RNA–Protein interactions for RNA: ENST00000495100.1

GPC1-209, Transcript of glypican 1, humanhuman

TSL 1 (best)

Gene GPC1, Length 3,525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-209ENST00000495100 OR8B12Q8NGG6 310 aa11.94□□□□□ -0.5
GPC1-209ENST00000495100 OR5L2Q8NGL0 311 aa11.94□□□□□ -0.5
GPC1-209ENST00000495100 MCHR2Q969V1 340 aa11.94□□□□□ -0.5
GPC1-209ENST00000495100 PRRT1Q99946 306 aa11.94□□□□□ -0.5
GPC1-209ENST00000495100 URM1Q9BTM9 101 aaKnown RBP11.94□□□□□ -0.5
GPC1-209ENST00000495100 FAM86C1Q9NVL1 165 aa11.94□□□□□ -0.5
GPC1-209ENST00000495100 KIAA1549LQ6ZVL6 1849 aa11.93□□□□□ -0.5
GPC1-209ENST00000495100 EPHA1P21709 976 aa11.93□□□□□ -0.5
GPC1-209ENST00000495100 PPT1P50897 306 aa11.93□□□□□ -0.5
GPC1-209ENST00000495100 GGTLC2Q14390 218 aa11.93□□□□□ -0.5
GPC1-209ENST00000495100 TCEAL6Q6IPX3 200 aa11.93□□□□□ -0.5
GPC1-209ENST00000495100 OGFOD3Q6PK18 319 aa11.93□□□□□ -0.5
GPC1-209ENST00000495100 SEMA6DQ8NFY4 1073 aa11.93□□□□□ -0.5
GPC1-209ENST00000495100 SLC22A8Q8TCC7 542 aa11.93□□□□□ -0.5
GPC1-209ENST00000495100 HOXB13Q92826 284 aaPredicted RBP11.93□□□□□ -0.5
GPC1-209ENST00000495100 TCEAL3Q969E4 200 aa11.93□□□□□ -0.5
GPC1-209ENST00000495100 SLAMF9Q96A28 289 aa11.93□□□□□ -0.5
GPC1-209ENST00000495100 ZNF319Q9P2F9 582 aa11.93□□□□□ -0.5
GPC1-209ENST00000495100 PLSCR5A0PG75 271 aa11.93□□□□□ -0.5
GPC1-209ENST00000495100 A6NIZ1 184 aa11.93□□□□□ -0.5
GPC1-209ENST00000495100 C9J4A7 227 aa11.93□□□□□ -0.5
GPC1-209ENST00000495100 ATG12O94817 140 aa11.93□□□□□ -0.5
GPC1-209ENST00000495100 PMS2P2O95744 297 aa11.93□□□□□ -0.5
GPC1-209ENST00000495100 IGKV3-11P04433 115 aa11.93□□□□□ -0.5
GPC1-209ENST00000495100 HOXC4P09017 264 aaPredicted RBP11.93□□□□□ -0.5
GPC1-209ENST00000495100 NXPH1P58417 271 aa11.93□□□□□ -0.5
GPC1-209ENST00000495100 RAP1BP61224 184 aa11.93□□□□□ -0.5
GPC1-209ENST00000495100 RAP1AP62834 184 aa11.93□□□□□ -0.5
GPC1-209ENST00000495100 CLINT1Q14677 625 aa11.93□□□□□ -0.5
GPC1-209ENST00000495100 LYSMD4Q5XG99 296 aa11.93□□□□□ -0.5
GPC1-209ENST00000495100 PRSS42Q7Z5A4 293 aa11.93□□□□□ -0.5
GPC1-209ENST00000495100 ANKRD37Q7Z713 158 aa11.93□□□□□ -0.5
GPC1-209ENST00000495100 LRRC75AQ8NAA5 344 aa11.93□□□□□ -0.5
GPC1-209ENST00000495100 NUBPLQ8TB37 319 aa11.93□□□□□ -0.5
GPC1-209ENST00000495100 IL1F10Q8WWZ1 152 aa11.93□□□□□ -0.5
GPC1-209ENST00000495100 DMRTA2Q96SC8 542 aa11.93□□□□□ -0.5
GPC1-209ENST00000495100 ZNF700Q9H0M5 742 aa11.93□□□□□ -0.5
GPC1-209ENST00000495100 PCDHB10Q9UN67 800 aa11.93□□□□□ -0.5
GPC1-209ENST00000495100 C14orf166Q9Y224 244 aaKnown RBP11.93□□□□□ -0.5
GPC1-209ENST00000495100 RPS10-NUDT3A0A1W2PQS6 291 aa11.93□□□□□ -0.5
GPC1-209ENST00000495100 FAM74A7A6NL05 159 aa11.93□□□□□ -0.5
GPC1-209ENST00000495100 GSTZ1O43708 216 aaPredicted RBP11.93□□□□□ -0.5
GPC1-209ENST00000495100 SSX5O60225 188 aa11.93□□□□□ -0.5
GPC1-209ENST00000495100 CAV2P51636 162 aa11.93□□□□□ -0.5
GPC1-209ENST00000495100 SMCO1Q147U7 214 aa11.93□□□□□ -0.5
GPC1-209ENST00000495100 IAH1Q2TAA2 248 aaPredicted RBP11.93□□□□□ -0.5
GPC1-209ENST00000495100 FAM74A3Q4VXF1 159 aa11.93□□□□□ -0.5
GPC1-209ENST00000495100 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.93□□□□□ -0.5
GPC1-209ENST00000495100 FAAP24Q9BTP7 215 aa11.93□□□□□ -0.5
GPC1-209ENST00000495100 EVA1AQ9H8M9 152 aa11.93□□□□□ -0.5
GPC1-209ENST00000495100 ZNF275Q9NSD4 429 aaPredicted RBP11.93□□□□□ -0.5
GPC1-209ENST00000495100 MYOTQ9UBF9 498 aa11.93□□□□□ -0.5
GPC1-209ENST00000495100 CUL9Q8IWT3 2517 aa11.92□□□□□ -0.5
GPC1-209ENST00000495100 DCAF7P61962 342 aa11.92□□□□□ -0.5
GPC1-209ENST00000495100 ZNF660Q6AZW8 331 aaPredicted RBP11.92□□□□□ -0.5
GPC1-209ENST00000495100 OR2W3Q7Z3T1 314 aa11.92□□□□□ -0.5
GPC1-209ENST00000495100 SLC51BQ86UW2 128 aa11.92□□□□□ -0.5
GPC1-209ENST00000495100 CATSPERDQ86XM0 798 aa11.92□□□□□ -0.5
GPC1-209ENST00000495100 CDH26Q8IXH8 852 aa11.92□□□□□ -0.5
GPC1-209ENST00000495100 TMEM217Q8N7C4 229 aa11.92□□□□□ -0.5
GPC1-209ENST00000495100 BPIFCQ8NFQ6 507 aa11.92□□□□□ -0.5
GPC1-209ENST00000495100 PHYHIPQ92561 330 aa11.92□□□□□ -0.5
GPC1-209ENST00000495100 PHF7Q9BWX1 381 aaPredicted RBP11.92□□□□□ -0.5
GPC1-209ENST00000495100 MFRPQ9BY79 579 aa11.92□□□□□ -0.5
GPC1-209ENST00000495100 EIF5A2Q9GZV4 153 aaKnown RBP11.92□□□□□ -0.5
GPC1-209ENST00000495100 PRMT8Q9NR22 394 aaPredicted RBP11.92□□□□□ -0.5
GPC1-209ENST00000495100 SIT1Q9Y3P8 196 aa11.92□□□□□ -0.5
GPC1-209ENST00000495100 DOCK11Q5JSL3 2073 aa11.92□□□□□ -0.5
GPC1-209ENST00000495100 A0A1W2PR80 420 aa11.92□□□□□ -0.5
GPC1-209ENST00000495100 FAM166BA8MTA8 275 aa11.92□□□□□ -0.5
GPC1-209ENST00000495100 TSPAN2O60636 221 aa11.92□□□□□ -0.5
GPC1-209ENST00000495100 MED6O75586 246 aa11.92□□□□□ -0.5
GPC1-209ENST00000495100 PRKACAP17612 351 aa11.92□□□□□ -0.5
GPC1-209ENST00000495100 IL32P24001 234 aa11.92□□□□□ -0.5
GPC1-209ENST00000495100 HTR5AP47898 357 aa11.92□□□□□ -0.5
GPC1-209ENST00000495100 MFSD13AQ14CX5 517 aa11.92□□□□□ -0.5
GPC1-209ENST00000495100 MYPOPQ86VE0 399 aaPredicted RBP11.92□□□□□ -0.5
GPC1-209ENST00000495100 TDHQ8IZJ6 230 aa11.92□□□□□ -0.5
GPC1-209ENST00000495100 ADAM19Q9H013 955 aa11.92□□□□□ -0.5
GPC1-209ENST00000495100 MAGT1Q9H0U3 335 aa11.92□□□□□ -0.5
GPC1-209ENST00000495100 PISDQ9UG56 409 aa11.92□□□□□ -0.5
GPC1-209ENST00000495100 RAB22AQ9UL26 194 aa11.92□□□□□ -0.5
GPC1-209ENST00000495100 TRAV39A0A0B4J263 110 aa11.91□□□□□ -0.5
GPC1-209ENST00000495100 TRBV5-5A0A0J9YX44 114 aa11.91□□□□□ -0.5
GPC1-209ENST00000495100 LILRA5A6NI73 299 aa11.91□□□□□ -0.5
GPC1-209ENST00000495100 D6RAR5 112 aa11.91□□□□□ -0.5
GPC1-209ENST00000495100 TP53I11O14683 189 aa11.91□□□□□ -0.5
GPC1-209ENST00000495100 CXCL13O43927 109 aa11.91□□□□□ -0.5
GPC1-209ENST00000495100 CCL3P10147 92 aa11.91□□□□□ -0.5
GPC1-209ENST00000495100 RCC1P18754 421 aaPredicted RBP11.91□□□□□ -0.5
GPC1-209ENST00000495100 IGFBP7Q16270 282 aa11.91□□□□□ -0.5
GPC1-209ENST00000495100 MICBQ29980 383 aa11.91□□□□□ -0.5
GPC1-209ENST00000495100 EMC4Q5J8M3 183 aa11.91□□□□□ -0.5
GPC1-209ENST00000495100 KRBOX4Q5JUW0 171 aa11.91□□□□□ -0.5
GPC1-209ENST00000495100 MAFAQ8NHW3 353 aaPredicted RBP11.91□□□□□ -0.5
GPC1-209ENST00000495100 PNPLA2Q96AD5 504 aa11.91□□□□□ -0.5
GPC1-209ENST00000495100 ZNF2Q9BSG1 426 aaPredicted RBP11.91□□□□□ -0.5
GPC1-209ENST00000495100 ZNF581Q9P0T4 197 aa11.91□□□□□ -0.5
GPC1-209ENST00000495100 CLPSP04118 112 aa11.91□□□□□ -0.5
GPC1-209ENST00000495100 UBCP0CG48 685 aaKnown RBP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms