RNA–Protein interactions for RNA: ENST00000611132.4

VPS36-207, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 1 (best) BASIC

Gene VPS36, Length 4,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-207ENST00000611132 RALGAPA2Q2PPJ7 1873 aa13.14□□□□□ -0.31
VPS36-207ENST00000611132 PLXNA1Q9UIW2 1896 aa13.14□□□□□ -0.31
VPS36-207ENST00000611132 CEBPZOSA8MTT3 80 aa13.14□□□□□ -0.31
VPS36-207ENST00000611132 MPTX1A8MV57 137 aa13.14□□□□□ -0.31
VPS36-207ENST00000611132 C4orf17Q53FE4 359 aa13.14□□□□□ -0.31
VPS36-207ENST00000611132 MR1Q95460 341 aa13.14□□□□□ -0.31
VPS36-207ENST00000611132 ISOC2Q96AB3 205 aa13.14□□□□□ -0.31
VPS36-207ENST00000611132 RSRP1Q9BUV0 290 aa13.14□□□□□ -0.31
VPS36-207ENST00000611132 EDEM2Q9BV94 578 aa13.14□□□□□ -0.31
VPS36-207ENST00000611132 TUBG2Q9NRH3 451 aa13.14□□□□□ -0.31
VPS36-207ENST00000611132 KCNIP1Q9NZI2 227 aa13.14□□□□□ -0.31
VPS36-207ENST00000611132 PPP5D1E7EU14 171 aa13.14□□□□□ -0.31
VPS36-207ENST00000611132 ABOP16442 354 aa13.14□□□□□ -0.31
VPS36-207ENST00000611132 BTCP35070 178 aa13.14□□□□□ -0.31
VPS36-207ENST00000611132 TMEM123Q8N131 208 aa13.14□□□□□ -0.31
VPS36-207ENST00000611132 CNTD2Q9H8S5 307 aa13.14□□□□□ -0.31
VPS36-207ENST00000611132 BCO1Q9HAY6 547 aa13.14□□□□□ -0.31
VPS36-207ENST00000611132 GNG13Q9P2W3 67 aa13.14□□□□□ -0.31
VPS36-207ENST00000611132 GHRLQ9UBU3 117 aa13.14□□□□□ -0.31
VPS36-207ENST00000611132 NYNRINQ9P2P1 1898 aaKnown RBP13.14□□□□□ -0.31
VPS36-207ENST00000611132 A0A1W2PPH5 198 aa13.13□□□□□ -0.31
VPS36-207ENST00000611132 TLCD2A6NGC4 264 aa13.13□□□□□ -0.31
VPS36-207ENST00000611132 SERPINE3A8MV23 424 aa13.13□□□□□ -0.31
VPS36-207ENST00000611132 PIN1P1O15428 100 aa13.13□□□□□ -0.31
VPS36-207ENST00000611132 GLRA1P23415 457 aa13.13□□□□□ -0.31
VPS36-207ENST00000611132 FASLGP48023 281 aa13.13□□□□□ -0.31
VPS36-207ENST00000611132 SLC35A1P78382 337 aa13.13□□□□□ -0.31
VPS36-207ENST00000611132 THEM4Q5T1C6 240 aa13.13□□□□□ -0.31
VPS36-207ENST00000611132 DPPA2Q7Z7J5 298 aa13.13□□□□□ -0.31
VPS36-207ENST00000611132 KCNMB2Q9Y691 235 aa13.13□□□□□ -0.31
VPS36-207ENST00000611132 A0A0G2JK05 382 aa13.13□□□□□ -0.31
VPS36-207ENST00000611132 CTHP32929 405 aa13.13□□□□□ -0.31
VPS36-207ENST00000611132 PTGFRP43088 359 aa13.13□□□□□ -0.31
VPS36-207ENST00000611132 TAS2R30P59541 319 aa13.13□□□□□ -0.31
VPS36-207ENST00000611132 RAB4BP61018 213 aa13.13□□□□□ -0.31
VPS36-207ENST00000611132 PSG6Q00889 435 aa13.13□□□□□ -0.31
VPS36-207ENST00000611132 IKZF1Q13422 519 aa13.13□□□□□ -0.31
VPS36-207ENST00000611132 DEGS2Q6QHC5 323 aa13.13□□□□□ -0.31
VPS36-207ENST00000611132 MS4A3Q96HJ5 214 aa13.13□□□□□ -0.31
VPS36-207ENST00000611132 ZNF638Q14966 1978 aaKnown RBP13.13□□□□□ -0.31
VPS36-207ENST00000611132 C7orf77A4D0Y5 90 aa13.13□□□□□ -0.31
VPS36-207ENST00000611132 GREM1O60565 184 aa13.13□□□□□ -0.31
VPS36-207ENST00000611132 RAC2P15153 192 aa13.13□□□□□ -0.31
VPS36-207ENST00000611132 HTR5AP47898 357 aa13.13□□□□□ -0.31
VPS36-207ENST00000611132 FAM53BQ14153 422 aa13.13□□□□□ -0.31
VPS36-207ENST00000611132 PLXDC2Q6UX71 529 aa13.13□□□□□ -0.31
VPS36-207ENST00000611132 TVP23CQ96ET8 276 aa13.13□□□□□ -0.31
VPS36-207ENST00000611132 CABLES2Q9BTV7 478 aa13.13□□□□□ -0.31
VPS36-207ENST00000611132 SAMD10Q9BYL1 202 aa13.13□□□□□ -0.31
VPS36-207ENST00000611132 OR2M5A3KFT3 312 aa13.12□□□□□ -0.31
VPS36-207ENST00000611132 PHOX2AO14813 284 aa13.12□□□□□ -0.31
VPS36-207ENST00000611132 HMGB3O15347 200 aaKnown RBP13.12□□□□□ -0.31
VPS36-207ENST00000611132 H3F3AP84243 136 aa13.12□□□□□ -0.31
VPS36-207ENST00000611132 SHEQ5VZ18 495 aa13.12□□□□□ -0.31
VPS36-207ENST00000611132 ANKRD33Q7Z3H0 272 aa13.12□□□□□ -0.31
VPS36-207ENST00000611132 NR2C2APQ86WQ0 139 aa13.12□□□□□ -0.31
VPS36-207ENST00000611132 OR52N4Q8NGI2 321 aa13.12□□□□□ -0.31
VPS36-207ENST00000611132 TSLPQ969D9 159 aa13.12□□□□□ -0.31
VPS36-207ENST00000611132 MFRPQ9BY79 579 aa13.12□□□□□ -0.31
VPS36-207ENST00000611132 SERGEFQ9UGK8 458 aa13.12□□□□□ -0.31
VPS36-207ENST00000611132 NPTNQ9Y639 398 aa13.12□□□□□ -0.31
VPS36-207ENST00000611132 PLRG1O43660 514 aaKnown RBP13.12□□□□□ -0.31
VPS36-207ENST00000611132 CTLA4P16410 223 aa13.12□□□□□ -0.31
VPS36-207ENST00000611132 AADACP22760 399 aa13.12□□□□□ -0.31
VPS36-207ENST00000611132 NAAAQ02083 359 aa13.12□□□□□ -0.31
VPS36-207ENST00000611132 ZNF684Q5T5D7 378 aa13.12□□□□□ -0.31
VPS36-207ENST00000611132 TMEM268Q5VZI3 342 aa13.12□□□□□ -0.31
VPS36-207ENST00000611132 CBLN3Q6UW01 205 aa13.12□□□□□ -0.31
VPS36-207ENST00000611132 UNQ9370/PRO34162Q6UXP9 181 aa13.12□□□□□ -0.31
VPS36-207ENST00000611132 TFAP2EQ6VUC0 442 aa13.12□□□□□ -0.31
VPS36-207ENST00000611132 OR51A2Q8NGJ7 313 aa13.12□□□□□ -0.31
VPS36-207ENST00000611132 ARHGAP5-AS1Q96IT6 56 aa13.12□□□□□ -0.31
VPS36-207ENST00000611132 NRIP2Q9BQI9 281 aa13.12□□□□□ -0.31
VPS36-207ENST00000611132 ALKBH4Q9NXW9 302 aa13.12□□□□□ -0.31
VPS36-207ENST00000611132 PLXNB2O15031 1838 aa13.12□□□□□ -0.31
VPS36-207ENST00000611132 BTBD17A6NE02 478 aa13.12□□□□□ -0.31
VPS36-207ENST00000611132 FRG2CA6NGY1 282 aa13.12□□□□□ -0.31
VPS36-207ENST00000611132 H7BYZ3 331 aa13.12□□□□□ -0.31
VPS36-207ENST00000611132 NFYBP25208 207 aa13.12□□□□□ -0.31
VPS36-207ENST00000611132 CALCRP30988 508 aa13.12□□□□□ -0.31
VPS36-207ENST00000611132 MESTQ5EB52 335 aa13.12□□□□□ -0.31
VPS36-207ENST00000611132 LDLRAD3Q86YD5 345 aa13.12□□□□□ -0.31
VPS36-207ENST00000611132 ZPLD1Q8TCW7 415 aa13.12□□□□□ -0.31
VPS36-207ENST00000611132 C11orf40Q8WZ69 217 aa13.12□□□□□ -0.31
VPS36-207ENST00000611132 BTF3L4Q96K17 158 aa13.12□□□□□ -0.31
VPS36-207ENST00000611132 hCG_1809904A0A1W2PP81 198 aa13.12□□□□□ -0.31
VPS36-207ENST00000611132 A0A1W2PR64 198 aa13.12□□□□□ -0.31
VPS36-207ENST00000611132 A0A1W2PRV1 198 aa13.12□□□□□ -0.31
VPS36-207ENST00000611132 SCAF4O95104 1147 aaKnown RBP13.12□□□□□ -0.31
VPS36-207ENST00000611132 NXPH3O95157 252 aa13.12□□□□□ -0.31
VPS36-207ENST00000611132 SYNGR4O95473 234 aa13.12□□□□□ -0.31
VPS36-207ENST00000611132 ARG1P05089 322 aa13.12□□□□□ -0.31
VPS36-207ENST00000611132 SERPINA7P05543 415 aa13.12□□□□□ -0.31
VPS36-207ENST00000611132 TESK1Q15569 626 aa13.12□□□□□ -0.31
VPS36-207ENST00000611132 ST8SIA1Q92185 356 aa13.12□□□□□ -0.31
VPS36-207ENST00000611132 HS3ST3A1Q9Y663 406 aa13.12□□□□□ -0.31
VPS36-207ENST00000611132 A6NLC8 198 aa13.11□□□□□ -0.31
VPS36-207ENST00000611132 TRAPPC2LH3BP13 241 aa13.11□□□□□ -0.31
VPS36-207ENST00000611132 MRPS21P82921 87 aaKnown RBP13.11□□□□□ -0.31
VPS36-207ENST00000611132 FAM109BQ6ICB4 259 aaPredicted RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms