RNA–Protein interactions for RNA: ENST00000490476.1

SSX2IP-208, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 3

Gene SSX2IP, Length 716 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-208ENST00000490476 TGFBR3Q03167 851 aa3.49□□□□□ -1.85
SSX2IP-208ENST00000490476 SCRN3Q0VDG4 424 aa3.49□□□□□ -1.85
SSX2IP-208ENST00000490476 GGTLC2Q14390 218 aa3.49□□□□□ -1.85
SSX2IP-208ENST00000490476 TAF9Q16594 264 aa3.49□□□□□ -1.85
SSX2IP-208ENST00000490476 ZNF239Q16600 458 aaKnown RBP3.49□□□□□ -1.85
SSX2IP-208ENST00000490476 MICBQ29980 383 aa3.49□□□□□ -1.85
SSX2IP-208ENST00000490476 TIGD3Q6B0B8 471 aa3.49□□□□□ -1.85
SSX2IP-208ENST00000490476 LRRC74BQ6ZQY2 392 aa3.49□□□□□ -1.85
SSX2IP-208ENST00000490476 CLEC20AQ6ZU45 233 aa3.49□□□□□ -1.85
SSX2IP-208ENST00000490476 GDPD3Q7L5L3 318 aa3.49□□□□□ -1.85
SSX2IP-208ENST00000490476 ZNF740Q8NDX6 193 aa3.49□□□□□ -1.85
SSX2IP-208ENST00000490476 ZPLD1Q8TCW7 415 aa3.49□□□□□ -1.85
SSX2IP-208ENST00000490476 NUS1Q96E22 293 aa3.49□□□□□ -1.85
SSX2IP-208ENST00000490476 GSDMAQ96QA5 445 aa3.49□□□□□ -1.85
SSX2IP-208ENST00000490476 CNN2Q99439 309 aaKnown RBP3.49□□□□□ -1.85
SSX2IP-208ENST00000490476 EBF4Q9BQW3 602 aa3.49□□□□□ -1.85
SSX2IP-208ENST00000490476 POLR2J2Q9GZM3 115 aaKnown RBP3.49□□□□□ -1.85
SSX2IP-208ENST00000490476 POLR2J3Q9H1A7 115 aaKnown RBP3.49□□□□□ -1.85
SSX2IP-208ENST00000490476 ZNF226Q9NYT6 803 aa3.49□□□□□ -1.85
SSX2IP-208ENST00000490476 DCDC2Q9UHG0 476 aa3.49□□□□□ -1.85
SSX2IP-208ENST00000490476 GLS2Q9UI32 602 aa3.49□□□□□ -1.85
SSX2IP-208ENST00000490476 OR5B21A6NL26 309 aa3.48□□□□□ -1.85
SSX2IP-208ENST00000490476 ZFP92A6NM28 416 aa3.48□□□□□ -1.85
SSX2IP-208ENST00000490476 E7EQ34 232 aa3.48□□□□□ -1.85
SSX2IP-208ENST00000490476 E9PBE3 544 aa3.48□□□□□ -1.85
SSX2IP-208ENST00000490476 RNF13O43567 381 aa3.48□□□□□ -1.85
SSX2IP-208ENST00000490476 IGLV3-27P01718 113 aa3.48□□□□□ -1.85
SSX2IP-208ENST00000490476 IVLP07476 585 aa3.48□□□□□ -1.85
SSX2IP-208ENST00000490476 SLC2A5P22732 501 aa3.48□□□□□ -1.85
SSX2IP-208ENST00000490476 CXCR2P25025 360 aa3.48□□□□□ -1.85
SSX2IP-208ENST00000490476 RFC3P40938 356 aa3.48□□□□□ -1.85
SSX2IP-208ENST00000490476 NSG1P42857 185 aa3.48□□□□□ -1.85
SSX2IP-208ENST00000490476 KLK7P49862 253 aa3.48□□□□□ -1.85
SSX2IP-208ENST00000490476 UBE2IP63279 158 aaKnown RBP3.48□□□□□ -1.85
SSX2IP-208ENST00000490476 DCDP81605 110 aaKnown RBP3.48□□□□□ -1.85
SSX2IP-208ENST00000490476 EGFEM1PQ0D2K5 195 aa3.48□□□□□ -1.85
SSX2IP-208ENST00000490476 BST2Q10589 180 aaKnown RBP3.48□□□□□ -1.85
SSX2IP-208ENST00000490476 PPP1R7Q15435 360 aa3.48□□□□□ -1.85
SSX2IP-208ENST00000490476 NRF1Q16656 503 aa3.48□□□□□ -1.85
SSX2IP-208ENST00000490476 PARP15Q460N3 678 aa3.48□□□□□ -1.85
SSX2IP-208ENST00000490476 KLF17Q5JT82 389 aaPredicted RBP3.48□□□□□ -1.85
SSX2IP-208ENST00000490476 LCE1EQ5T753 118 aa3.48□□□□□ -1.85
SSX2IP-208ENST00000490476 LCE1FQ5T754 118 aa3.48□□□□□ -1.85
SSX2IP-208ENST00000490476 ARMC12Q5T9G4 340 aa3.48□□□□□ -1.85
SSX2IP-208ENST00000490476 PRAMEF20Q5VT98 475 aa3.48□□□□□ -1.85
SSX2IP-208ENST00000490476 CEND1Q8N111 149 aa3.48□□□□□ -1.85
SSX2IP-208ENST00000490476 LYG1Q8N1E2 194 aa3.48□□□□□ -1.85
SSX2IP-208ENST00000490476 BBS5Q8N3I7 341 aa3.48□□□□□ -1.85
SSX2IP-208ENST00000490476 OR2L3Q8NG85 312 aa3.48□□□□□ -1.85
SSX2IP-208ENST00000490476 OR2AP1Q8NGE2 309 aa3.48□□□□□ -1.85
SSX2IP-208ENST00000490476 OR6K2Q8NGY2 324 aa3.48□□□□□ -1.85
SSX2IP-208ENST00000490476 SMIM14Q96QK8 99 aa3.48□□□□□ -1.85
SSX2IP-208ENST00000490476 TSG101Q99816 390 aa3.48□□□□□ -1.85
SSX2IP-208ENST00000490476 UTP23Q9BRU9 249 aaKnown RBP3.48□□□□□ -1.85
SSX2IP-208ENST00000490476 CDC42EP4Q9H3Q1 356 aaKnown RBP3.48□□□□□ -1.85
SSX2IP-208ENST00000490476 NARFLQ9H6Q4 476 aa3.48□□□□□ -1.85
SSX2IP-208ENST00000490476 SH2D2AQ9NP31 389 aa3.48□□□□□ -1.85
SSX2IP-208ENST00000490476 NT5MQ9NPB1 228 aa3.48□□□□□ -1.85
SSX2IP-208ENST00000490476 FAM49BQ9NUQ9 324 aa3.48□□□□□ -1.85
SSX2IP-208ENST00000490476 ZNF629Q9UEG4 869 aaPredicted RBP3.48□□□□□ -1.85
SSX2IP-208ENST00000490476 BTNL2Q9UIR0 455 aa3.48□□□□□ -1.85
SSX2IP-208ENST00000490476 PEX16Q9Y5Y5 336 aa3.48□□□□□ -1.85
SSX2IP-208ENST00000490476 FSIP2Q5CZC0 6907 aa3.48□□□□□ -1.85
SSX2IP-208ENST00000490476 IGLV3-10A0A075B6K4 115 aa3.47□□□□□ -1.85
SSX2IP-208ENST00000490476 C5orf63A6NC05 138 aa3.47□□□□□ -1.85
SSX2IP-208ENST00000490476 OR5K4A6NMS3 321 aa3.47□□□□□ -1.85
SSX2IP-208ENST00000490476 E7EWF7 191 aa3.47□□□□□ -1.85
SSX2IP-208ENST00000490476 LOC110117498-PIK3R3F6TDL0 507 aa3.47□□□□□ -1.85
SSX2IP-208ENST00000490476 LSM1O15116 133 aaKnown RBP3.47□□□□□ -1.85
SSX2IP-208ENST00000490476 PSTPIP1O43586 416 aa3.47□□□□□ -1.85
SSX2IP-208ENST00000490476 UPK3AO75631 287 aa3.47□□□□□ -1.85
SSX2IP-208ENST00000490476 IGHV3-48P01763 117 aa3.47□□□□□ -1.85
SSX2IP-208ENST00000490476 SERPIND1P05546 499 aa3.47□□□□□ -1.85
SSX2IP-208ENST00000490476 SOD3P08294 240 aa3.47□□□□□ -1.85
SSX2IP-208ENST00000490476 TROVE2P10155 538 aaKnown RBP eCLIP3.47□□□□□ -1.85
SSX2IP-208ENST00000490476 STX17P56962 302 aa3.47□□□□□ -1.85
SSX2IP-208ENST00000490476 PLP1P60201 277 aa3.47□□□□□ -1.85
SSX2IP-208ENST00000490476 TNNC1P63316 161 aa3.47□□□□□ -1.85
SSX2IP-208ENST00000490476 TGM3Q08188 693 aa3.47□□□□□ -1.85
SSX2IP-208ENST00000490476 ARFRP1Q13795 201 aa3.47□□□□□ -1.85
SSX2IP-208ENST00000490476 TGFBIQ15582 683 aa3.47□□□□□ -1.85
SSX2IP-208ENST00000490476 ZNHIT3Q15649 155 aaPredicted RBP3.47□□□□□ -1.85
SSX2IP-208ENST00000490476 NKAIN1Q4KMZ8 207 aa3.47□□□□□ -1.85
SSX2IP-208ENST00000490476 C9orf129Q5T035 196 aaKnown RBP3.47□□□□□ -1.85
SSX2IP-208ENST00000490476 C1orf146Q5VVC0 180 aa3.47□□□□□ -1.85
SSX2IP-208ENST00000490476 SPINK14Q6IE38 97 aa3.47□□□□□ -1.85
SSX2IP-208ENST00000490476 SLC25A25Q6KCM7 469 aa3.47□□□□□ -1.85
SSX2IP-208ENST00000490476 TMEM107Q6UX40 140 aa3.47□□□□□ -1.85
SSX2IP-208ENST00000490476 PSTKQ8IV42 348 aaKnown RBP3.47□□□□□ -1.85
SSX2IP-208ENST00000490476 RDH10Q8IZV5 341 aa3.47□□□□□ -1.85
SSX2IP-208ENST00000490476 LINC00612Q8N6U2 182 aa3.47□□□□□ -1.85
SSX2IP-208ENST00000490476 TPRX1Q8N7U7 411 aa3.47□□□□□ -1.85
SSX2IP-208ENST00000490476 OR4F6Q8NGB9 312 aa3.47□□□□□ -1.85
SSX2IP-208ENST00000490476 OR52K2Q8NGK3 314 aa3.47□□□□□ -1.85
SSX2IP-208ENST00000490476 C10orf105Q8TEF2 133 aa3.47□□□□□ -1.85
SSX2IP-208ENST00000490476 C8orf44Q96CB5 159 aa3.47□□□□□ -1.85
SSX2IP-208ENST00000490476 C16orf74Q96GX8 76 aa3.47□□□□□ -1.85
SSX2IP-208ENST00000490476 MAGEB18Q96M61 343 aa3.47□□□□□ -1.85
SSX2IP-208ENST00000490476 CENPKQ9BS16 269 aa3.47□□□□□ -1.85
SSX2IP-208ENST00000490476 TNFRSF19Q9NS68 423 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms