RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 PPIAL4FP0DN26 164 aa15.48■□□□□ 0.07
SHKBP1-202ENST00000593764 CFL1P23528 166 aaKnown RBP15.48■□□□□ 0.07
SHKBP1-202ENST00000593764 GATA3P23771 443 aa15.48■□□□□ 0.07
SHKBP1-202ENST00000593764 SRSF2Q01130 221 aaKnown RBP15.48■□□□□ 0.07
SHKBP1-202ENST00000593764 ZNF404Q494X3 552 aa15.48■□□□□ 0.07
SHKBP1-202ENST00000593764 LCN1P1Q5VSP4 162 aa15.48■□□□□ 0.07
SHKBP1-202ENST00000593764 NXNL2Q5VZ03 156 aa15.48■□□□□ 0.07
SHKBP1-202ENST00000593764 DEGS2Q6QHC5 323 aa15.48■□□□□ 0.07
SHKBP1-202ENST00000593764 C1orf87Q8N0U7 546 aa15.48■□□□□ 0.07
SHKBP1-202ENST00000593764 SPERTQ8NA61 448 aa15.48■□□□□ 0.07
SHKBP1-202ENST00000593764 LYZL4Q96KX0 146 aa15.48■□□□□ 0.07
SHKBP1-202ENST00000593764 IL4I1Q96RQ9 567 aa15.48■□□□□ 0.07
SHKBP1-202ENST00000593764 GABARAPL3Q9BY60 117 aa15.48■□□□□ 0.07
SHKBP1-202ENST00000593764 RGCCQ9H4X1 137 aa15.48■□□□□ 0.07
SHKBP1-202ENST00000593764 METTL17Q9H7H0 456 aaPredicted RBP15.48■□□□□ 0.07
SHKBP1-202ENST00000593764 MMP26Q9NRE1 261 aa15.48■□□□□ 0.07
SHKBP1-202ENST00000593764 OPN4Q9UHM6 478 aa15.48■□□□□ 0.07
SHKBP1-202ENST00000593764 ENOPH1Q9UHY7 261 aa15.48■□□□□ 0.07
SHKBP1-202ENST00000593764 PPIAL4AQ9Y536 164 aa15.48■□□□□ 0.07
SHKBP1-202ENST00000593764 LOC105371242A0A075B767 164 aa15.47■□□□□ 0.07
SHKBP1-202ENST00000593764 ANKRD30BLA7E2S9 258 aa15.47■□□□□ 0.07
SHKBP1-202ENST00000593764 A8MXK9 166 aa15.47■□□□□ 0.07
SHKBP1-202ENST00000593764 J3QLI3 93 aa15.47■□□□□ 0.07
SHKBP1-202ENST00000593764 PSMA6P60900 246 aaKnown RBP15.47■□□□□ 0.07
SHKBP1-202ENST00000593764 ROM1Q03395 351 aa15.47■□□□□ 0.07
SHKBP1-202ENST00000593764 OR8B8Q15620 311 aa15.47■□□□□ 0.07
SHKBP1-202ENST00000593764 GFOD2Q3B7J2 385 aa15.47■□□□□ 0.07
SHKBP1-202ENST00000593764 KRT77Q7Z794 578 aa15.47■□□□□ 0.07
SHKBP1-202ENST00000593764 RFLNBQ8N5W9 214 aa15.47■□□□□ 0.07
SHKBP1-202ENST00000593764 C19orf18Q8NEA5 215 aa15.47■□□□□ 0.07
SHKBP1-202ENST00000593764 OR8B12Q8NGG6 310 aa15.47■□□□□ 0.07
SHKBP1-202ENST00000593764 OR11L1Q8NGX0 322 aa15.47■□□□□ 0.07
SHKBP1-202ENST00000593764 FN3KRPQ9HA64 309 aa15.47■□□□□ 0.07
SHKBP1-202ENST00000593764 RNF7Q9UBF6 113 aa15.47■□□□□ 0.07
SHKBP1-202ENST00000593764 METRNQ9UJH8 293 aa15.47■□□□□ 0.07
SHKBP1-202ENST00000593764 RHBDD3Q9Y3P4 386 aa15.47■□□□□ 0.07
SHKBP1-202ENST00000593764 DOCK11Q5JSL3 2073 aa15.47■□□□□ 0.07
SHKBP1-202ENST00000593764 SLC22A31A6NKX4 558 aa15.46■□□□□ 0.07
SHKBP1-202ENST00000593764 RNF212BA8MTL3 300 aa15.46■□□□□ 0.07
SHKBP1-202ENST00000593764 EBAG9O00559 213 aa15.46■□□□□ 0.07
SHKBP1-202ENST00000593764 GRPP07492 148 aa15.46■□□□□ 0.07
SHKBP1-202ENST00000593764 IRF2P14316 349 aa15.46■□□□□ 0.07
SHKBP1-202ENST00000593764 CPT2P23786 658 aa15.46■□□□□ 0.07
SHKBP1-202ENST00000593764 ACKR3P25106 362 aa15.46■□□□□ 0.07
SHKBP1-202ENST00000593764 KCTD18Q6PI47 426 aaPredicted RBP15.46■□□□□ 0.07
SHKBP1-202ENST00000593764 ZNF826PQ6ZT77 177 aa15.46■□□□□ 0.07
SHKBP1-202ENST00000593764 WDR86Q86TI4 376 aa15.46■□□□□ 0.07
SHKBP1-202ENST00000593764 C11orf53Q8IXP5 236 aa15.46■□□□□ 0.07
SHKBP1-202ENST00000593764 ZNF679Q8IYX0 411 aa15.46■□□□□ 0.07
SHKBP1-202ENST00000593764 TMEM158Q8WZ71 300 aa15.46■□□□□ 0.07
SHKBP1-202ENST00000593764 OR8B4Q96RC9 309 aa15.46■□□□□ 0.07
SHKBP1-202ENST00000593764 CNN2Q99439 309 aaKnown RBP15.46■□□□□ 0.07
SHKBP1-202ENST00000593764 RBM4BQ9BQ04 359 aaKnown RBP15.46■□□□□ 0.07
SHKBP1-202ENST00000593764 C7orf69Q9H7B7 122 aa15.46■□□□□ 0.07
SHKBP1-202ENST00000593764 ADGRL4Q9HBW9 690 aa15.46■□□□□ 0.07
SHKBP1-202ENST00000593764 FAM206AQ9NX38 181 aa15.46■□□□□ 0.07
SHKBP1-202ENST00000593764 HAO2Q9NYQ3 351 aa15.46■□□□□ 0.07
SHKBP1-202ENST00000593764 H2AFY2Q9P0M6 372 aaPredicted RBP15.46■□□□□ 0.07
SHKBP1-202ENST00000593764 MIOXQ9UGB7 285 aa15.46■□□□□ 0.07
SHKBP1-202ENST00000593764 TMEM14AQ9Y6G1 99 aa15.46■□□□□ 0.07
SHKBP1-202ENST00000593764 STAB1Q9NY15 2570 aa15.45■□□□□ 0.06
SHKBP1-202ENST00000593764 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP15.45■□□□□ 0.06
SHKBP1-202ENST00000593764 ACOD1A6NK06 481 aa15.45■□□□□ 0.06
SHKBP1-202ENST00000593764 ALPLP05186 524 aa15.45■□□□□ 0.06
SHKBP1-202ENST00000593764 ADRA2CP18825 462 aa15.45■□□□□ 0.06
SHKBP1-202ENST00000593764 DCTDP32321 178 aa15.45■□□□□ 0.06
SHKBP1-202ENST00000593764 PAX2Q02962 417 aa15.45■□□□□ 0.06
SHKBP1-202ENST00000593764 KRTAP24-1Q3LI83 254 aa15.45■□□□□ 0.06
SHKBP1-202ENST00000593764 ESCO2Q56NI9 601 aa15.45■□□□□ 0.06
SHKBP1-202ENST00000593764 ZFP1Q6P2D0 407 aa15.45■□□□□ 0.06
SHKBP1-202ENST00000593764 LYPD2Q6UXB3 125 aa15.45■□□□□ 0.06
SHKBP1-202ENST00000593764 C1QL2Q7Z5L3 287 aa15.45■□□□□ 0.06
SHKBP1-202ENST00000593764 PHC2Q8IXK0 858 aa15.45■□□□□ 0.06
SHKBP1-202ENST00000593764 DEFB108BQ8NET1 73 aa15.45■□□□□ 0.06
SHKBP1-202ENST00000593764 CSNK2A3Q8NEV1 391 aa15.45■□□□□ 0.06
SHKBP1-202ENST00000593764 ASB17Q8WXJ9 295 aa15.45■□□□□ 0.06
SHKBP1-202ENST00000593764 MROQ9BYG7 248 aa15.45■□□□□ 0.06
SHKBP1-202ENST00000593764 TTTY10Q9BZA0 68 aa15.45■□□□□ 0.06
SHKBP1-202ENST00000593764 RIBC2Q9H4K1 309 aa15.45■□□□□ 0.06
SHKBP1-202ENST00000593764 C14orf119Q9NWQ9 140 aa15.45■□□□□ 0.06
SHKBP1-202ENST00000593764 C1orf123Q9NWV4 160 aa15.45■□□□□ 0.06
SHKBP1-202ENST00000593764 LRCH1Q9Y2L9 728 aa15.45■□□□□ 0.06
SHKBP1-202ENST00000593764 TMEM269A0A1B0GVZ9 245 aa15.44■□□□□ 0.06
SHKBP1-202ENST00000593764 E9PQ18 207 aa15.44■□□□□ 0.06
SHKBP1-202ENST00000593764 TNFRSF13BO14836 293 aaPredicted RBP15.44■□□□□ 0.06
SHKBP1-202ENST00000593764 ZNF254O75437 659 aa15.44■□□□□ 0.06
SHKBP1-202ENST00000593764 LHBP01229 141 aa15.44■□□□□ 0.06
SHKBP1-202ENST00000593764 RPS2P15880 293 aaKnown RBP15.44■□□□□ 0.06
SHKBP1-202ENST00000593764 ZNF12P17014 697 aa15.44■□□□□ 0.06
SHKBP1-202ENST00000593764 MZT1Q08AG7 82 aa15.44■□□□□ 0.06
SHKBP1-202ENST00000593764 SFRP4Q6FHJ7 346 aaPredicted RBP15.44■□□□□ 0.06
SHKBP1-202ENST00000593764 GID4Q8IVV7 300 aa15.44■□□□□ 0.06
SHKBP1-202ENST00000593764 SLC35F2Q8IXU6 374 aa15.44■□□□□ 0.06
SHKBP1-202ENST00000593764 OR8S1Q8NH09 359 aa15.44■□□□□ 0.06
SHKBP1-202ENST00000593764 SPATA3Q8NHX4 192 aa15.44■□□□□ 0.06
SHKBP1-202ENST00000593764 ITPKCQ96DU7 683 aa15.44■□□□□ 0.06
SHKBP1-202ENST00000593764 NEIL1Q96FI4 390 aaPredicted RBP15.44■□□□□ 0.06
SHKBP1-202ENST00000593764 PAPOLGQ9BWT3 736 aaKnown RBP15.44■□□□□ 0.06
SHKBP1-202ENST00000593764 SSBP3Q9BWW4 388 aaPredicted RBP15.44■□□□□ 0.06
SHKBP1-202ENST00000593764 ZNF391Q9UJN7 358 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms