RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 ARHGEF17Q96PE2 2063 aaPredicted RBP6.71□□□□□ -1.34
HDAC3-216ENST00000523088 DSPP15924 2871 aaKnown RBP6.71□□□□□ -1.34
HDAC3-216ENST00000523088 UNC13CQ8NB66 2214 aa6.7□□□□□ -1.34
HDAC3-216ENST00000523088 PTPRQQ9UMZ3 2332 aa6.7□□□□□ -1.34
HDAC3-216ENST00000523088 LOC102723996A0A087X1L8 192 aa6.7□□□□□ -1.34
HDAC3-216ENST00000523088 A0A1W2PP18 115 aa6.7□□□□□ -1.34
HDAC3-216ENST00000523088 EFCAB9A8MZ26 197 aa6.7□□□□□ -1.34
HDAC3-216ENST00000523088 C17orf105B2RV13 164 aa6.7□□□□□ -1.34
HDAC3-216ENST00000523088 SHISA8B8ZZ34 492 aa6.7□□□□□ -1.34
HDAC3-216ENST00000523088 PEX12O00623 359 aa6.7□□□□□ -1.34
HDAC3-216ENST00000523088 TNFRSF10CO14798 259 aa6.7□□□□□ -1.34
HDAC3-216ENST00000523088 PPP1R2P9O14990 202 aa6.7□□□□□ -1.34
HDAC3-216ENST00000523088 NDUFS4O43181 175 aa6.7□□□□□ -1.34
HDAC3-216ENST00000523088 SEMA7AO75326 666 aa6.7□□□□□ -1.34
HDAC3-216ENST00000523088 NME6O75414 186 aaPredicted RBP6.7□□□□□ -1.34
HDAC3-216ENST00000523088 CLEC3AO75596 197 aa6.7□□□□□ -1.34
HDAC3-216ENST00000523088 CEACAM4O75871 244 aa6.7□□□□□ -1.34
HDAC3-216ENST00000523088 CNIH1O95406 144 aa6.7□□□□□ -1.34
HDAC3-216ENST00000523088 MT-CO3P00414 261 aa6.7□□□□□ -1.34
HDAC3-216ENST00000523088 PMP2P02689 132 aa6.7□□□□□ -1.34
HDAC3-216ENST00000523088 BCHEP06276 602 aa6.7□□□□□ -1.34
HDAC3-216ENST00000523088 SFTPBP07988 381 aa6.7□□□□□ -1.34
HDAC3-216ENST00000523088 CTSEP14091 401 aa6.7□□□□□ -1.34
HDAC3-216ENST00000523088 RAB5AP20339 215 aa6.7□□□□□ -1.34
HDAC3-216ENST00000523088 GDF1P27539 372 aa6.7□□□□□ -1.34
HDAC3-216ENST00000523088 FCGR2BP31994 310 aaPredicted RBP6.7□□□□□ -1.34
HDAC3-216ENST00000523088 CCKARP32238 428 aa6.7□□□□□ -1.34
HDAC3-216ENST00000523088 BCL6P41182 706 aa6.7□□□□□ -1.34
HDAC3-216ENST00000523088 IDH3AP50213 366 aa6.7□□□□□ -1.34
HDAC3-216ENST00000523088 RRADP55042 308 aa6.7□□□□□ -1.34
HDAC3-216ENST00000523088 PCBP4P57723 403 aaKnown RBP6.7□□□□□ -1.34
HDAC3-216ENST00000523088 SRSF2Q01130 221 aaKnown RBP6.7□□□□□ -1.34
HDAC3-216ENST00000523088 MGAT2Q10469 447 aa6.7□□□□□ -1.34
HDAC3-216ENST00000523088 ZP4Q12836 540 aa6.7□□□□□ -1.34
HDAC3-216ENST00000523088 DOC2BQ14184 412 aa6.7□□□□□ -1.34
HDAC3-216ENST00000523088 UNC50Q53HI1 259 aa6.7□□□□□ -1.34
HDAC3-216ENST00000523088 RAB6CQ53S08 254 aa6.7□□□□□ -1.34
HDAC3-216ENST00000523088 TMEM128Q5BJH2 165 aa6.7□□□□□ -1.34
HDAC3-216ENST00000523088 PRRT3Q5FWE3 981 aa6.7□□□□□ -1.34
HDAC3-216ENST00000523088 METRNLQ641Q3 311 aa6.7□□□□□ -1.34
HDAC3-216ENST00000523088 FAM71F2Q6NXP2 309 aa6.7□□□□□ -1.34
HDAC3-216ENST00000523088 LCTLQ6UWM7 567 aa6.7□□□□□ -1.34
HDAC3-216ENST00000523088 TMPRSS11AQ6ZMR5 421 aa6.7□□□□□ -1.34
HDAC3-216ENST00000523088 UEVLDQ8IX04 471 aa6.7□□□□□ -1.34
HDAC3-216ENST00000523088 ACOT4Q8N9L9 421 aa6.7□□□□□ -1.34
HDAC3-216ENST00000523088 CDRT4Q8N9R6 151 aa6.7□□□□□ -1.34
HDAC3-216ENST00000523088 SLC16A11Q8NCK7 471 aa6.7□□□□□ -1.34
HDAC3-216ENST00000523088 C2CD4AQ8NCU7 369 aaPredicted RBP6.7□□□□□ -1.34
HDAC3-216ENST00000523088 BEST4Q8NFU0 473 aa6.7□□□□□ -1.34
HDAC3-216ENST00000523088 OR1P1Q8NH06 330 aa6.7□□□□□ -1.34
HDAC3-216ENST00000523088 LMX1AQ8TE12 382 aa6.7□□□□□ -1.34
HDAC3-216ENST00000523088 TFB1MQ8WVM0 346 aaKnown RBP6.7□□□□□ -1.34
HDAC3-216ENST00000523088 RGMAQ96B86 450 aa6.7□□□□□ -1.34
HDAC3-216ENST00000523088 SNX22Q96L94 193 aa6.7□□□□□ -1.34
HDAC3-216ENST00000523088 TEX37Q96LM6 180 aa6.7□□□□□ -1.34
HDAC3-216ENST00000523088 WDR92Q96MX6 357 aa6.7□□□□□ -1.34
HDAC3-216ENST00000523088 ZNF670Q9BS34 389 aa6.7□□□□□ -1.34
HDAC3-216ENST00000523088 SLC39A8Q9C0K1 460 aa6.7□□□□□ -1.34
HDAC3-216ENST00000523088 OR2J1Q9GZK6 312 aa6.7□□□□□ -1.34
HDAC3-216ENST00000523088 OR8D2Q9GZM6 311 aa6.7□□□□□ -1.34
HDAC3-216ENST00000523088 RAB6CQ9H0N0 254 aa6.7□□□□□ -1.34
HDAC3-216ENST00000523088 MED28Q9H204 178 aa6.7□□□□□ -1.34
HDAC3-216ENST00000523088 CXorf36Q9H7Y0 433 aa6.7□□□□□ -1.34
HDAC3-216ENST00000523088 LRRC4CQ9HCJ2 640 aa6.7□□□□□ -1.34
HDAC3-216ENST00000523088 GCM1Q9NP62 436 aa6.7□□□□□ -1.34
HDAC3-216ENST00000523088 SEMA4BQ9NPR2 832 aaPredicted RBP6.7□□□□□ -1.34
HDAC3-216ENST00000523088 SLC17A5Q9NRA2 495 aa6.7□□□□□ -1.34
HDAC3-216ENST00000523088 COMMD3Q9UBI1 195 aa6.7□□□□□ -1.34
HDAC3-216ENST00000523088 RAB22AQ9UL26 194 aa6.7□□□□□ -1.34
HDAC3-216ENST00000523088 RAXQ9Y2V3 346 aa6.7□□□□□ -1.34
HDAC3-216ENST00000523088 AK6Q9Y3D8 172 aaKnown RBP6.7□□□□□ -1.34
HDAC3-216ENST00000523088 CDH10Q9Y6N8 788 aa6.7□□□□□ -1.34
HDAC3-216ENST00000523088 ZFYVE26Q68DK2 2539 aa6.7□□□□□ -1.34
HDAC3-216ENST00000523088 MEIKINA0A087WXM9 373 aa6.69□□□□□ -1.34
HDAC3-216ENST00000523088 A0A1W2PPE3 182 aa6.69□□□□□ -1.34
HDAC3-216ENST00000523088 PSMB11A5LHX3 300 aa6.69□□□□□ -1.34
HDAC3-216ENST00000523088 IFITM10A6NMD0 228 aa6.69□□□□□ -1.34
HDAC3-216ENST00000523088 ZNF726A6NNF4 738 aa6.69□□□□□ -1.34
HDAC3-216ENST00000523088 J3KR12 359 aa6.69□□□□□ -1.34
HDAC3-216ENST00000523088 MANBAO00462 879 aa6.69□□□□□ -1.34
HDAC3-216ENST00000523088 TYROBPO43914 113 aa6.69□□□□□ -1.34
HDAC3-216ENST00000523088 NRP2O60462 931 aa6.69□□□□□ -1.34
HDAC3-216ENST00000523088 SLC19A2O60779 497 aa6.69□□□□□ -1.34
HDAC3-216ENST00000523088 RAB36O95755 333 aa6.69□□□□□ -1.34
HDAC3-216ENST00000523088 CLIC3O95833 236 aa6.69□□□□□ -1.34
HDAC3-216ENST00000523088 TNFP01375 233 aa6.69□□□□□ -1.34
HDAC3-216ENST00000523088 CD74P04233 296 aa6.69□□□□□ -1.34
HDAC3-216ENST00000523088 SERPINA7P05543 415 aa6.69□□□□□ -1.34
HDAC3-216ENST00000523088 CELA3AP09093 270 aa6.69□□□□□ -1.34
HDAC3-216ENST00000523088 MPC1LP0DKB6 136 aa6.69□□□□□ -1.34
HDAC3-216ENST00000523088 RAP2AP10114 183 aa6.69□□□□□ -1.34
HDAC3-216ENST00000523088 IL1RNP18510 177 aa6.69□□□□□ -1.34
HDAC3-216ENST00000523088 GKP32189 559 aa6.69□□□□□ -1.34
HDAC3-216ENST00000523088 CSF2RBP32927 897 aa6.69□□□□□ -1.34
HDAC3-216ENST00000523088 CNN1P51911 297 aaKnown RBP6.69□□□□□ -1.34
HDAC3-216ENST00000523088 GP2P55259 537 aaKnown RBP6.69□□□□□ -1.34
HDAC3-216ENST00000523088 CTBP2P56545 445 aa6.69□□□□□ -1.34
HDAC3-216ENST00000523088 RPS27AP62979 156 aaKnown RBP6.69□□□□□ -1.34
HDAC3-216ENST00000523088 LCN2P80188 198 aa6.69□□□□□ -1.34
HDAC3-216ENST00000523088 PRR5P85299 388 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms