RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-218ENST00000493456 A0A1W2PRD5 423 aa14.44□□□□□ -0.1
NUP50-218ENST00000493456 A0A1W2PRF3 423 aa14.44□□□□□ -0.1
NUP50-218ENST00000493456 A0A1W2PRM7 423 aa14.44□□□□□ -0.1
NUP50-218ENST00000493456 UNC119BA6NIH7 251 aa14.44□□□□□ -0.1
NUP50-218ENST00000493456 HLA-DQA2P01906 255 aa14.44□□□□□ -0.1
NUP50-218ENST00000493456 TROVE2P10155 538 aaKnown RBP eCLIP14.44□□□□□ -0.1
NUP50-218ENST00000493456 OTX1P32242 354 aaPredicted RBP14.44□□□□□ -0.1
NUP50-218ENST00000493456 KLRD1Q13241 179 aa14.44□□□□□ -0.1
NUP50-218ENST00000493456 OXLD1Q5BKU9 147 aa14.44□□□□□ -0.1
NUP50-218ENST00000493456 VAX1Q5SQQ9 334 aa14.44□□□□□ -0.1
NUP50-218ENST00000493456 FAM216BQ8N7L0 139 aa14.44□□□□□ -0.1
NUP50-218ENST00000493456 OR56B2PQ8NGI1 322 aa14.44□□□□□ -0.1
NUP50-218ENST00000493456 OR4C15Q8NGM1 316 aa14.44□□□□□ -0.1
NUP50-218ENST00000493456 OR8S1Q8NH09 359 aa14.44□□□□□ -0.1
NUP50-218ENST00000493456 PPP1R35Q8TAP8 253 aa14.44□□□□□ -0.1
NUP50-218ENST00000493456 FANK1Q8TC84 345 aa14.44□□□□□ -0.1
NUP50-218ENST00000493456 LRRC29Q8WV35 223 aa14.44□□□□□ -0.1
NUP50-218ENST00000493456 MAP6Q96JE9 813 aa14.44□□□□□ -0.1
NUP50-218ENST00000493456 ATP6V1G3Q96LB4 118 aa14.44□□□□□ -0.1
NUP50-218ENST00000493456 TOR3AQ9H497 397 aa14.44□□□□□ -0.1
NUP50-218ENST00000493456 RPRD1BQ9NQG5 326 aaKnown RBP14.44□□□□□ -0.1
NUP50-218ENST00000493456 DNAJB11Q9UBS4 358 aa14.44□□□□□ -0.1
NUP50-218ENST00000493456 M0R1W7 72 aa14.43□□□□□ -0.1
NUP50-218ENST00000493456 ARPC3O15145 178 aa14.43□□□□□ -0.1
NUP50-218ENST00000493456 EDF1O60869 148 aaKnown RBP14.43□□□□□ -0.1
NUP50-218ENST00000493456 TIPRLO75663 272 aa14.43□□□□□ -0.1
NUP50-218ENST00000493456 DDOSTP39656 456 aa14.43□□□□□ -0.1
NUP50-218ENST00000493456 PRB3Q04118 309 aaPredicted RBP14.43□□□□□ -0.1
NUP50-218ENST00000493456 IKZF1Q13422 519 aa14.43□□□□□ -0.1
NUP50-218ENST00000493456 FGD3Q5JSP0 725 aa14.43□□□□□ -0.1
NUP50-218ENST00000493456 ARPINQ7Z6K5 226 aa14.43□□□□□ -0.1
NUP50-218ENST00000493456 CLPTM1LQ96KA5 538 aa14.43□□□□□ -0.1
NUP50-218ENST00000493456 DNTTIP1Q9H147 329 aa14.43□□□□□ -0.1
NUP50-218ENST00000493456 METTL8Q9H825 291 aaKnown RBP14.43□□□□□ -0.1
NUP50-218ENST00000493456 NOTCH3Q9UM47 2321 aa14.43□□□□□ -0.1
NUP50-218ENST00000493456 ANKRD30BLA7E2S9 258 aa14.42□□□□□ -0.1
NUP50-218ENST00000493456 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.42□□□□□ -0.1
NUP50-218ENST00000493456 CXCR6O00574 342 aa14.42□□□□□ -0.1
NUP50-218ENST00000493456 ACOT8O14734 319 aa14.42□□□□□ -0.1
NUP50-218ENST00000493456 HIST1H1CP16403 213 aaKnown RBP14.42□□□□□ -0.1
NUP50-218ENST00000493456 ZNF823P16415 610 aa14.42□□□□□ -0.1
NUP50-218ENST00000493456 SLC6A6P31641 620 aa14.42□□□□□ -0.1
NUP50-218ENST00000493456 NAA10P41227 235 aaPredicted RBP14.42□□□□□ -0.1
NUP50-218ENST00000493456 TGM4P49221 684 aa14.42□□□□□ -0.1
NUP50-218ENST00000493456 DLX1P56177 255 aa14.42□□□□□ -0.1
NUP50-218ENST00000493456 ELF3P78545 371 aaPredicted RBP14.42□□□□□ -0.1
NUP50-218ENST00000493456 KLF10Q13118 480 aa14.42□□□□□ -0.1
NUP50-218ENST00000493456 AANATQ16613 207 aa14.42□□□□□ -0.1
NUP50-218ENST00000493456 ATPAF1Q5TC12 328 aaPredicted RBP14.42□□□□□ -0.1
NUP50-218ENST00000493456 PGBD2Q6P3X8 592 aa14.42□□□□□ -0.1
NUP50-218ENST00000493456 WDR82Q6UXN9 313 aa14.42□□□□□ -0.1
NUP50-218ENST00000493456 DPY19L4Q7Z388 723 aa14.42□□□□□ -0.1
NUP50-218ENST00000493456 C11orf53Q8IXP5 236 aa14.42□□□□□ -0.1
NUP50-218ENST00000493456 LNX2Q8N448 690 aa14.42□□□□□ -0.1
NUP50-218ENST00000493456 PNKDQ8N490 385 aa14.42□□□□□ -0.1
NUP50-218ENST00000493456 OR1M1Q8NGA1 313 aa14.42□□□□□ -0.1
NUP50-218ENST00000493456 OR51G2Q8NGK0 314 aa14.42□□□□□ -0.1
NUP50-218ENST00000493456 SSX3Q99909 188 aa14.42□□□□□ -0.1
NUP50-218ENST00000493456 MRPL22Q9NWU5 206 aaKnown RBP14.42□□□□□ -0.1
NUP50-218ENST00000493456 FAM32AQ9Y421 112 aaKnown RBP14.42□□□□□ -0.1
NUP50-218ENST00000493456 XRCC2O43543 280 aa14.41□□□□□ -0.1
NUP50-218ENST00000493456 SERPINA1P01009 418 aa14.41□□□□□ -0.1
NUP50-218ENST00000493456 NOS3P29474 1203 aa14.41□□□□□ -0.1
NUP50-218ENST00000493456 EMX1Q04741 257 aaPredicted RBP14.41□□□□□ -0.1
NUP50-218ENST00000493456 BLMHQ13867 455 aa14.41□□□□□ -0.1
NUP50-218ENST00000493456 LRRC75BQ2VPJ9 315 aa14.41□□□□□ -0.1
NUP50-218ENST00000493456 STUMQ69YW2 141 aa14.41□□□□□ -0.1
NUP50-218ENST00000493456 LIAT1Q6ZQX7 453 aa14.41□□□□□ -0.1
NUP50-218ENST00000493456 WDR86Q86TI4 376 aa14.41□□□□□ -0.1
NUP50-218ENST00000493456 OR4F17Q8NGA8 305 aa14.41□□□□□ -0.1
NUP50-218ENST00000493456 OR4K13Q8NH42 304 aa14.41□□□□□ -0.1
NUP50-218ENST00000493456 H1FXQ92522 213 aaKnown RBP14.41□□□□□ -0.1
NUP50-218ENST00000493456 SPSB4Q96A44 273 aa14.41□□□□□ -0.1
NUP50-218ENST00000493456 PHF21AQ96BD5 680 aa14.41□□□□□ -0.1
NUP50-218ENST00000493456 OR4F4Q96R69 305 aa14.41□□□□□ -0.1
NUP50-218ENST00000493456 NPFFR1Q9GZQ6 430 aa14.41□□□□□ -0.1
NUP50-218ENST00000493456 OR52D1Q9H346 318 aa14.41□□□□□ -0.1
NUP50-218ENST00000493456 CMTM6Q9NX76 183 aa14.41□□□□□ -0.1
NUP50-218ENST00000493456 ADA2Q9NZK5 511 aa14.41□□□□□ -0.1
NUP50-218ENST00000493456 SF3B6Q9Y3B4 125 aaKnown RBP14.41□□□□□ -0.1
NUP50-218ENST00000493456 DNAH9Q9NYC9 4486 aa14.41□□□□□ -0.1
NUP50-218ENST00000493456 LOC100653049A0A140TA62 436 aa14.4□□□□□ -0.1
NUP50-218ENST00000493456 NKX6-3A6NJ46 265 aa14.4□□□□□ -0.1
NUP50-218ENST00000493456 GSTA4O15217 222 aa14.4□□□□□ -0.1
NUP50-218ENST00000493456 FBXO24O75426 580 aa14.4□□□□□ -0.1
NUP50-218ENST00000493456 KRT34O76011 436 aa14.4□□□□□ -0.1
NUP50-218ENST00000493456 VSIG10L2P0DP72 767 aa14.4□□□□□ -0.1
NUP50-218ENST00000493456 RHCEP18577 417 aa14.4□□□□□ -0.1
NUP50-218ENST00000493456 ANOS1P23352 680 aa14.4□□□□□ -0.1
NUP50-218ENST00000493456 SEC23BQ15437 767 aa14.4□□□□□ -0.1
NUP50-218ENST00000493456 LY6EQ16553 131 aa14.4□□□□□ -0.1
NUP50-218ENST00000493456 NSUN5P1Q3KNT7 163 aa14.4□□□□□ -0.1
NUP50-218ENST00000493456 CRIP3Q6Q6R5 217 aa14.4□□□□□ -0.1
NUP50-218ENST00000493456 SDR9C7Q8NEX9 313 aa14.4□□□□□ -0.1
NUP50-218ENST00000493456 OR9Q1Q8NGQ5 310 aa14.4□□□□□ -0.1
NUP50-218ENST00000493456 COPS4Q9BT78 406 aa14.4□□□□□ -0.1
NUP50-218ENST00000493456 IFT27Q9BW83 186 aa14.4□□□□□ -0.1
NUP50-218ENST00000493456 NSRP1Q9H0G5 558 aaKnown RBP14.4□□□□□ -0.1
NUP50-218ENST00000493456 FN3KQ9H479 309 aa14.4□□□□□ -0.1
NUP50-218ENST00000493456 CAPN7Q9Y6W3 813 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms