RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 LOXHD1Q8IVV2 1947 aa0.48□□□□□ -2.33
CCDC93-209ENST00000488908 SSH2Q76I76 1423 aa0.47□□□□□ -2.33
CCDC93-209ENST00000488908 MROH5Q6ZUA9 1318 aa0.47□□□□□ -2.33
CCDC93-209ENST00000488908 ICE1Q9Y2F5 2266 aa0.47□□□□□ -2.33
CCDC93-209ENST00000488908 IGKV1-27A0A075B6S5 117 aa0.47□□□□□ -2.33
CCDC93-209ENST00000488908 H7C1H1 209 aa0.47□□□□□ -2.33
CCDC93-209ENST00000488908 K7EMT4 169 aa0.47□□□□□ -2.33
CCDC93-209ENST00000488908 NDUFAB1O14561 156 aa0.47□□□□□ -2.33
CCDC93-209ENST00000488908 CLDN11O75508 207 aa0.47□□□□□ -2.33
CCDC93-209ENST00000488908 FLOT1O75955 427 aa0.47□□□□□ -2.33
CCDC93-209ENST00000488908 LCA5LO95447 670 aa0.47□□□□□ -2.33
CCDC93-209ENST00000488908 SERPINA3P01011 423 aa0.47□□□□□ -2.33
CCDC93-209ENST00000488908 CST1P01037 141 aa0.47□□□□□ -2.33
CCDC93-209ENST00000488908 PTMAP06454 111 aaKnown RBP0.47□□□□□ -2.33
CCDC93-209ENST00000488908 ANXA5P08758 320 aa0.47□□□□□ -2.33
CCDC93-209ENST00000488908 SLC35G6P0C7Q6 338 aa0.47□□□□□ -2.33
CCDC93-209ENST00000488908 THRAP10827 490 aa0.47□□□□□ -2.33
CCDC93-209ENST00000488908 SLC2A3P11169 496 aa0.47□□□□□ -2.33
CCDC93-209ENST00000488908 NCF2P19878 526 aaPredicted RBP0.47□□□□□ -2.33
CCDC93-209ENST00000488908 EIF2S2P20042 333 aaKnown RBP0.47□□□□□ -2.33
CCDC93-209ENST00000488908 APLNRP35414 380 aa0.47□□□□□ -2.33
CCDC93-209ENST00000488908 LGALS7P47929 136 aa0.47□□□□□ -2.33
CCDC93-209ENST00000488908 ZNF83P51522 516 aa0.47□□□□□ -2.33
CCDC93-209ENST00000488908 NDUFA8P51970 172 aa0.47□□□□□ -2.33
CCDC93-209ENST00000488908 FOXA1P55317 472 aa0.47□□□□□ -2.33
CCDC93-209ENST00000488908 KLF3P57682 345 aaPredicted RBP0.47□□□□□ -2.33
CCDC93-209ENST00000488908 ZNF121P58317 390 aaPredicted RBP0.47□□□□□ -2.33
CCDC93-209ENST00000488908 PPP1CAP62136 330 aa0.47□□□□□ -2.33
CCDC93-209ENST00000488908 TRDNQ13061 729 aa0.47□□□□□ -2.33
CCDC93-209ENST00000488908 TRAM2Q15035 370 aa0.47□□□□□ -2.33
CCDC93-209ENST00000488908 SSX2Q16385 188 aa0.47□□□□□ -2.33
CCDC93-209ENST00000488908 ZNF829Q3KNS6 432 aaPredicted RBP0.47□□□□□ -2.33
CCDC93-209ENST00000488908 PDZD11Q5EBL8 140 aa0.47□□□□□ -2.33
CCDC93-209ENST00000488908 ZNF678Q5SXM1 525 aa0.47□□□□□ -2.33
CCDC93-209ENST00000488908 LDLRAD2Q5SZI1 272 aa0.47□□□□□ -2.33
CCDC93-209ENST00000488908 PRAMEF5Q5TYX0 476 aa0.47□□□□□ -2.33
CCDC93-209ENST00000488908 PRAMEF6Q5VXH4 476 aa0.47□□□□□ -2.33
CCDC93-209ENST00000488908 RNASEKQ6P5S7 137 aaKnown RBP0.47□□□□□ -2.33
CCDC93-209ENST00000488908 TTC23LQ6PF05 361 aa0.47□□□□□ -2.33
CCDC93-209ENST00000488908 UBE2J2Q8N2K1 259 aa0.47□□□□□ -2.33
CCDC93-209ENST00000488908 RNF10Q8N5U6 811 aaKnown RBP0.47□□□□□ -2.33
CCDC93-209ENST00000488908 DRAM1Q8N682 238 aa0.47□□□□□ -2.33
CCDC93-209ENST00000488908 NECAB1Q8N987 351 aa0.47□□□□□ -2.33
CCDC93-209ENST00000488908 OR4M2Q8NGB6 313 aa0.47□□□□□ -2.33
CCDC93-209ENST00000488908 NUBPLQ8TB37 319 aa0.47□□□□□ -2.33
CCDC93-209ENST00000488908 DCAKDQ8WVC6 231 aa0.47□□□□□ -2.33
CCDC93-209ENST00000488908 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP0.47□□□□□ -2.33
CCDC93-209ENST00000488908 CDS1Q92903 461 aa0.47□□□□□ -2.33
CCDC93-209ENST00000488908 C20orf166-AS1Q96NR2 134 aa0.47□□□□□ -2.33
CCDC93-209ENST00000488908 ZBTB18Q99592 522 aa0.47□□□□□ -2.33
CCDC93-209ENST00000488908 TEAD3Q99594 435 aa0.47□□□□□ -2.33
CCDC93-209ENST00000488908 HIGD2AQ9BW72 106 aa0.47□□□□□ -2.33
CCDC93-209ENST00000488908 OR51M1Q9H341 326 aa0.47□□□□□ -2.33
CCDC93-209ENST00000488908 DSN1Q9H410 356 aa0.47□□□□□ -2.33
CCDC93-209ENST00000488908 PLEKHF2Q9H8W4 249 aa0.47□□□□□ -2.33
CCDC93-209ENST00000488908 OR2S2Q9NQN1 319 aa0.47□□□□□ -2.33
CCDC93-209ENST00000488908 RGS18Q9NS28 235 aa0.47□□□□□ -2.33
CCDC93-209ENST00000488908 RAB22AQ9UL26 194 aa0.47□□□□□ -2.33
CCDC93-209ENST00000488908 CAB39Q9Y376 341 aaPredicted RBP0.47□□□□□ -2.33
CCDC93-209ENST00000488908 VWDEQ8N2E2 1590 aa0.47□□□□□ -2.33
CCDC93-209ENST00000488908 MUC5ACP98088 5654 aa0.47□□□□□ -2.33
CCDC93-209ENST00000488908 PCDH11XQ9BZA7 1347 aa0.46□□□□□ -2.34
CCDC93-209ENST00000488908 MYBPHLA2RUH7 354 aa0.46□□□□□ -2.34
CCDC93-209ENST00000488908 IZUMO1RA6ND01 250 aa0.46□□□□□ -2.34
CCDC93-209ENST00000488908 M0R1X1 148 aa0.46□□□□□ -2.34
CCDC93-209ENST00000488908 SLC31A1O15431 190 aa0.46□□□□□ -2.34
CCDC93-209ENST00000488908 NMT2O60551 498 aa0.46□□□□□ -2.34
CCDC93-209ENST00000488908 FGFR1OPO95684 399 aaKnown RBP0.46□□□□□ -2.34
CCDC93-209ENST00000488908 TGM6O95932 706 aa0.46□□□□□ -2.34
CCDC93-209ENST00000488908 IGHV3-53P01767 116 aa0.46□□□□□ -2.34
CCDC93-209ENST00000488908 HNRNPH3P31942 346 aaKnown RBP0.46□□□□□ -2.34
CCDC93-209ENST00000488908 OTX1P32242 354 aaPredicted RBP0.46□□□□□ -2.34
CCDC93-209ENST00000488908 CD70P32970 193 aa0.46□□□□□ -2.34
CCDC93-209ENST00000488908 GBX2P52951 348 aaPredicted RBP0.46□□□□□ -2.34
CCDC93-209ENST00000488908 RAB10P61026 200 aa0.46□□□□□ -2.34
CCDC93-209ENST00000488908 FMODQ06828 376 aa0.46□□□□□ -2.34
CCDC93-209ENST00000488908 TAF7Q15545 349 aaPredicted RBP0.46□□□□□ -2.34
CCDC93-209ENST00000488908 MAPRE2Q15555 327 aa0.46□□□□□ -2.34
CCDC93-209ENST00000488908 KRTAP25-1Q3LHN0 102 aa0.46□□□□□ -2.34
CCDC93-209ENST00000488908 LGALSLQ3ZCW2 172 aaPredicted RBP0.46□□□□□ -2.34
CCDC93-209ENST00000488908 LIN9Q5TKA1 542 aa0.46□□□□□ -2.34
CCDC93-209ENST00000488908 FA2HQ7L5A8 372 aa0.46□□□□□ -2.34
CCDC93-209ENST00000488908 CBLN2Q8IUK8 224 aa0.46□□□□□ -2.34
CCDC93-209ENST00000488908 CPNE9Q8IYJ1 553 aa0.46□□□□□ -2.34
CCDC93-209ENST00000488908 EIF4E3Q8N5X7 224 aaKnown RBP0.46□□□□□ -2.34
CCDC93-209ENST00000488908 EIF1ADQ8N9N8 165 aaKnown RBP0.46□□□□□ -2.34
CCDC93-209ENST00000488908 OR56B2PQ8NGI1 322 aa0.46□□□□□ -2.34
CCDC93-209ENST00000488908 OR8K3Q8NH51 312 aa0.46□□□□□ -2.34
CCDC93-209ENST00000488908 KIFAP3Q92845 792 aa0.46□□□□□ -2.34
CCDC93-209ENST00000488908 ECHDC3Q96DC8 303 aa0.46□□□□□ -2.34
CCDC93-209ENST00000488908 API5Q9BZZ5 524 aaKnown RBP0.46□□□□□ -2.34
CCDC93-209ENST00000488908 STX18Q9P2W9 335 aaKnown RBP0.46□□□□□ -2.34
CCDC93-209ENST00000488908 DDX19BQ9UMR2 479 aa0.46□□□□□ -2.34
CCDC93-209ENST00000488908 CSDC2Q9Y534 153 aaKnown RBP0.46□□□□□ -2.34
CCDC93-209ENST00000488908 DOCK6Q96HP0 2047 aa0.45□□□□□ -2.34
CCDC93-209ENST00000488908 SMCO3A2RU48 225 aa0.45□□□□□ -2.34
CCDC93-209ENST00000488908 SMCO2A6NFE2 343 aa0.45□□□□□ -2.34
CCDC93-209ENST00000488908 H3BQ85 93 aa0.45□□□□□ -2.34
CCDC93-209ENST00000488908 AP3B1O00203 1094 aa0.45□□□□□ -2.34
CCDC93-209ENST00000488908 CLOCKO15516 846 aa0.45□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms