RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 JSRP1Q96MG2 331 aaPredicted RBP15.15■□□□□ 0.02
SHKBP1-205ENST00000594973 COMMD9Q9P000 198 aa15.15■□□□□ 0.02
SHKBP1-205ENST00000594973 B3GALT5Q9Y2C3 310 aa15.15■□□□□ 0.02
SHKBP1-205ENST00000594973 CAPZA1P52907 286 aa15.14■□□□□ 0.01
SHKBP1-205ENST00000594973 SLC17A1Q14916 467 aa15.14■□□□□ 0.01
SHKBP1-205ENST00000594973 OPN5Q6U736 354 aa15.14■□□□□ 0.01
SHKBP1-205ENST00000594973 ZNF679Q8IYX0 411 aa15.14■□□□□ 0.01
SHKBP1-205ENST00000594973 TMEM156Q8N614 296 aa15.14■□□□□ 0.01
SHKBP1-205ENST00000594973 M1APQ8TC57 530 aa15.14■□□□□ 0.01
SHKBP1-205ENST00000594973 ASB17Q8WXJ9 295 aa15.14■□□□□ 0.01
SHKBP1-205ENST00000594973 GNRHR2Q96P88 292 aa15.14■□□□□ 0.01
SHKBP1-205ENST00000594973 KCNK17Q96T54 332 aa15.14■□□□□ 0.01
SHKBP1-205ENST00000594973 ABHD6Q9BV23 337 aa15.14■□□□□ 0.01
SHKBP1-205ENST00000594973 EDEM2Q9BV94 578 aa15.14■□□□□ 0.01
SHKBP1-205ENST00000594973 MYOZ1Q9NP98 299 aaPredicted RBP15.14■□□□□ 0.01
SHKBP1-205ENST00000594973 UPB1Q9UBR1 384 aa15.14■□□□□ 0.01
SHKBP1-205ENST00000594973 PISDQ9UG56 409 aa15.14■□□□□ 0.01
SHKBP1-205ENST00000594973 RNF222A6NCQ9 220 aa15.14■□□□□ 0.01
SHKBP1-205ENST00000594973 TMEM212A6NML5 194 aa15.14■□□□□ 0.01
SHKBP1-205ENST00000594973 B4E171 279 aa15.14■□□□□ 0.01
SHKBP1-205ENST00000594973 PNPP00491 289 aa15.14■□□□□ 0.01
SHKBP1-205ENST00000594973 ZNF44P15621 663 aa15.14■□□□□ 0.01
SHKBP1-205ENST00000594973 CBR1P16152 277 aa15.14■□□□□ 0.01
SHKBP1-205ENST00000594973 TCN2P20062 427 aa15.14■□□□□ 0.01
SHKBP1-205ENST00000594973 AGAP20933 346 aa15.14■□□□□ 0.01
SHKBP1-205ENST00000594973 PMELP40967 661 aa15.14■□□□□ 0.01
SHKBP1-205ENST00000594973 TSPAN7P41732 249 aa15.14■□□□□ 0.01
SHKBP1-205ENST00000594973 KIR3DL2P43630 455 aa15.14■□□□□ 0.01
SHKBP1-205ENST00000594973 SSR4P51571 173 aa15.14■□□□□ 0.01
SHKBP1-205ENST00000594973 TMEM176BQ3YBM2 270 aaPredicted RBP15.14■□□□□ 0.01
SHKBP1-205ENST00000594973 NDUFAF7Q7L592 441 aa15.14■□□□□ 0.01
SHKBP1-205ENST00000594973 LINC00346Q8IVM7 164 aa15.14■□□□□ 0.01
SHKBP1-205ENST00000594973 OR5M8Q8NGP6 311 aa15.14■□□□□ 0.01
SHKBP1-205ENST00000594973 STOML3Q8TAV4 291 aa15.14■□□□□ 0.01
SHKBP1-205ENST00000594973 WNT2BQ93097 391 aa15.14■□□□□ 0.01
SHKBP1-205ENST00000594973 TMEM106AQ96A25 262 aa15.14■□□□□ 0.01
SHKBP1-205ENST00000594973 C4orf45Q96LM5 186 aa15.14■□□□□ 0.01
SHKBP1-205ENST00000594973 DCBLD2Q96PD2 775 aa15.14■□□□□ 0.01
SHKBP1-205ENST00000594973 TREM1Q9NP99 234 aa15.14■□□□□ 0.01
SHKBP1-205ENST00000594973 B3GAT1Q9P2W7 334 aa15.14■□□□□ 0.01
SHKBP1-205ENST00000594973 PADI1Q9ULC6 663 aa15.14■□□□□ 0.01
SHKBP1-205ENST00000594973 SLC22A13Q9Y226 551 aa15.14■□□□□ 0.01
SHKBP1-205ENST00000594973 MAS1P04201 325 aa15.13■□□□□ 0.01
SHKBP1-205ENST00000594973 AKAIN1P0CW23 69 aa15.13■□□□□ 0.01
SHKBP1-205ENST00000594973 ZNF823P16415 610 aa15.13■□□□□ 0.01
SHKBP1-205ENST00000594973 EIF2S3P41091 472 aaKnown RBP15.13■□□□□ 0.01
SHKBP1-205ENST00000594973 RASGEF1BQ0VAM2 473 aa15.13■□□□□ 0.01
SHKBP1-205ENST00000594973 ACER2Q5QJU3 275 aa15.13■□□□□ 0.01
SHKBP1-205ENST00000594973 STAC2Q6ZMT1 411 aa15.13■□□□□ 0.01
SHKBP1-205ENST00000594973 RPS19BP1Q86WX3 136 aaKnown RBP15.13■□□□□ 0.01
SHKBP1-205ENST00000594973 FADS6Q8N9I5 356 aa15.13■□□□□ 0.01
SHKBP1-205ENST00000594973 EXO5Q9H790 373 aa15.13■□□□□ 0.01
SHKBP1-205ENST00000594973 ACKR4Q9NPB9 350 aa15.13■□□□□ 0.01
SHKBP1-205ENST00000594973 UFSP2Q9NUQ7 469 aa15.13■□□□□ 0.01
SHKBP1-205ENST00000594973 TREM2Q9NZC2 230 aa15.13■□□□□ 0.01
SHKBP1-205ENST00000594973 R4GN57 208 aa15.13■□□□□ 0.01
SHKBP1-205ENST00000594973 EML6Q6ZMW3 1958 aa15.13■□□□□ 0.01
SHKBP1-205ENST00000594973 GGT3PA6NGU5 568 aa15.12■□□□□ 0.01
SHKBP1-205ENST00000594973 ZNF814B7Z6K7 855 aa15.12■□□□□ 0.01
SHKBP1-205ENST00000594973 F12P00748 615 aaPredicted RBP15.12■□□□□ 0.01
SHKBP1-205ENST00000594973 ITGB2P05107 769 aa15.12■□□□□ 0.01
SHKBP1-205ENST00000594973 PTHLHP12272 177 aa15.12■□□□□ 0.01
SHKBP1-205ENST00000594973 RCC1P18754 421 aaPredicted RBP15.12■□□□□ 0.01
SHKBP1-205ENST00000594973 NFYBP25208 207 aa15.12■□□□□ 0.01
SHKBP1-205ENST00000594973 DLSTP36957 453 aa15.12■□□□□ 0.01
SHKBP1-205ENST00000594973 SCAND1P57086 179 aa15.12■□□□□ 0.01
SHKBP1-205ENST00000594973 MFGE8Q08431 387 aaPredicted RBP15.12■□□□□ 0.01
SHKBP1-205ENST00000594973 FABP9Q0Z7S8 132 aa15.12■□□□□ 0.01
SHKBP1-205ENST00000594973 OR2B11Q5JQS5 317 aa15.12■□□□□ 0.01
SHKBP1-205ENST00000594973 KCTD18Q6PI47 426 aaPredicted RBP15.12■□□□□ 0.01
SHKBP1-205ENST00000594973 SLC26A10Q8NG04 563 aa15.12■□□□□ 0.01
SHKBP1-205ENST00000594973 GPR148Q8TDV2 347 aa15.12■□□□□ 0.01
SHKBP1-205ENST00000594973 RNF141Q8WVD5 230 aa15.12■□□□□ 0.01
SHKBP1-205ENST00000594973 TSEN15Q8WW01 171 aaKnown RBP15.12■□□□□ 0.01
SHKBP1-205ENST00000594973 SLITRK2Q9H156 845 aa15.12■□□□□ 0.01
SHKBP1-205ENST00000594973 AHCTF1Q8WYP5 2266 aa15.12■□□□□ 0.01
SHKBP1-205ENST00000594973 TRAV8-7A0A075B6U6 113 aa15.12■□□□□ 0.01
SHKBP1-205ENST00000594973 TRBV5-5A0A0J9YX44 114 aa15.12■□□□□ 0.01
SHKBP1-205ENST00000594973 XRCC3O43542 346 aa15.12■□□□□ 0.01
SHKBP1-205ENST00000594973 IGHV2-5P01817 119 aa15.12■□□□□ 0.01
SHKBP1-205ENST00000594973 ZNF883P0CG24 379 aa15.12■□□□□ 0.01
SHKBP1-205ENST00000594973 ADRA2CP18825 462 aa15.12■□□□□ 0.01
SHKBP1-205ENST00000594973 KLK2P20151 261 aa15.12■□□□□ 0.01
SHKBP1-205ENST00000594973 CASRP41180 1078 aa15.12■□□□□ 0.01
SHKBP1-205ENST00000594973 ZNF468Q5VIY5 522 aaPredicted RBP15.12■□□□□ 0.01
SHKBP1-205ENST00000594973 DNM1P34Q6PK57 102 aa15.12■□□□□ 0.01
SHKBP1-205ENST00000594973 TIPARPQ7Z3E1 657 aaKnown RBP15.12■□□□□ 0.01
SHKBP1-205ENST00000594973 DCXRQ7Z4W1 244 aa15.12■□□□□ 0.01
SHKBP1-205ENST00000594973 STEAP2Q8NFT2 490 aa15.12■□□□□ 0.01
SHKBP1-205ENST00000594973 GTF3AQ92664 365 aaKnown RBP15.12■□□□□ 0.01
SHKBP1-205ENST00000594973 TMPRSS5Q9H3S3 457 aa15.12■□□□□ 0.01
SHKBP1-205ENST00000594973 RCC2Q9P258 522 aaKnown RBP15.12■□□□□ 0.01
SHKBP1-205ENST00000594973 TCFL5Q9UL49 500 aa15.12■□□□□ 0.01
SHKBP1-205ENST00000594973 LRP12Q9Y561 859 aa15.12■□□□□ 0.01
SHKBP1-205ENST00000594973 OR2AT4A6NND4 320 aa15.11■□□□□ 0.01
SHKBP1-205ENST00000594973 F5H0A9 414 aaPredicted RBP15.11■□□□□ 0.01
SHKBP1-205ENST00000594973 DOK2O60496 412 aa15.11■□□□□ 0.01
SHKBP1-205ENST00000594973 GPX4P36969 197 aaPredicted RBP15.11■□□□□ 0.01
SHKBP1-205ENST00000594973 SSBP1Q04837 148 aaKnown RBP15.11■□□□□ 0.01
SHKBP1-205ENST00000594973 PJVKQ0ZLH3 352 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms