RNA–Protein interactions for RNA: ENST00000487876.1

RPSA-208, Transcript of ribosomal protein SA, human

TSL 4

Gene RPSA, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPSA-208	ENST00000487876	OR8B12	Q8NGG6	310 aa		10.81	□□□□□ -0.68
RPSA-208	ENST00000487876	OR52H1	Q8NGJ2	320 aa		10.81	□□□□□ -0.68
RPSA-208	ENST00000487876	LYZL4	Q96KX0	146 aa		10.81	□□□□□ -0.68
RPSA-208	ENST00000487876	PKP2	Q99959	881 aa		10.81	□□□□□ -0.68
RPSA-208	ENST00000487876	TMEM246	Q9BRR3	403 aa		10.81	□□□□□ -0.68
RPSA-208	ENST00000487876	YIPF3	Q9GZM5	350 aa		10.81	□□□□□ -0.68
RPSA-208	ENST00000487876	SLC22A4	Q9H015	551 aa		10.81	□□□□□ -0.68
RPSA-208	ENST00000487876	OR10A2	Q9H208	303 aa		10.81	□□□□□ -0.68
RPSA-208	ENST00000487876	RIBC2	Q9H4K1	309 aa		10.81	□□□□□ -0.68
RPSA-208	ENST00000487876	MMP26	Q9NRE1	261 aa		10.81	□□□□□ -0.68
RPSA-208	ENST00000487876	OPN4	Q9UHM6	478 aa		10.81	□□□□□ -0.68
RPSA-208	ENST00000487876	TRAPPC2L	H3BP13	241 aa		10.8	□□□□□ -0.68
RPSA-208	ENST00000487876	PTBP3	O95758	552 aa	Known RBP	10.8	□□□□□ -0.68
RPSA-208	ENST00000487876	GRP	P07492	148 aa		10.8	□□□□□ -0.68
RPSA-208	ENST00000487876	RPS2	P15880	293 aa	Known RBP	10.8	□□□□□ -0.68
RPSA-208	ENST00000487876	ACKR3	P25106	362 aa		10.8	□□□□□ -0.68
RPSA-208	ENST00000487876	CD80	P33681	288 aa		10.8	□□□□□ -0.68
RPSA-208	ENST00000487876	THBS2	P35442	1172 aa		10.8	□□□□□ -0.68
RPSA-208	ENST00000487876	KRTAP24-1	Q3LI83	254 aa		10.8	□□□□□ -0.68
RPSA-208	ENST00000487876	ZNF404	Q494X3	552 aa		10.8	□□□□□ -0.68
RPSA-208	ENST00000487876	LCN1P1	Q5VSP4	162 aa		10.8	□□□□□ -0.68
RPSA-208	ENST00000487876	ZNF826P	Q6ZT77	177 aa		10.8	□□□□□ -0.68
RPSA-208	ENST00000487876	MEPCE	Q7L2J0	689 aa	Known RBP	10.8	□□□□□ -0.68
RPSA-208	ENST00000487876	KRT77	Q7Z794	578 aa		10.8	□□□□□ -0.68
RPSA-208	ENST00000487876	MUC20	Q8N307	709 aa	Predicted RBP	10.8	□□□□□ -0.68
RPSA-208	ENST00000487876	BOLL	Q8N9W6	283 aa	Known RBP	10.8	□□□□□ -0.68
RPSA-208	ENST00000487876	OR11L1	Q8NGX0	322 aa		10.8	□□□□□ -0.68
RPSA-208	ENST00000487876	TMEM163	Q8TC26	289 aa		10.8	□□□□□ -0.68
RPSA-208	ENST00000487876	CNN2	Q99439	309 aa	Known RBP	10.8	□□□□□ -0.68
RPSA-208	ENST00000487876	OSBPL10	Q9BXB5	764 aa		10.8	□□□□□ -0.68
RPSA-208	ENST00000487876	GABARAPL3	Q9BY60	117 aa		10.8	□□□□□ -0.68
RPSA-208	ENST00000487876	PRRG3	Q9BZD7	231 aa		10.8	□□□□□ -0.68
RPSA-208	ENST00000487876	FN3KRP	Q9HA64	309 aa		10.8	□□□□□ -0.68
RPSA-208	ENST00000487876	ADGRL4	Q9HBW9	690 aa		10.8	□□□□□ -0.68
RPSA-208	ENST00000487876	RHBDD3	Q9Y3P4	386 aa		10.8	□□□□□ -0.68
RPSA-208	ENST00000487876	TENM1	Q9UKZ4	2725 aa		10.8	□□□□□ -0.68
RPSA-208	ENST00000487876	PPIAL4E	A0A075B759	164 aa		10.79	□□□□□ -0.68
RPSA-208	ENST00000487876	ANKRD30BL	A7E2S9	258 aa		10.79	□□□□□ -0.68
RPSA-208	ENST00000487876		A8MXK9	166 aa		10.79	□□□□□ -0.68
RPSA-208	ENST00000487876	PPIAL4D	F5H284	164 aa		10.79	□□□□□ -0.68
RPSA-208	ENST00000487876	MAGEB4	O15481	346 aa	Predicted RBP	10.79	□□□□□ -0.68
RPSA-208	ENST00000487876	FOXH1	O75593	365 aa		10.79	□□□□□ -0.68
RPSA-208	ENST00000487876	RGS9	O75916	674 aa	Predicted RBP	10.79	□□□□□ -0.68
RPSA-208	ENST00000487876	WNT2	P09544	360 aa		10.79	□□□□□ -0.68
RPSA-208	ENST00000487876	PPIAL4F	P0DN26	164 aa		10.79	□□□□□ -0.68
RPSA-208	ENST00000487876	IRF2	P14316	349 aa		10.79	□□□□□ -0.68
RPSA-208	ENST00000487876	MFGE8	Q08431	387 aa	Predicted RBP	10.79	□□□□□ -0.68
RPSA-208	ENST00000487876	OR8B8	Q15620	311 aa		10.79	□□□□□ -0.68
RPSA-208	ENST00000487876	NXNL2	Q5VZ03	156 aa		10.79	□□□□□ -0.68
RPSA-208	ENST00000487876	SFRP4	Q6FHJ7	346 aa	Predicted RBP	10.79	□□□□□ -0.68
RPSA-208	ENST00000487876	LYPD2	Q6UXB3	125 aa		10.79	□□□□□ -0.68
RPSA-208	ENST00000487876	PLEKHG7	Q6ZR37	379 aa		10.79	□□□□□ -0.68
RPSA-208	ENST00000487876	KLB	Q86Z14	1044 aa		10.79	□□□□□ -0.68
RPSA-208	ENST00000487876	C1orf87	Q8N0U7	546 aa		10.79	□□□□□ -0.68
RPSA-208	ENST00000487876	DEFB108B	Q8NET1	73 aa		10.79	□□□□□ -0.68
RPSA-208	ENST00000487876	ERGIC1	Q969X5	290 aa		10.79	□□□□□ -0.68
RPSA-208	ENST00000487876	SP140L	Q9H930	580 aa		10.79	□□□□□ -0.68
RPSA-208	ENST00000487876	C1orf123	Q9NWV4	160 aa		10.79	□□□□□ -0.68
RPSA-208	ENST00000487876	FAM206A	Q9NX38	181 aa		10.79	□□□□□ -0.68
RPSA-208	ENST00000487876	NOP16	Q9Y3C1	178 aa	Known RBP	10.79	□□□□□ -0.68
RPSA-208	ENST00000487876	PPIAL4A	Q9Y536	164 aa		10.79	□□□□□ -0.68
RPSA-208	ENST00000487876	ANK2	Q01484	3957 aa		10.79	□□□□□ -0.68
RPSA-208	ENST00000487876	SLC22A31	A6NKX4	558 aa		10.78	□□□□□ -0.68
RPSA-208	ENST00000487876		A6NLC8	198 aa		10.78	□□□□□ -0.68
RPSA-208	ENST00000487876	C3orf80	F5H4A9	247 aa		10.78	□□□□□ -0.68
RPSA-208	ENST00000487876		J3QLI3	93 aa		10.78	□□□□□ -0.68
RPSA-208	ENST00000487876	EI24	O14681	340 aa		10.78	□□□□□ -0.68
RPSA-208	ENST00000487876	APOL3	O95236	402 aa		10.78	□□□□□ -0.68
RPSA-208	ENST00000487876	EGR1	P18146	543 aa		10.78	□□□□□ -0.68
RPSA-208	ENST00000487876	DDOST	P39656	456 aa		10.78	□□□□□ -0.68
RPSA-208	ENST00000487876	CSNK2B	P67870	215 aa		10.78	□□□□□ -0.68
RPSA-208	ENST00000487876	ROM1	Q03395	351 aa		10.78	□□□□□ -0.68
RPSA-208	ENST00000487876	ESCO2	Q56NI9	601 aa		10.78	□□□□□ -0.68
RPSA-208	ENST00000487876	KCTD18	Q6PI47	426 aa	Predicted RBP	10.78	□□□□□ -0.68
RPSA-208	ENST00000487876	C1QL2	Q7Z5L3	287 aa		10.78	□□□□□ -0.68
RPSA-208	ENST00000487876	SLC35F2	Q8IXU6	374 aa		10.78	□□□□□ -0.68
RPSA-208	ENST00000487876	OR8S1	Q8NH09	359 aa		10.78	□□□□□ -0.68
RPSA-208	ENST00000487876	OR8B4	Q96RC9	309 aa		10.78	□□□□□ -0.68
RPSA-208	ENST00000487876	RBM4B	Q9BQ04	359 aa	Known RBP	10.78	□□□□□ -0.68
RPSA-208	ENST00000487876	PAPOLG	Q9BWT3	736 aa	Known RBP	10.78	□□□□□ -0.68
RPSA-208	ENST00000487876	SSBP3	Q9BWW4	388 aa	Predicted RBP	10.78	□□□□□ -0.68
RPSA-208	ENST00000487876	FGF23	Q9GZV9	251 aa	Predicted RBP	10.78	□□□□□ -0.68
RPSA-208	ENST00000487876	C7orf69	Q9H7B7	122 aa		10.78	□□□□□ -0.68
RPSA-208	ENST00000487876	NIPAL2	Q9H841	368 aa		10.78	□□□□□ -0.68
RPSA-208	ENST00000487876	RNF7	Q9UBF6	113 aa		10.78	□□□□□ -0.68
RPSA-208	ENST00000487876	ENOPH1	Q9UHY7	261 aa		10.78	□□□□□ -0.68
RPSA-208	ENST00000487876	LRCH1	Q9Y2L9	728 aa		10.78	□□□□□ -0.68
RPSA-208	ENST00000487876	POLR3K	Q9Y2Y1	108 aa	Predicted RBP	10.78	□□□□□ -0.68
RPSA-208	ENST00000487876	PPIAL4C	A0A0B4J2A2	164 aa		10.77	□□□□□ -0.69
RPSA-208	ENST00000487876	KIR2DP1	A0A0G2JNF4	349 aa	Predicted RBP	10.77	□□□□□ -0.69
RPSA-208	ENST00000487876	TMEM269	A0A1B0GVZ9	245 aa		10.77	□□□□□ -0.69
RPSA-208	ENST00000487876	hCG_1807616	A0A1W2PRN6	198 aa		10.77	□□□□□ -0.69
RPSA-208	ENST00000487876	ZNF850	A8MQ14	1090 aa		10.77	□□□□□ -0.69
RPSA-208	ENST00000487876	EBAG9	O00559	213 aa		10.77	□□□□□ -0.69
RPSA-208	ENST00000487876	FSTL3	O95633	263 aa		10.77	□□□□□ -0.69
RPSA-208	ENST00000487876	ALPL	P05186	524 aa		10.77	□□□□□ -0.69
RPSA-208	ENST00000487876	ZNF12	P17014	697 aa		10.77	□□□□□ -0.69
RPSA-208	ENST00000487876	CFL1	P23528	166 aa	Known RBP	10.77	□□□□□ -0.69
RPSA-208	ENST00000487876	GATA3	P23771	443 aa		10.77	□□□□□ -0.69
RPSA-208	ENST00000487876	PITPNB	P48739	271 aa		10.77	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 153 ms