RNA–Protein interactions for RNA: ENST00000487172.1

PCOLCE-208, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-208ENST00000487172 SLC22A4Q9H015 551 aa16.51■□□□□ 0.23
PCOLCE-208ENST00000487172 MSL2Q9HCI7 577 aa16.51■□□□□ 0.23
PCOLCE-208ENST00000487172 TMEM100Q9NV29 134 aa16.51■□□□□ 0.23
PCOLCE-208ENST00000487172 MRPL15Q9P015 296 aaKnown RBP16.51■□□□□ 0.23
PCOLCE-208ENST00000487172 ZSCAN5BA6NJL1 495 aa16.5■□□□□ 0.23
PCOLCE-208ENST00000487172 OR4C45A6NMZ5 311 aa16.5■□□□□ 0.23
PCOLCE-208ENST00000487172 E9PI62 339 aa16.5■□□□□ 0.23
PCOLCE-208ENST00000487172 MYL12BO14950 172 aa16.5■□□□□ 0.23
PCOLCE-208ENST00000487172 MTRF1O75570 445 aaKnown RBP16.5■□□□□ 0.23
PCOLCE-208ENST00000487172 DHRS3O75911 302 aa16.5■□□□□ 0.23
PCOLCE-208ENST00000487172 F12P00748 615 aaPredicted RBP16.5■□□□□ 0.23
PCOLCE-208ENST00000487172 ISG15P05161 165 aa16.5■□□□□ 0.23
PCOLCE-208ENST00000487172 ERCC1P07992 297 aaPredicted RBP16.5■□□□□ 0.23
PCOLCE-208ENST00000487172 RPSAP08865 295 aaKnown RBP16.5■□□□□ 0.23
PCOLCE-208ENST00000487172 MAP2K3P46734 347 aa16.5■□□□□ 0.23
PCOLCE-208ENST00000487172 EFNA4P52798 201 aa16.5■□□□□ 0.23
PCOLCE-208ENST00000487172 WNT4P56705 351 aa16.5■□□□□ 0.23
PCOLCE-208ENST00000487172 PRSS12P56730 875 aa16.5■□□□□ 0.23
PCOLCE-208ENST00000487172 FAM209AQ5JX71 171 aa16.5■□□□□ 0.23
PCOLCE-208ENST00000487172 ZBTB37Q5TC79 503 aa16.5■□□□□ 0.23
PCOLCE-208ENST00000487172 RPL22L1Q6P5R6 122 aaKnown RBP16.5■□□□□ 0.23
PCOLCE-208ENST00000487172 DOK3Q7L591 496 aa16.5■□□□□ 0.23
PCOLCE-208ENST00000487172 KLBQ86Z14 1044 aa16.5■□□□□ 0.23
PCOLCE-208ENST00000487172 RPS4Y2Q8TD47 263 aa16.5■□□□□ 0.23
PCOLCE-208ENST00000487172 SOX7Q9BT81 388 aa16.5■□□□□ 0.23
PCOLCE-208ENST00000487172 MND1Q9BWT6 205 aa16.5■□□□□ 0.23
PCOLCE-208ENST00000487172 BARX1Q9HBU1 254 aaPredicted RBP16.5■□□□□ 0.23
PCOLCE-208ENST00000487172 DHRS7CA6NNS2 312 aa16.49■□□□□ 0.23
PCOLCE-208ENST00000487172 CYSRT1A8MQ03 144 aa16.49■□□□□ 0.23
PCOLCE-208ENST00000487172 P2RY10O00398 339 aa16.49■□□□□ 0.23
PCOLCE-208ENST00000487172 OGG1O15527 345 aa16.49■□□□□ 0.23
PCOLCE-208ENST00000487172 LILRA1O75019 489 aa16.49■□□□□ 0.23
PCOLCE-208ENST00000487172 NDUFS7O75251 213 aa16.49■□□□□ 0.23
PCOLCE-208ENST00000487172 IGHV1-46P01743 117 aa16.49■□□□□ 0.23
PCOLCE-208ENST00000487172 CD55P08174 381 aa16.49■□□□□ 0.23
PCOLCE-208ENST00000487172 ATP5J2P56134 94 aa16.49■□□□□ 0.23
PCOLCE-208ENST00000487172 FTMTQ8N4E7 242 aa16.49■□□□□ 0.23
PCOLCE-208ENST00000487172 BHLHE23Q8NDY6 225 aa16.49■□□□□ 0.23
PCOLCE-208ENST00000487172 OR14K1Q8NGZ2 314 aa16.49■□□□□ 0.23
PCOLCE-208ENST00000487172 GTF3AQ92664 365 aaKnown RBP16.49■□□□□ 0.23
PCOLCE-208ENST00000487172 TPK1Q9H3S4 243 aa16.49■□□□□ 0.23
PCOLCE-208ENST00000487172 TRIM36Q9NQ86 728 aa16.49■□□□□ 0.23
PCOLCE-208ENST00000487172 NOP16Q9Y3C1 178 aaKnown RBP16.49■□□□□ 0.23
PCOLCE-208ENST00000487172 V9GYS6 101 aa16.49■□□□□ 0.23
PCOLCE-208ENST00000487172 TMEM212A6NML5 194 aa16.48■□□□□ 0.23
PCOLCE-208ENST00000487172 SPRY3O43610 288 aa16.48■□□□□ 0.23
PCOLCE-208ENST00000487172 LALBAP00709 142 aa16.48■□□□□ 0.23
PCOLCE-208ENST00000487172 IGHV4-39P01824 125 aa16.48■□□□□ 0.23
PCOLCE-208ENST00000487172 MT-ND2P03891 347 aa16.48■□□□□ 0.23
PCOLCE-208ENST00000487172 ZNF12P17014 697 aa16.48■□□□□ 0.23
PCOLCE-208ENST00000487172 EEF1B2P24534 225 aaKnown RBP16.48■□□□□ 0.23
PCOLCE-208ENST00000487172 ACKR3P25106 362 aa16.48■□□□□ 0.23
PCOLCE-208ENST00000487172 GTF2A1P52655 376 aaPredicted RBP16.48■□□□□ 0.23
PCOLCE-208ENST00000487172 TAS2R43P59537 309 aa16.48■□□□□ 0.23
PCOLCE-208ENST00000487172 ACSM1Q08AH1 577 aa16.48■□□□□ 0.23
PCOLCE-208ENST00000487172 RIPPLY1Q0D2K3 151 aa16.48■□□□□ 0.23
PCOLCE-208ENST00000487172 COMMD2Q86X83 199 aa16.48■□□□□ 0.23
PCOLCE-208ENST00000487172 SEMA6DQ8NFY4 1073 aa16.48■□□□□ 0.23
PCOLCE-208ENST00000487172 PERPQ96FX8 193 aa16.48■□□□□ 0.23
PCOLCE-208ENST00000487172 FAM71F1Q96KD3 344 aaPredicted RBP16.48■□□□□ 0.23
PCOLCE-208ENST00000487172 CXXC4Q9H2H0 198 aa16.48■□□□□ 0.23
PCOLCE-208ENST00000487172 LRCH1Q9Y2L9 728 aa16.48■□□□□ 0.23
PCOLCE-208ENST00000487172 USF3Q68DE3 2245 aa16.47■□□□□ 0.23
PCOLCE-208ENST00000487172 ITPR2Q14571 2701 aa16.47■□□□□ 0.23
PCOLCE-208ENST00000487172 TRBV2A0A0J9YWF9 115 aa16.47■□□□□ 0.23
PCOLCE-208ENST00000487172 A0A1B0GVI7 797 aa16.47■□□□□ 0.23
PCOLCE-208ENST00000487172 TRIM64A6NGJ6 449 aa16.47■□□□□ 0.23
PCOLCE-208ENST00000487172 ANKRD30BLA7E2S9 258 aa16.47■□□□□ 0.23
PCOLCE-208ENST00000487172 MLNRO43193 412 aa16.47■□□□□ 0.23
PCOLCE-208ENST00000487172 SYT7O43581 403 aa16.47■□□□□ 0.23
PCOLCE-208ENST00000487172 GMDSO60547 372 aa16.47■□□□□ 0.23
PCOLCE-208ENST00000487172 CST4P01036 141 aa16.47■□□□□ 0.23
PCOLCE-208ENST00000487172 ACHEP22303 614 aa16.47■□□□□ 0.23
PCOLCE-208ENST00000487172 TNFSF4P23510 183 aa16.47■□□□□ 0.23
PCOLCE-208ENST00000487172 MAGEB1P43366 347 aa16.47■□□□□ 0.23
PCOLCE-208ENST00000487172 BDH1Q02338 343 aa16.47■□□□□ 0.23
PCOLCE-208ENST00000487172 CDK5R1Q15078 307 aa16.47■□□□□ 0.23
PCOLCE-208ENST00000487172 XAF1Q6GPH4 301 aa16.47■□□□□ 0.23
PCOLCE-208ENST00000487172 PRSS57Q6UWY2 283 aa16.47■□□□□ 0.23
PCOLCE-208ENST00000487172 SPERTQ8NA61 448 aa16.47■□□□□ 0.23
PCOLCE-208ENST00000487172 OR2Z1Q8NG97 314 aa16.47■□□□□ 0.23
PCOLCE-208ENST00000487172 CCDC90BQ9GZT6 254 aa16.47■□□□□ 0.23
PCOLCE-208ENST00000487172 IL19Q9UHD0 177 aa16.47■□□□□ 0.23
PCOLCE-208ENST00000487172 LSM2Q9Y333 95 aaKnown RBP16.47■□□□□ 0.23
PCOLCE-208ENST00000487172 CHD3Q12873 2000 aaKnown RBP16.46■□□□□ 0.23
PCOLCE-208ENST00000487172 ZNF816-ZNF321PA0A0X1KG74 233 aa16.46■□□□□ 0.23
PCOLCE-208ENST00000487172 ZFPL1O95159 310 aa16.46■□□□□ 0.23
PCOLCE-208ENST00000487172 CA6P23280 308 aa16.46■□□□□ 0.23
PCOLCE-208ENST00000487172 SPHARQ15513 63 aa16.46■□□□□ 0.23
PCOLCE-208ENST00000487172 ODF4Q2M2E3 257 aa16.46■□□□□ 0.23
PCOLCE-208ENST00000487172 DMKNQ6E0U4 476 aaPredicted RBP16.46■□□□□ 0.23
PCOLCE-208ENST00000487172 RDH10Q8IZV5 341 aa16.46■□□□□ 0.23
PCOLCE-208ENST00000487172 OR5AK2Q8NH90 309 aa16.46■□□□□ 0.23
PCOLCE-208ENST00000487172 C10orf35Q96D05 121 aa16.46■□□□□ 0.23
PCOLCE-208ENST00000487172 SMIM19Q96E16 107 aa16.46■□□□□ 0.23
PCOLCE-208ENST00000487172 ELMOD3Q96FG2 381 aa16.46■□□□□ 0.23
PCOLCE-208ENST00000487172 EGLN1Q9GZT9 426 aa16.46■□□□□ 0.23
PCOLCE-208ENST00000487172 COMMD4Q9H0A8 199 aa16.46■□□□□ 0.23
PCOLCE-208ENST00000487172 ABCB9Q9NP78 766 aa16.46■□□□□ 0.23
PCOLCE-208ENST00000487172 DECR2Q9NUI1 292 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms