RNA–Protein interactions for RNA: ENST00000606782.1

CTSA-213, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 582 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-213ENST00000606782 OTX1P32242 354 aaPredicted RBP11.27□□□□□ -0.61
CTSA-213ENST00000606782 ROM1Q03395 351 aa11.27□□□□□ -0.61
CTSA-213ENST00000606782 FAHD2BQ6P2I3 314 aaPredicted RBP11.27□□□□□ -0.61
CTSA-213ENST00000606782 DEGS2Q6QHC5 323 aa11.27□□□□□ -0.61
CTSA-213ENST00000606782 Q6ZR03 302 aa11.27□□□□□ -0.61
CTSA-213ENST00000606782 USP43Q70EL4 1123 aa11.27□□□□□ -0.61
CTSA-213ENST00000606782 EGFL6Q8IUX8 553 aa11.27□□□□□ -0.61
CTSA-213ENST00000606782 ZNF283Q8N7M2 679 aa11.27□□□□□ -0.61
CTSA-213ENST00000606782 BPIFB6Q8NFQ5 453 aa11.27□□□□□ -0.61
CTSA-213ENST00000606782 SEMA6DQ8NFY4 1073 aa11.27□□□□□ -0.61
CTSA-213ENST00000606782 OR52I1Q8NGK6 324 aa11.27□□□□□ -0.61
CTSA-213ENST00000606782 ASB17Q8WXJ9 295 aa11.27□□□□□ -0.61
CTSA-213ENST00000606782 CMBLQ96DG6 245 aa11.27□□□□□ -0.61
CTSA-213ENST00000606782 FAHD2AQ96GK7 314 aa11.27□□□□□ -0.61
CTSA-213ENST00000606782 CNBD2Q96M20 576 aa11.27□□□□□ -0.61
CTSA-213ENST00000606782 ZNF649Q9BS31 505 aa11.27□□□□□ -0.61
CTSA-213ENST00000606782 POFUT1Q9H488 388 aa11.27□□□□□ -0.61
CTSA-213ENST00000606782 CENPMQ9NSP4 180 aa11.27□□□□□ -0.61
CTSA-213ENST00000606782 FKBP14Q9NWM8 211 aa11.27□□□□□ -0.61
CTSA-213ENST00000606782 UBAP1Q9NZ09 502 aa11.27□□□□□ -0.61
CTSA-213ENST00000606782 MYRFQ9Y2G1 1151 aa11.27□□□□□ -0.61
CTSA-213ENST00000606782 ARHGAP32A7KAX9 2087 aa11.27□□□□□ -0.61
CTSA-213ENST00000606782 DYSFO75923 2080 aa11.26□□□□□ -0.61
CTSA-213ENST00000606782 TENM1Q9UKZ4 2725 aa11.26□□□□□ -0.61
CTSA-213ENST00000606782 A0A0G2JMP0 313 aa11.26□□□□□ -0.61
CTSA-213ENST00000606782 A0A0X1KG70 313 aa11.26□□□□□ -0.61
CTSA-213ENST00000606782 A0A1W2PQL4 384 aaPredicted RBP11.26□□□□□ -0.61
CTSA-213ENST00000606782 PHYHO14832 338 aa11.26□□□□□ -0.61
CTSA-213ENST00000606782 XPNPEP2O43895 674 aa11.26□□□□□ -0.61
CTSA-213ENST00000606782 TIMM8AO60220 97 aaPredicted RBP11.26□□□□□ -0.61
CTSA-213ENST00000606782 VENTXO95231 258 aa11.26□□□□□ -0.61
CTSA-213ENST00000606782 FADS2O95864 444 aaKnown RBP11.26□□□□□ -0.61
CTSA-213ENST00000606782 IGHV2-70P01814 119 aa11.26□□□□□ -0.61
CTSA-213ENST00000606782 IGHA1P01876 353 aa11.26□□□□□ -0.61
CTSA-213ENST00000606782 CCDC159P0C7I6 412 aa11.26□□□□□ -0.61
CTSA-213ENST00000606782 PIPP12273 146 aaPredicted RBP11.26□□□□□ -0.61
CTSA-213ENST00000606782 RAC2P15153 192 aa11.26□□□□□ -0.61
CTSA-213ENST00000606782 OPRL1P41146 370 aa11.26□□□□□ -0.61
CTSA-213ENST00000606782 RGS6P49758 472 aa11.26□□□□□ -0.61
CTSA-213ENST00000606782 TNFAIP6P98066 277 aaPredicted RBP11.26□□□□□ -0.61
CTSA-213ENST00000606782 ZNF85Q03923 595 aa11.26□□□□□ -0.61
CTSA-213ENST00000606782 EGR3Q06889 387 aa11.26□□□□□ -0.61
CTSA-213ENST00000606782 ZNF684Q5T5D7 378 aa11.26□□□□□ -0.61
CTSA-213ENST00000606782 KCTD18Q6PI47 426 aaPredicted RBP11.26□□□□□ -0.61
CTSA-213ENST00000606782 ZNF322Q6U7Q0 402 aaPredicted RBP11.26□□□□□ -0.61
CTSA-213ENST00000606782 FBXW12Q6X9E4 464 aa11.26□□□□□ -0.61
CTSA-213ENST00000606782 PEG10Q86TG7 708 aaKnown RBP11.26□□□□□ -0.61
CTSA-213ENST00000606782 ACBD7Q8N6N7 88 aa11.26□□□□□ -0.61
CTSA-213ENST00000606782 OR4M2Q8NGB6 313 aa11.26□□□□□ -0.61
CTSA-213ENST00000606782 OR8B4Q96RC9 309 aa11.26□□□□□ -0.61
CTSA-213ENST00000606782 KCNJ15Q99712 375 aa11.26□□□□□ -0.61
CTSA-213ENST00000606782 ATF6BQ99941 703 aa11.26□□□□□ -0.61
CTSA-213ENST00000606782 JAM3Q9BX67 310 aa11.26□□□□□ -0.61
CTSA-213ENST00000606782 CNOT2Q9NZN8 540 aaKnown RBP11.26□□□□□ -0.61
CTSA-213ENST00000606782 IL19Q9UHD0 177 aa11.26□□□□□ -0.61
CTSA-213ENST00000606782 POLR3KQ9Y2Y1 108 aaPredicted RBP11.26□□□□□ -0.61
CTSA-213ENST00000606782 NPTNQ9Y639 398 aa11.26□□□□□ -0.61
CTSA-213ENST00000606782 IRGMA1A4Y4 181 aa11.25□□□□□ -0.61
CTSA-213ENST00000606782 EFCAB10A6NFE3 127 aa11.25□□□□□ -0.61
CTSA-213ENST00000606782 PRR32B1ATL7 298 aa11.25□□□□□ -0.61
CTSA-213ENST00000606782 ZNF878C9JN71 531 aa11.25□□□□□ -0.61
CTSA-213ENST00000606782 SLC1A7O00341 560 aa11.25□□□□□ -0.61
CTSA-213ENST00000606782 ZNF254O75437 659 aa11.25□□□□□ -0.61
CTSA-213ENST00000606782 FSHBP01225 129 aa11.25□□□□□ -0.61
CTSA-213ENST00000606782 DBHP09172 617 aa11.25□□□□□ -0.61
CTSA-213ENST00000606782 ACSM4P0C7M7 580 aa11.25□□□□□ -0.61
CTSA-213ENST00000606782 TNFRSF1AP19438 455 aa11.25□□□□□ -0.61
CTSA-213ENST00000606782 TNFSF4P23510 183 aa11.25□□□□□ -0.61
CTSA-213ENST00000606782 DCKP27707 260 aa11.25□□□□□ -0.61
CTSA-213ENST00000606782 DCTDP32321 178 aa11.25□□□□□ -0.61
CTSA-213ENST00000606782 ACTC1P68032 377 aa11.25□□□□□ -0.61
CTSA-213ENST00000606782 ACTA1P68133 377 aa11.25□□□□□ -0.61
CTSA-213ENST00000606782 MED21Q13503 144 aa11.25□□□□□ -0.61
CTSA-213ENST00000606782 TUSC1Q2TAM9 212 aa11.25□□□□□ -0.61
CTSA-213ENST00000606782 TMEM155Q4W5P6 130 aa11.25□□□□□ -0.61
CTSA-213ENST00000606782 COLCA1Q6ZS62 124 aa11.25□□□□□ -0.61
CTSA-213ENST00000606782 SSX6Q7RTT6 188 aa11.25□□□□□ -0.61
CTSA-213ENST00000606782 C1QL2Q7Z5L3 287 aa11.25□□□□□ -0.61
CTSA-213ENST00000606782 NAA40Q86UY6 237 aa11.25□□□□□ -0.61
CTSA-213ENST00000606782 LRRC28Q86X40 367 aaPredicted RBP11.25□□□□□ -0.61
CTSA-213ENST00000606782 ZNF679Q8IYX0 411 aa11.25□□□□□ -0.61
CTSA-213ENST00000606782 OR10H4Q8NGA5 316 aa11.25□□□□□ -0.61
CTSA-213ENST00000606782 SLC7A6Q92536 515 aa11.25□□□□□ -0.61
CTSA-213ENST00000606782 TMEM80Q96HE8 168 aa11.25□□□□□ -0.61
CTSA-213ENST00000606782 GAL3ST1Q99999 423 aa11.25□□□□□ -0.61
CTSA-213ENST00000606782 YTHDF1Q9BYJ9 559 aaKnown RBP11.25□□□□□ -0.61
CTSA-213ENST00000606782 DUSP21Q9H596 190 aa11.25□□□□□ -0.61
CTSA-213ENST00000606782 OCEL1Q9H607 264 aa11.25□□□□□ -0.61
CTSA-213ENST00000606782 INPP5EQ9NRR6 644 aa11.25□□□□□ -0.61
CTSA-213ENST00000606782 TMEM106BQ9NUM4 274 aa11.25□□□□□ -0.61
CTSA-213ENST00000606782 DCAF16Q9NXF7 216 aa11.25□□□□□ -0.61
CTSA-213ENST00000606782 SCN3BQ9NY72 215 aa11.25□□□□□ -0.61
CTSA-213ENST00000606782 LOC105371242A0A075B767 164 aa11.24□□□□□ -0.61
CTSA-213ENST00000606782 A0A1B0GWJ7 208 aa11.24□□□□□ -0.61
CTSA-213ENST00000606782 DAPL1A0PJW8 107 aa11.24□□□□□ -0.61
CTSA-213ENST00000606782 SULT1C4O75897 302 aa11.24□□□□□ -0.61
CTSA-213ENST00000606782 H2BFMP0C1H6 154 aa11.24□□□□□ -0.61
CTSA-213ENST00000606782 EPHA1P21709 976 aa11.24□□□□□ -0.61
CTSA-213ENST00000606782 CRHBPP24387 322 aa11.24□□□□□ -0.61
CTSA-213ENST00000606782 TPTEP56180 551 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms