RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 ANOS1P23352 680 aa11.14□□□□□ -0.63
SPG7-209ENST00000564047 RAD52P43351 418 aa11.14□□□□□ -0.63
SPG7-209ENST00000564047 RPS25P62851 125 aaKnown RBP11.14□□□□□ -0.63
SPG7-209ENST00000564047 TRIM16LQ309B1 348 aa11.14□□□□□ -0.63
SPG7-209ENST00000564047 CD200R1LQ6Q8B3 271 aa11.14□□□□□ -0.63
SPG7-209ENST00000564047 ZNF554Q86TJ5 538 aa11.14□□□□□ -0.63
SPG7-209ENST00000564047 C1orf174Q8IYL3 243 aa11.14□□□□□ -0.63
SPG7-209ENST00000564047 DRAXINQ8NBI3 349 aaPredicted RBP11.14□□□□□ -0.63
SPG7-209ENST00000564047 CCDC54Q8NEL0 328 aa11.14□□□□□ -0.63
SPG7-209ENST00000564047 OR5L1Q8NGL2 311 aa11.14□□□□□ -0.63
SPG7-209ENST00000564047 ABHD4Q8TB40 342 aa11.14□□□□□ -0.63
SPG7-209ENST00000564047 GPR148Q8TDV2 347 aa11.14□□□□□ -0.63
SPG7-209ENST00000564047 SGK3Q96BR1 496 aa11.14□□□□□ -0.63
SPG7-209ENST00000564047 KCNS3Q9BQ31 491 aa11.14□□□□□ -0.63
SPG7-209ENST00000564047 TMED9Q9BVK6 235 aa11.14□□□□□ -0.63
SPG7-209ENST00000564047 TUBG2Q9NRH3 451 aa11.14□□□□□ -0.63
SPG7-209ENST00000564047 HHLA2Q9UM44 414 aa11.14□□□□□ -0.63
SPG7-209ENST00000564047 KLF2Q9Y5W3 355 aaPredicted RBP11.14□□□□□ -0.63
SPG7-209ENST00000564047 hCG_2014768A0A024R1R8 64 aa11.13□□□□□ -0.63
SPG7-209ENST00000564047 A0A1B0GTI1 187 aa11.13□□□□□ -0.63
SPG7-209ENST00000564047 A0A1B0GVI7 797 aa11.13□□□□□ -0.63
SPG7-209ENST00000564047 LOC107986453A0A1B0GWG9 222 aa11.13□□□□□ -0.63
SPG7-209ENST00000564047 DPRXA6NFQ7 191 aa11.13□□□□□ -0.63
SPG7-209ENST00000564047 P2RY10O00398 339 aa11.13□□□□□ -0.63
SPG7-209ENST00000564047 CASKO14936 926 aa11.13□□□□□ -0.63
SPG7-209ENST00000564047 SMPD2O60906 423 aa11.13□□□□□ -0.63
SPG7-209ENST00000564047 NGFP01138 241 aa11.13□□□□□ -0.63
SPG7-209ENST00000564047 HLA-DPB1P04440 258 aa11.13□□□□□ -0.63
SPG7-209ENST00000564047 CFL1P23528 166 aaKnown RBP11.13□□□□□ -0.63
SPG7-209ENST00000564047 CALCRP30988 508 aa11.13□□□□□ -0.63
SPG7-209ENST00000564047 UCP2P55851 309 aa11.13□□□□□ -0.63
SPG7-209ENST00000564047 RPS11P62280 158 aaKnown RBP eCLIP11.13□□□□□ -0.63
SPG7-209ENST00000564047 MALLQ13021 153 aa11.13□□□□□ -0.63
SPG7-209ENST00000564047 SNTB1Q13884 538 aaKnown RBP11.13□□□□□ -0.63
SPG7-209ENST00000564047 ODF4Q2M2E3 257 aa11.13□□□□□ -0.63
SPG7-209ENST00000564047 GLYATL3Q5SZD4 288 aa11.13□□□□□ -0.63
SPG7-209ENST00000564047 SP5Q6BEB4 398 aaPredicted RBP11.13□□□□□ -0.63
SPG7-209ENST00000564047 Q6ZSR3 168 aa11.13□□□□□ -0.63
SPG7-209ENST00000564047 RFPL4BQ6ZWI9 263 aa11.13□□□□□ -0.63
SPG7-209ENST00000564047 DOK3Q7L591 496 aa11.13□□□□□ -0.63
SPG7-209ENST00000564047 CCDC190Q86UF4 302 aa11.13□□□□□ -0.63
SPG7-209ENST00000564047 ZNF101Q8IZC7 436 aa11.13□□□□□ -0.63
SPG7-209ENST00000564047 RDH10Q8IZV5 341 aa11.13□□□□□ -0.63
SPG7-209ENST00000564047 PLPP7Q8NBV4 271 aa11.13□□□□□ -0.63
SPG7-209ENST00000564047 OR51E1Q8TCB6 317 aa11.13□□□□□ -0.63
SPG7-209ENST00000564047 RGP1Q92546 391 aaPredicted RBP11.13□□□□□ -0.63
SPG7-209ENST00000564047 AKAP1Q92667 903 aaKnown RBP eCLIP11.13□□□□□ -0.63
SPG7-209ENST00000564047 THRSPQ92748 146 aa11.13□□□□□ -0.63
SPG7-209ENST00000564047 ITFG2Q969R8 447 aa11.13□□□□□ -0.63
SPG7-209ENST00000564047 TMEM203Q969S6 136 aa11.13□□□□□ -0.63
SPG7-209ENST00000564047 SPSB4Q96A44 273 aa11.13□□□□□ -0.63
SPG7-209ENST00000564047 BCL2L14Q9BZR8 327 aa11.13□□□□□ -0.63
SPG7-209ENST00000564047 C6orf62Q9GZU0 229 aaPredicted RBP11.13□□□□□ -0.63
SPG7-209ENST00000564047 OPA3Q9H6K4 179 aa11.13□□□□□ -0.63
SPG7-209ENST00000564047 ESRP2Q9H6T0 727 aaKnown RBP11.13□□□□□ -0.63
SPG7-209ENST00000564047 RNF167Q9H6Y7 350 aa11.13□□□□□ -0.63
SPG7-209ENST00000564047 EXOSC4Q9NPD3 245 aaKnown RBP11.13□□□□□ -0.63
SPG7-209ENST00000564047 GPR84Q9NQS5 396 aa11.13□□□□□ -0.63
SPG7-209ENST00000564047 DAPK2Q9UIK4 370 aa11.13□□□□□ -0.63
SPG7-209ENST00000564047 STARD10Q9Y365 291 aa11.13□□□□□ -0.63
SPG7-209ENST00000564047 SPEF1Q9Y4P9 236 aa11.13□□□□□ -0.63
SPG7-209ENST00000564047 TRBV5-5A0A0J9YX44 114 aa11.12□□□□□ -0.63
SPG7-209ENST00000564047 TRDV1A0A1B0GX56 115 aa11.12□□□□□ -0.63
SPG7-209ENST00000564047 LOC390937A0A1W2PQ73 354 aa11.12□□□□□ -0.63
SPG7-209ENST00000564047 SYT7O43581 403 aa11.12□□□□□ -0.63
SPG7-209ENST00000564047 MTRF1O75570 445 aaKnown RBP11.12□□□□□ -0.63
SPG7-209ENST00000564047 UPK1BO75841 260 aa11.12□□□□□ -0.63
SPG7-209ENST00000564047 SC5DO75845 299 aa11.12□□□□□ -0.63
SPG7-209ENST00000564047 GATBO75879 557 aaKnown RBP11.12□□□□□ -0.63
SPG7-209ENST00000564047 RGS9O75916 674 aaPredicted RBP11.12□□□□□ -0.63
SPG7-209ENST00000564047 FAM157BP0CG42 384 aa11.12□□□□□ -0.63
SPG7-209ENST00000564047 IGFBP2P18065 325 aa11.12□□□□□ -0.63
SPG7-209ENST00000564047 FGF9P31371 208 aaPredicted RBP11.12□□□□□ -0.63
SPG7-209ENST00000564047 KIR2DL3P43628 341 aa11.12□□□□□ -0.63
SPG7-209ENST00000564047 RORCP51449 518 aa11.12□□□□□ -0.63
SPG7-209ENST00000564047 FABP5Q01469 135 aa11.12□□□□□ -0.63
SPG7-209ENST00000564047 ACSM3Q53FZ2 586 aa11.12□□□□□ -0.63
SPG7-209ENST00000564047 BEX5Q5H9J7 111 aa11.12□□□□□ -0.63
SPG7-209ENST00000564047 NCMAPQ5T1S8 102 aa11.12□□□□□ -0.63
SPG7-209ENST00000564047 UNQ9370/PRO34162Q6UXP9 181 aa11.12□□□□□ -0.63
SPG7-209ENST00000564047 COMMD2Q86X83 199 aa11.12□□□□□ -0.63
SPG7-209ENST00000564047 DMRTC2Q8IXT2 367 aaPredicted RBP11.12□□□□□ -0.63
SPG7-209ENST00000564047 REEP6Q96HR9 211 aa11.12□□□□□ -0.63
SPG7-209ENST00000564047 LYZL4Q96KX0 146 aa11.12□□□□□ -0.63
SPG7-209ENST00000564047 WDFY2Q96P53 400 aa11.12□□□□□ -0.63
SPG7-209ENST00000564047 SMURF1Q9HCE7 757 aa11.12□□□□□ -0.63
SPG7-209ENST00000564047 TXNL4BQ9NX01 149 aaKnown RBP11.12□□□□□ -0.63
SPG7-209ENST00000564047 DNHD1Q96M86 4753 aa11.12□□□□□ -0.63
SPG7-209ENST00000564047 SPG11Q96JI7 2443 aa11.11□□□□□ -0.63
SPG7-209ENST00000564047 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.11□□□□□ -0.63
SPG7-209ENST00000564047 C19orf84I3L1E1 186 aa11.11□□□□□ -0.63
SPG7-209ENST00000564047 GABRPO00591 440 aa11.11□□□□□ -0.63
SPG7-209ENST00000564047 MAGEB3O15480 346 aa11.11□□□□□ -0.63
SPG7-209ENST00000564047 BCAP31P51572 246 aa11.11□□□□□ -0.63
SPG7-209ENST00000564047 PPP1CBP62140 327 aa11.11□□□□□ -0.63
SPG7-209ENST00000564047 NKX6-1P78426 367 aaPredicted RBP11.11□□□□□ -0.63
SPG7-209ENST00000564047 IFITM3Q01628 133 aa11.11□□□□□ -0.63
SPG7-209ENST00000564047 ZNF92Q03936 586 aa11.11□□□□□ -0.63
SPG7-209ENST00000564047 BSPH1Q075Z2 132 aa11.11□□□□□ -0.63
SPG7-209ENST00000564047 GFOD2Q3B7J2 385 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 107.7 ms