LIPCP11150 499 aa10.74□□□□□ -0.69
SRRT-216ENST00000618262 FRKP42685 505 aaPredicted RBP10.74□□□□□ -0.69
SRRT-216ENST00000618262 OR1E2P47887 323 aa10.74□□□□□ -0.69
SRRT-216ENST00000618262 PSG6Q00889 435 aa10.74□□□□□ -0.69
SRRT-216ENST00000618262 RAB31Q13636 194 aa10.74□□□□□ -0.69
SRRT-216ENST00000618262 MFSD12Q6NUT3 480 aa10.74□□□□□ -0.69
SRRT-216ENST00000618262 PGBD2Q6P3X8 592 aa10.74□□□□□ -0.69
SRRT-216ENST00000618262 GSG1LQ6UXU4 331 aa10.74□□□□□ -0.69
SRRT-216ENST00000618262 MRGPREQ86SM8 312 aa10.74□□□□□ -0.69
SRRT-216ENST00000618262 ATP6V1C2Q8NEY4 427 aa10.74□□□□□ -0.69
SRRT-216ENST00000618262 SLC38A5Q8WUX1 472 aa10.74□□□□□ -0.69
SRRT-216ENST00000618262 DAZLQ92904 295 aaKnown RBP10.74□□□□□ -0.69
SRRT-216ENST00000618262 FGF11Q92914 225 aa10.74□□□□□ -0.69
SRRT-216ENST00000618262 ORAI1Q96D31 301 aa10.74□□□□□ -0.69
SRRT-216ENST00000618262 FOXN4Q96NZ1 517 aa10.74□□□□□ -0.69
SRRT-216ENST00000618262 NPTNQ9Y639 398 aa10.74□□□□□ -0.69
SRRT-216ENST00000618262 NINQ8N4C6 2090 aa10.74□□□□□ -0.69
SRRT-216ENST00000618262 TRBV5-3A0A0A0MS03 114 aa10.74□□□□□ -0.69
SRRT-216ENST00000618262 IGHV1-45A0A0A0MS14 117 aa10.74□□□□□ -0.69
SRRT-216ENST00000618262 ZNF705EA8MWA4 302 aaPredicted RBP10.74□□□□□ -0.69
SRRT-216ENST00000618262 SCGB2A1O75556 95 aa10.74□□□□□ -0.69
SRRT-216ENST00000618262 PRSS23O95084 383 aa10.74□□□□□ -0.69
SRRT-216ENST00000618262 GSTM3P21266 225 aa10.74□□□□□ -0.69
SRRT-216ENST00000618262 HTR2AP28223 471 aa10.74□□□□□ -0.69
SRRT-216ENST00000618262 PCOLCEQ15113 449 aa10.74□□□□□ -0.69
SRRT-216ENST00000618262 HLA-DQA1Q5Y7H0 255 aa10.74□□□□□ -0.69
SRRT-216ENST00000618262 REEP3Q6NUK4 255 aa10.74□□□□□ -0.69
SRRT-216ENST00000618262 OR2L13Q8N349 312 aa10.74□□□□□ -0.69
SRRT-216ENST00000618262 ZNF664Q8N3J9 261 aa10.74□□□□□ -0.69
SRRT-216ENST00000618262 B3GNT7Q8NFL0 401 aa10.74□□□□□ -0.69
SRRT-216ENST00000618262 BRIX1Q8TDN6 353 aaKnown RBP10.74□□□□□ -0.69
SRRT-216ENST00000618262 ROPN1LQ96C74 230 aa10.74□□□□□ -0.69
SRRT-216ENST00000618262 TMEM19Q96HH6 336 aa10.74□□□□□ -0.69
SRRT-216ENST00000618262 FAAP24Q9BTP7 215 aa10.74□□□□□ -0.69
SRRT-216ENST00000618262 ASPNQ9BXN1 380 aa10.74□□□□□ -0.69
SRRT-216ENST00000618262 TLNRD1Q9H1K6 362 aa10.74□□□□□ -0.69
SRRT-216ENST00000618262 SVILO95425 2214 aa10.73□□□□□ -0.69
SRRT-216ENST00000618262 PCSK5Q92824 1860 aa10.73□□□□□ -0.69
SRRT-216ENST00000618262 TCRBV5S2A0A599 114 aa10.73□□□□□ -0.69
SRRT-216ENST00000618262 MCRIP1C9JLW8 97 aa10.73□□□□□ -0.69
SRRT-216ENST00000618262 ZNF587BE7ETH6 402 aa10.73□□□□□ -0.69
SRRT-216ENST00000618262 REM1O75628 298 aa10.73□□□□□ -0.69
SRRT-216ENST00000618262 DIRAS1O95057 198 aa10.73□□□□□ -0.69
SRRT-216ENST00000618262 F12P00748 615 aaPredicted RBP10.73□□□□□ -0.69
SRRT-216ENST00000618262 IGKV1D-16P01601 117 aa10.73□□□□□ -0.69
SRRT-216ENST00000618262 CLPSP04118 112 aa10.73□□□□□ -0.69
SRRT-216ENST00000618262 SHC1P29353 583 aa10.73□□□□□ -0.69
SRRT-216ENST00000618262 CD80P33681 288 aa10.73□□□□□ -0.69
SRRT-216ENST00000618262 AKR1C8PQ5T2L2 129 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms