RNA–Protein interactions for RNA: ENST00000494956.1

NELFE-213, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-213ENST00000494956 TIGD6Q17RP2 521 aa8.85□□□□□ -0.99
NELFE-213ENST00000494956 ARMCX4Q5H9R4 360 aa8.85□□□□□ -0.99
NELFE-213ENST00000494956 DMRTC1Q5HYR2 192 aa8.85□□□□□ -0.99
NELFE-213ENST00000494956 ZNF841Q6ZN19 808 aa8.85□□□□□ -0.99
NELFE-213ENST00000494956 AMIGO2Q86SJ2 522 aa8.85□□□□□ -0.99
NELFE-213ENST00000494956 C11orf53Q8IXP5 236 aa8.85□□□□□ -0.99
NELFE-213ENST00000494956 CELF2-AS1Q8N7Q2 184 aa8.85□□□□□ -0.99
NELFE-213ENST00000494956 SIGLECL1Q8N7X8 197 aa8.85□□□□□ -0.99
NELFE-213ENST00000494956 ZDHHC22Q8N966 263 aa8.85□□□□□ -0.99
NELFE-213ENST00000494956 OR11L1Q8NGX0 322 aa8.85□□□□□ -0.99
NELFE-213ENST00000494956 OTOSQ8NHW6 89 aa8.85□□□□□ -0.99
NELFE-213ENST00000494956 Q8TCH9 128 aa8.85□□□□□ -0.99
NELFE-213ENST00000494956 TAF15Q92804 592 aaKnown RBP eCLIP8.85□□□□□ -0.99
NELFE-213ENST00000494956 POP5Q969H6 163 aaKnown RBP8.85□□□□□ -0.99
NELFE-213ENST00000494956 UTP4Q969X6 686 aaKnown RBP8.85□□□□□ -0.99
NELFE-213ENST00000494956 NEIL1Q96FI4 390 aaPredicted RBP8.85□□□□□ -0.99
NELFE-213ENST00000494956 LYZL4Q96KX0 146 aa8.85□□□□□ -0.99
NELFE-213ENST00000494956 ZNF48Q96MX3 618 aaPredicted RBP8.85□□□□□ -0.99
NELFE-213ENST00000494956 FGF23Q9GZV9 251 aaPredicted RBP8.85□□□□□ -0.99
NELFE-213ENST00000494956 MMADHCQ9H3L0 296 aaPredicted RBP8.85□□□□□ -0.99
NELFE-213ENST00000494956 MIOXQ9UGB7 285 aa8.85□□□□□ -0.99
NELFE-213ENST00000494956 OR5V1Q9UGF6 321 aa8.85□□□□□ -0.99
NELFE-213ENST00000494956 LRCH1Q9Y2L9 728 aa8.85□□□□□ -0.99
NELFE-213ENST00000494956 RHBDD3Q9Y3P4 386 aa8.85□□□□□ -0.99
NELFE-213ENST00000494956 IGHV2-70DA0A0C4DH43 119 aa8.84□□□□□ -0.99
NELFE-213ENST00000494956 MDFIC2A0A1B0GVS7 189 aa8.84□□□□□ -0.99
NELFE-213ENST00000494956 A0A1B0GW55 424 aa8.84□□□□□ -0.99
NELFE-213ENST00000494956 hCG_1807616A0A1W2PRN6 198 aa8.84□□□□□ -0.99
NELFE-213ENST00000494956 CCDC182A6NF36 153 aa8.84□□□□□ -0.99
NELFE-213ENST00000494956 C22orf46C9J442 243 aa8.84□□□□□ -0.99
NELFE-213ENST00000494956 PRKYO43930 277 aa8.84□□□□□ -0.99
NELFE-213ENST00000494956 GMDSO60547 372 aa8.84□□□□□ -0.99
NELFE-213ENST00000494956 GYPAP02724 150 aa8.84□□□□□ -0.99
NELFE-213ENST00000494956 TFF1P04155 84 aa8.84□□□□□ -0.99
NELFE-213ENST00000494956 LYNP07948 512 aa8.84□□□□□ -0.99
NELFE-213ENST00000494956 DUX4L2P0CJ85 424 aa8.84□□□□□ -0.99
NELFE-213ENST00000494956 DUX4L3P0CJ86 424 aa8.84□□□□□ -0.99
NELFE-213ENST00000494956 DUX4L4P0CJ87 422 aa8.84□□□□□ -0.99
NELFE-213ENST00000494956 DUX4L5P0CJ88 424 aa8.84□□□□□ -0.99
NELFE-213ENST00000494956 DUX4L6P0CJ89 424 aa8.84□□□□□ -0.99
NELFE-213ENST00000494956 DUX4L7P0CJ90 424 aa8.84□□□□□ -0.99
NELFE-213ENST00000494956 IRF2P14316 349 aa8.84□□□□□ -0.99
NELFE-213ENST00000494956 ACKR3P25106 362 aa8.84□□□□□ -0.99
NELFE-213ENST00000494956 GSK3AP49840 483 aa8.84□□□□□ -0.99
NELFE-213ENST00000494956 GMFBP60983 142 aa8.84□□□□□ -0.99
NELFE-213ENST00000494956 PAX8Q06710 450 aa8.84□□□□□ -0.99
NELFE-213ENST00000494956 SNAPC1Q16533 368 aa8.84□□□□□ -0.99
NELFE-213ENST00000494956 WDR25Q64LD2 544 aaPredicted RBP8.84□□□□□ -0.99
NELFE-213ENST00000494956 DUX4L9Q6RFH8 374 aaPredicted RBP8.84□□□□□ -0.99
NELFE-213ENST00000494956 DCDC5Q6ZRR9 648 aa8.84□□□□□ -0.99
NELFE-213ENST00000494956 SHFQ7M4L6 423 aa8.84□□□□□ -0.99
NELFE-213ENST00000494956 C1orf87Q8N0U7 546 aa8.84□□□□□ -0.99
NELFE-213ENST00000494956 BPIFB2Q8N4F0 458 aa8.84□□□□□ -0.99
NELFE-213ENST00000494956 GCSAMQ8N6F7 178 aa8.84□□□□□ -0.99
NELFE-213ENST00000494956 OR8B3Q8NGG8 313 aa8.84□□□□□ -0.99
NELFE-213ENST00000494956 PPP1R14AQ96A00 147 aa8.84□□□□□ -0.99
NELFE-213ENST00000494956 DACT3Q96B18 629 aaPredicted RBP8.84□□□□□ -0.99
NELFE-213ENST00000494956 PGAM5Q96HS1 289 aa8.84□□□□□ -0.99
NELFE-213ENST00000494956 PLEKHA8Q96JA3 519 aa8.84□□□□□ -0.99
NELFE-213ENST00000494956 OR8B2Q96RD0 313 aa8.84□□□□□ -0.99
NELFE-213ENST00000494956 MRI1Q9BV20 369 aa8.84□□□□□ -0.99
NELFE-213ENST00000494956 FN3KRPQ9HA64 309 aa8.84□□□□□ -0.99
NELFE-213ENST00000494956 SLC25A19Q9HC21 320 aa8.84□□□□□ -0.99
NELFE-213ENST00000494956 SMURF1Q9HCE7 757 aa8.84□□□□□ -0.99
NELFE-213ENST00000494956 PAPOLBQ9NRJ5 636 aaKnown RBP8.84□□□□□ -0.99
NELFE-213ENST00000494956 MRPL15Q9P015 296 aaKnown RBP8.84□□□□□ -0.99
NELFE-213ENST00000494956 KIF17Q9P2E2 1029 aa8.84□□□□□ -0.99
NELFE-213ENST00000494956 RNF7Q9UBF6 113 aa8.84□□□□□ -0.99
NELFE-213ENST00000494956 DUX4Q9UBX2 424 aa8.84□□□□□ -0.99
NELFE-213ENST00000494956 COPS3Q9UNS2 423 aa8.84□□□□□ -0.99
NELFE-213ENST00000494956 A0A0A6YYJ9 748 aa8.83□□□□□ -1
NELFE-213ENST00000494956 TRAV40A0A0B4J280 105 aa8.83□□□□□ -1
NELFE-213ENST00000494956 ANKRD30BLA7E2S9 258 aa8.83□□□□□ -1
NELFE-213ENST00000494956 LGALS8O00214 317 aa8.83□□□□□ -1
NELFE-213ENST00000494956 TNFRSF13BO14836 293 aaPredicted RBP8.83□□□□□ -1
NELFE-213ENST00000494956 MAGEB4O15481 346 aaPredicted RBP8.83□□□□□ -1
NELFE-213ENST00000494956 PRODHO43272 600 aa8.83□□□□□ -1
NELFE-213ENST00000494956 PTBP3O95758 552 aaKnown RBP8.83□□□□□ -1
NELFE-213ENST00000494956 HMGN1P05114 100 aa8.83□□□□□ -1
NELFE-213ENST00000494956 ALOX5APP20292 161 aa8.83□□□□□ -1
NELFE-213ENST00000494956 ACTG1P63261 375 aa8.83□□□□□ -1
NELFE-213ENST00000494956 PTGES3Q15185 160 aaKnown RBP8.83□□□□□ -1
NELFE-213ENST00000494956 FAHD1Q6P587 224 aa8.83□□□□□ -1
NELFE-213ENST00000494956 FAM90A1Q86YD7 464 aa8.83□□□□□ -1
NELFE-213ENST00000494956 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.83□□□□□ -1
NELFE-213ENST00000494956 OR1M1Q8NGA1 313 aa8.83□□□□□ -1
NELFE-213ENST00000494956 OR8B12Q8NGG6 310 aa8.83□□□□□ -1
NELFE-213ENST00000494956 OR8S1Q8NH09 359 aa8.83□□□□□ -1
NELFE-213ENST00000494956 OR5K1Q8NHB7 308 aa8.83□□□□□ -1
NELFE-213ENST00000494956 LRRC29Q8WV35 223 aa8.83□□□□□ -1
NELFE-213ENST00000494956 RAB40AQ8WXH6 277 aa8.83□□□□□ -1
NELFE-213ENST00000494956 C1orf147Q96MC9 270 aaPredicted RBP8.83□□□□□ -1
NELFE-213ENST00000494956 TECTBQ96PL2 329 aa8.83□□□□□ -1
NELFE-213ENST00000494956 NUDT16L1Q9BRJ7 211 aaKnown RBP8.83□□□□□ -1
NELFE-213ENST00000494956 PAPOLGQ9BWT3 736 aaKnown RBP8.83□□□□□ -1
NELFE-213ENST00000494956 SUCNR1Q9BXA5 334 aa8.83□□□□□ -1
NELFE-213ENST00000494956 SLC22A4Q9H015 551 aa8.83□□□□□ -1
NELFE-213ENST00000494956 OR10A2Q9H208 303 aa8.83□□□□□ -1
NELFE-213ENST00000494956 TOR3AQ9H497 397 aa8.83□□□□□ -1
NELFE-213ENST00000494956 YY1AP1Q9H869 796 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms