RNA–Protein interactions for RNA: ENST00000601919.5

SSBP4-212, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-212ENST00000601919 PIGLQ9Y2B2 252 aa16.01■□□□□ 0.15
SSBP4-212ENST00000601919 ZNF462Q96JM2 2506 aa16■□□□□ 0.15
SSBP4-212ENST00000601919 DPRXA6NFQ7 191 aa16■□□□□ 0.15
SSBP4-212ENST00000601919 WIPF3A6NGB9 483 aa16■□□□□ 0.15
SSBP4-212ENST00000601919 ABCD4O14678 606 aa16■□□□□ 0.15
SSBP4-212ENST00000601919 PIN1P1O15428 100 aa16■□□□□ 0.15
SSBP4-212ENST00000601919 CDRT1O95170 752 aa16■□□□□ 0.15
SSBP4-212ENST00000601919 GCH1P30793 250 aa16■□□□□ 0.15
SSBP4-212ENST00000601919 SDC2P34741 201 aa16■□□□□ 0.15
SSBP4-212ENST00000601919 GLRXP35754 106 aa16■□□□□ 0.15
SSBP4-212ENST00000601919 MAGEB1P43366 347 aa16■□□□□ 0.15
SSBP4-212ENST00000601919 KIR2DL3P43628 341 aa16■□□□□ 0.15
SSBP4-212ENST00000601919 PSMD7P51665 324 aa16■□□□□ 0.15
SSBP4-212ENST00000601919 SNTB2Q13425 540 aaKnown RBP16■□□□□ 0.15
SSBP4-212ENST00000601919 SPCS2Q15005 226 aa16■□□□□ 0.15
SSBP4-212ENST00000601919 RGS7BPQ6MZT1 257 aaPredicted RBP16■□□□□ 0.15
SSBP4-212ENST00000601919 PIAS4Q8N2W9 510 aaPredicted RBP16■□□□□ 0.15
SSBP4-212ENST00000601919 NUP37Q8NFH4 326 aa16■□□□□ 0.15
SSBP4-212ENST00000601919 NDNFQ8TB73 568 aa16■□□□□ 0.15
SSBP4-212ENST00000601919 SLC25A40Q8TBP6 338 aa16■□□□□ 0.15
SSBP4-212ENST00000601919 SOX7Q9BT81 388 aa16■□□□□ 0.15
SSBP4-212ENST00000601919 OR2J1Q9GZK6 312 aa16■□□□□ 0.15
SSBP4-212ENST00000601919 PPIL3Q9H2H8 161 aaKnown RBP16■□□□□ 0.15
SSBP4-212ENST00000601919 ZCCHC4Q9H5U6 513 aa16■□□□□ 0.15
SSBP4-212ENST00000601919 ZNF816-ZNF321PA0A0X1KG74 233 aa15.99■□□□□ 0.15
SSBP4-212ENST00000601919 MEGF11A6BM72 1044 aa15.99■□□□□ 0.15
SSBP4-212ENST00000601919 TRIM64BA6NI03 449 aa15.99■□□□□ 0.15
SSBP4-212ENST00000601919 VSTM5A8MXK1 200 aa15.99■□□□□ 0.15
SSBP4-212ENST00000601919 ATP6V1G2-DDX39BF2Z307 99 aa15.99■□□□□ 0.15
SSBP4-212ENST00000601919 CD3EP07766 207 aa15.99■□□□□ 0.15
SSBP4-212ENST00000601919 ERCC1P07992 297 aaPredicted RBP15.99■□□□□ 0.15
SSBP4-212ENST00000601919 HLXQ14774 488 aaPredicted RBP15.99■□□□□ 0.15
SSBP4-212ENST00000601919 SPATA46Q5T0L3 261 aa15.99■□□□□ 0.15
SSBP4-212ENST00000601919 NCMAPQ5T1S8 102 aa15.99■□□□□ 0.15
SSBP4-212ENST00000601919 SLC22A25Q6T423 547 aa15.99■□□□□ 0.15
SSBP4-212ENST00000601919 CROCCP3Q8IVE0 287 aa15.99■□□□□ 0.15
SSBP4-212ENST00000601919 FAM222BQ8WU58 562 aa15.99■□□□□ 0.15
SSBP4-212ENST00000601919 ADAT3Q96EY9 351 aaPredicted RBP15.99■□□□□ 0.15
SSBP4-212ENST00000601919 PLPPR2Q96GM1 343 aa15.99■□□□□ 0.15
SSBP4-212ENST00000601919 MARS2Q96GW9 593 aaKnown RBP15.99■□□□□ 0.15
SSBP4-212ENST00000601919 TECTBQ96PL2 329 aa15.99■□□□□ 0.15
SSBP4-212ENST00000601919 RALYQ9UKM9 306 aaKnown RBP15.99■□□□□ 0.15
SSBP4-212ENST00000601919 KLF2Q9Y5W3 355 aaPredicted RBP15.99■□□□□ 0.15
SSBP4-212ENST00000601919 A0A1W2PPW3 197 aa15.98■□□□□ 0.15
SSBP4-212ENST00000601919 CD300LBA8K4G0 201 aa15.98■□□□□ 0.15
SSBP4-212ENST00000601919 LMX1BO60663 402 aa15.98■□□□□ 0.15
SSBP4-212ENST00000601919 OCMP0CE72 109 aaPredicted RBP15.98■□□□□ 0.15
SSBP4-212ENST00000601919 FAHP16930 419 aa15.98■□□□□ 0.15
SSBP4-212ENST00000601919 RAB3AP20336 220 aa15.98■□□□□ 0.15
SSBP4-212ENST00000601919 SOX6P35712 828 aa15.98■□□□□ 0.15
SSBP4-212ENST00000601919 TGFBR1P36897 503 aa15.98■□□□□ 0.15
SSBP4-212ENST00000601919 SELENOVP59797 346 aa15.98■□□□□ 0.15
SSBP4-212ENST00000601919 NKX6-1P78426 367 aaPredicted RBP15.98■□□□□ 0.15
SSBP4-212ENST00000601919 SNTB1Q13884 538 aaKnown RBP15.98■□□□□ 0.15
SSBP4-212ENST00000601919 CNPY1Q3B7I2 92 aa15.98■□□□□ 0.15
SSBP4-212ENST00000601919 CLVS2Q5SYC1 327 aa15.98■□□□□ 0.15
SSBP4-212ENST00000601919 MBNL2Q5VZF2 373 aaKnown RBP15.98■□□□□ 0.15
SSBP4-212ENST00000601919 UTS2BQ765I0 119 aa15.98■□□□□ 0.15
SSBP4-212ENST00000601919 OR56B2PQ8NGI1 322 aa15.98■□□□□ 0.15
SSBP4-212ENST00000601919 KLF14Q8TD94 323 aaPredicted RBP15.98■□□□□ 0.15
SSBP4-212ENST00000601919 HAVCR1Q96D42 359 aa15.98■□□□□ 0.15
SSBP4-212ENST00000601919 CMBLQ96DG6 245 aa15.98■□□□□ 0.15
SSBP4-212ENST00000601919 CHST5Q9GZS9 411 aa15.98■□□□□ 0.15
SSBP4-212ENST00000601919 POFUT1Q9H488 388 aa15.98■□□□□ 0.15
SSBP4-212ENST00000601919 TAS2R4Q9NYW5 299 aa15.98■□□□□ 0.15
SSBP4-212ENST00000601919 KCNN3Q9UGI6 736 aa15.98■□□□□ 0.15
SSBP4-212ENST00000601919 SPTBN1Q01082 2364 aaKnown RBP15.98■□□□□ 0.15
SSBP4-212ENST00000601919 ANKRD61A6NGH8 418 aa15.97■□□□□ 0.15
SSBP4-212ENST00000601919 ANKRD30BLA7E2S9 258 aa15.97■□□□□ 0.15
SSBP4-212ENST00000601919 MAGEB3O15480 346 aa15.97■□□□□ 0.15
SSBP4-212ENST00000601919 ALX3O95076 343 aa15.97■□□□□ 0.15
SSBP4-212ENST00000601919 IGFBP3P17936 291 aaPredicted RBP15.97■□□□□ 0.15
SSBP4-212ENST00000601919 RAB3BP20337 219 aa15.97■□□□□ 0.15
SSBP4-212ENST00000601919 ACKR3P25106 362 aa15.97■□□□□ 0.15
SSBP4-212ENST00000601919 RANBP1P43487 201 aa15.97■□□□□ 0.15
SSBP4-212ENST00000601919 RORCP51449 518 aa15.97■□□□□ 0.15
SSBP4-212ENST00000601919 MXD1Q05195 221 aa15.97■□□□□ 0.15
SSBP4-212ENST00000601919 NKAIN3Q8N8D7 197 aa15.97■□□□□ 0.15
SSBP4-212ENST00000601919 OR1M1Q8NGA1 313 aa15.97■□□□□ 0.15
SSBP4-212ENST00000601919 DYNC2LI1Q8TCX1 351 aa15.97■□□□□ 0.15
SSBP4-212ENST00000601919 SSC4DQ8WTU2 575 aa15.97■□□□□ 0.15
SSBP4-212ENST00000601919 PIGTQ969N2 578 aa15.97■□□□□ 0.15
SSBP4-212ENST00000601919 ABCB9Q9NP78 766 aa15.97■□□□□ 0.15
SSBP4-212ENST00000601919 TMEM138Q9NPI0 162 aa15.97■□□□□ 0.15
SSBP4-212ENST00000601919 POU2F3Q9UKI9 436 aa15.97■□□□□ 0.15
SSBP4-212ENST00000601919 ATP23Q9Y6H3 246 aa15.97■□□□□ 0.15
SSBP4-212ENST00000601919 TRAV8-7A0A075B6U6 113 aa15.96■□□□□ 0.15
SSBP4-212ENST00000601919 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP15.96■□□□□ 0.15
SSBP4-212ENST00000601919 A6NIN4 97 aa15.96■□□□□ 0.15
SSBP4-212ENST00000601919 ANXA2P2A6NMY6 339 aa15.96■□□□□ 0.15
SSBP4-212ENST00000601919 J3QKU1 62 aa15.96■□□□□ 0.15
SSBP4-212ENST00000601919 SULT1B1O43704 296 aa15.96■□□□□ 0.15
SSBP4-212ENST00000601919 CST4P01036 141 aa15.96■□□□□ 0.15
SSBP4-212ENST00000601919 NRASP01111 189 aa15.96■□□□□ 0.15
SSBP4-212ENST00000601919 RPS19P39019 145 aaKnown RBP15.96■□□□□ 0.15
SSBP4-212ENST00000601919 ERVS71-1P61550 626 aa15.96■□□□□ 0.15
SSBP4-212ENST00000601919 SPOCK1Q08629 439 aa15.96■□□□□ 0.15
SSBP4-212ENST00000601919 CNN3Q15417 329 aaKnown RBP15.96■□□□□ 0.15
SSBP4-212ENST00000601919 DGUOKQ16854 277 aa15.96■□□□□ 0.15
SSBP4-212ENST00000601919 SYNPRQ8TBG9 265 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms