RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 GATAD2BQ8WXI9 593 aa12.34□□□□□ -0.43
COMMD4-225ENST00000569245 SLC7A6Q92536 515 aa12.34□□□□□ -0.43
COMMD4-225ENST00000569245 GTF3AQ92664 365 aaKnown RBP12.34□□□□□ -0.43
COMMD4-225ENST00000569245 C4orf36Q96KX1 117 aa12.34□□□□□ -0.43
COMMD4-225ENST00000569245 MGLLQ99685 303 aa12.34□□□□□ -0.43
COMMD4-225ENST00000569245 MROQ9BYG7 248 aa12.34□□□□□ -0.43
COMMD4-225ENST00000569245 PNRC2Q9NPJ4 139 aaKnown RBP12.34□□□□□ -0.43
COMMD4-225ENST00000569245 BABAM2Q9NXR7 383 aa12.34□□□□□ -0.43
COMMD4-225ENST00000569245 MRM2Q9UI43 246 aaKnown RBP12.34□□□□□ -0.43
COMMD4-225ENST00000569245 RTTNQ86VV8 2226 aa12.33□□□□□ -0.44
COMMD4-225ENST00000569245 J3QLW9 94 aa12.33□□□□□ -0.44
COMMD4-225ENST00000569245 PPIHO43447 177 aaKnown RBP12.33□□□□□ -0.44
COMMD4-225ENST00000569245 TIMM8AO60220 97 aaPredicted RBP12.33□□□□□ -0.44
COMMD4-225ENST00000569245 NCR1O76036 304 aa12.33□□□□□ -0.44
COMMD4-225ENST00000569245 ZNF19P17023 458 aa12.33□□□□□ -0.44
COMMD4-225ENST00000569245 DCTDP32321 178 aa12.33□□□□□ -0.44
COMMD4-225ENST00000569245 OPRL1P41146 370 aa12.33□□□□□ -0.44
COMMD4-225ENST00000569245 GP2P55259 537 aaKnown RBP12.33□□□□□ -0.44
COMMD4-225ENST00000569245 TMEM33P57088 247 aa12.33□□□□□ -0.44
COMMD4-225ENST00000569245 MRPS11P82912 194 aaKnown RBP12.33□□□□□ -0.44
COMMD4-225ENST00000569245 TIGD6Q17RP2 521 aa12.33□□□□□ -0.44
COMMD4-225ENST00000569245 TP53I3Q53FA7 332 aa12.33□□□□□ -0.44
COMMD4-225ENST00000569245 CCDC92Q53HC0 331 aaPredicted RBP12.33□□□□□ -0.44
COMMD4-225ENST00000569245 FAM166AQ6J272 317 aa12.33□□□□□ -0.44
COMMD4-225ENST00000569245 CFAP77Q6ZQR2 320 aa12.33□□□□□ -0.44
COMMD4-225ENST00000569245 FAM220AQ7Z4H9 259 aa12.33□□□□□ -0.44
COMMD4-225ENST00000569245 KRT77Q7Z794 578 aa12.33□□□□□ -0.44
COMMD4-225ENST00000569245 OR10S1Q8NGN2 331 aa12.33□□□□□ -0.44
COMMD4-225ENST00000569245 OR13F1Q8NGS4 319 aa12.33□□□□□ -0.44
COMMD4-225ENST00000569245 MSI2Q96DH6 328 aaKnown RBP12.33□□□□□ -0.44
COMMD4-225ENST00000569245 SLAMF6Q96DU3 332 aa12.33□□□□□ -0.44
COMMD4-225ENST00000569245 PELI1Q96FA3 418 aa12.33□□□□□ -0.44
COMMD4-225ENST00000569245 TTTY10Q9BZA0 68 aa12.33□□□□□ -0.44
COMMD4-225ENST00000569245 CYSLTR2Q9NS75 346 aa12.33□□□□□ -0.44
COMMD4-225ENST00000569245 DDX28Q9NUL7 540 aaKnown RBP12.33□□□□□ -0.44
COMMD4-225ENST00000569245 TBCCD1Q9NVR7 557 aa12.33□□□□□ -0.44
COMMD4-225ENST00000569245 GNG8Q9UK08 70 aa12.33□□□□□ -0.44
COMMD4-225ENST00000569245 IKZF2Q9UKS7 526 aa12.33□□□□□ -0.44
COMMD4-225ENST00000569245 SONP18583 2426 aaKnown RBP12.33□□□□□ -0.44
COMMD4-225ENST00000569245 CR1P17927 2039 aa12.33□□□□□ -0.44
COMMD4-225ENST00000569245 ANK3Q12955 4377 aaKnown RBP12.33□□□□□ -0.44
COMMD4-225ENST00000569245 OR6C6A6NF89 314 aa12.32□□□□□ -0.44
COMMD4-225ENST00000569245 ZNF878C9JN71 531 aa12.32□□□□□ -0.44
COMMD4-225ENST00000569245 H3BSA7 217 aa12.32□□□□□ -0.44
COMMD4-225ENST00000569245 MAGEB4O15481 346 aaPredicted RBP12.32□□□□□ -0.44
COMMD4-225ENST00000569245 ICMTO60725 284 aa12.32□□□□□ -0.44
COMMD4-225ENST00000569245 LILRA1O75019 489 aa12.32□□□□□ -0.44
COMMD4-225ENST00000569245 TGFAP01135 160 aa12.32□□□□□ -0.44
COMMD4-225ENST00000569245 DBHP09172 617 aa12.32□□□□□ -0.44
COMMD4-225ENST00000569245 PSMB9P28065 219 aa12.32□□□□□ -0.44
COMMD4-225ENST00000569245 LIPAP38571 399 aa12.32□□□□□ -0.44
COMMD4-225ENST00000569245 TGM4P49221 684 aa12.32□□□□□ -0.44
COMMD4-225ENST00000569245 GBX2P52951 348 aaPredicted RBP12.32□□□□□ -0.44
COMMD4-225ENST00000569245 TAS2R43P59537 309 aa12.32□□□□□ -0.44
COMMD4-225ENST00000569245 CHRFAM7AQ494W8 412 aa12.32□□□□□ -0.44
COMMD4-225ENST00000569245 CCDC58Q4VC31 144 aa12.32□□□□□ -0.44
COMMD4-225ENST00000569245 ARMCX4Q5H9R4 360 aa12.32□□□□□ -0.44
COMMD4-225ENST00000569245 LRRN1Q6UXK5 716 aa12.32□□□□□ -0.44
COMMD4-225ENST00000569245 KLBQ86Z14 1044 aa12.32□□□□□ -0.44
COMMD4-225ENST00000569245 YIPF7Q8N8F6 280 aa12.32□□□□□ -0.44
COMMD4-225ENST00000569245 YIPF5Q969M3 257 aa12.32□□□□□ -0.44
COMMD4-225ENST00000569245 TMIGD2Q96BF3 282 aa12.32□□□□□ -0.44
COMMD4-225ENST00000569245 CMBLQ96DG6 245 aa12.32□□□□□ -0.44
COMMD4-225ENST00000569245 OPALINQ96PE5 141 aa12.32□□□□□ -0.44
COMMD4-225ENST00000569245 BEX2Q9BXY8 128 aa12.32□□□□□ -0.44
COMMD4-225ENST00000569245 EGLN1Q9GZT9 426 aa12.32□□□□□ -0.44
COMMD4-225ENST00000569245 NARFLQ9H6Q4 476 aa12.32□□□□□ -0.44
COMMD4-225ENST00000569245 NIPAL2Q9H841 368 aa12.32□□□□□ -0.44
COMMD4-225ENST00000569245 SAP30LQ9HAJ7 183 aa12.32□□□□□ -0.44
COMMD4-225ENST00000569245 TRIM36Q9NQ86 728 aa12.32□□□□□ -0.44
COMMD4-225ENST00000569245 ZNF275Q9NSD4 429 aaPredicted RBP12.32□□□□□ -0.44
COMMD4-225ENST00000569245 ACOXLQ9NUZ1 547 aa12.32□□□□□ -0.44
COMMD4-225ENST00000569245 NKIRAS2Q9NYR9 191 aa12.32□□□□□ -0.44
COMMD4-225ENST00000569245 KCNS2Q9ULS6 477 aa12.32□□□□□ -0.44
COMMD4-225ENST00000569245 STARD10Q9Y365 291 aa12.32□□□□□ -0.44
COMMD4-225ENST00000569245 IGHV1-69-2A0A0G2JMI3 117 aa12.31□□□□□ -0.44
COMMD4-225ENST00000569245 PSMD9O00233 223 aa12.31□□□□□ -0.44
COMMD4-225ENST00000569245 LMX1BO60663 402 aa12.31□□□□□ -0.44
COMMD4-225ENST00000569245 LALBAP00709 142 aa12.31□□□□□ -0.44
COMMD4-225ENST00000569245 IGHV1-46P01743 117 aa12.31□□□□□ -0.44
COMMD4-225ENST00000569245 TUBG1P23258 451 aa12.31□□□□□ -0.44
COMMD4-225ENST00000569245 MMP15P51511 669 aa12.31□□□□□ -0.44
COMMD4-225ENST00000569245 RIDAP52758 137 aaKnown RBP12.31□□□□□ -0.44
COMMD4-225ENST00000569245 GRB2P62993 217 aaKnown RBP12.31□□□□□ -0.44
COMMD4-225ENST00000569245 ECH1Q13011 328 aa12.31□□□□□ -0.44
COMMD4-225ENST00000569245 PSG7Q13046 419 aa12.31□□□□□ -0.44
COMMD4-225ENST00000569245 GPR50Q13585 617 aa12.31□□□□□ -0.44
COMMD4-225ENST00000569245 TPBGQ13641 420 aa12.31□□□□□ -0.44
COMMD4-225ENST00000569245 ZMAT1Q5H9K5 638 aa12.31□□□□□ -0.44
COMMD4-225ENST00000569245 LIPNQ5VXI9 398 aa12.31□□□□□ -0.44
COMMD4-225ENST00000569245 FDX2Q6P4F2 183 aa12.31□□□□□ -0.44
COMMD4-225ENST00000569245 GPR141Q7Z602 305 aa12.31□□□□□ -0.44
COMMD4-225ENST00000569245 PRIMA1Q86XR5 153 aa12.31□□□□□ -0.44
COMMD4-225ENST00000569245 OR5L1Q8NGL2 311 aa12.31□□□□□ -0.44
COMMD4-225ENST00000569245 HPS1Q92902 700 aa12.31□□□□□ -0.44
COMMD4-225ENST00000569245 RNF166Q96A37 237 aaPredicted RBP12.31□□□□□ -0.44
COMMD4-225ENST00000569245 DCLRE1CQ96SD1 692 aaKnown RBP12.31□□□□□ -0.44
COMMD4-225ENST00000569245 HDHD2Q9H0R4 259 aa12.31□□□□□ -0.44
COMMD4-225ENST00000569245 POFUT1Q9H488 388 aa12.31□□□□□ -0.44
COMMD4-225ENST00000569245 MSL2Q9HCI7 577 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms