RNA–Protein interactions for RNA: ENST00000486991.1

NR1H3-223, Transcript of nuclear receptor subfamily 1 group H member 3, human

TSL 4

Gene NR1H3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1H3-223	ENST00000486991	ACOD1	A6NK06	481 aa		11.19	□□□□□ -0.62
NR1H3-223	ENST00000486991	LY6H	O94772	140 aa		11.19	□□□□□ -0.62
NR1H3-223	ENST00000486991	NGF	P01138	241 aa		11.19	□□□□□ -0.62
NR1H3-223	ENST00000486991	ANOS1	P23352	680 aa		11.19	□□□□□ -0.62
NR1H3-223	ENST00000486991	PSMB9	P28065	219 aa		11.19	□□□□□ -0.62
NR1H3-223	ENST00000486991	SERPINF1	P36955	418 aa		11.19	□□□□□ -0.62
NR1H3-223	ENST00000486991	RAD52	P43351	418 aa		11.19	□□□□□ -0.62
NR1H3-223	ENST00000486991	KIR3DL2	P43630	455 aa		11.19	□□□□□ -0.62
NR1H3-223	ENST00000486991	TGM4	P49221	684 aa		11.19	□□□□□ -0.62
NR1H3-223	ENST00000486991	UCP2	P55851	309 aa		11.19	□□□□□ -0.62
NR1H3-223	ENST00000486991	TAS2R43	P59537	309 aa		11.19	□□□□□ -0.62
NR1H3-223	ENST00000486991	NANOS3	P60323	173 aa	Known RBP	11.19	□□□□□ -0.62
NR1H3-223	ENST00000486991	SNRPD2	P62316	118 aa	Known RBP	11.19	□□□□□ -0.62
NR1H3-223	ENST00000486991	SNTB2	Q13425	540 aa	Known RBP	11.19	□□□□□ -0.62
NR1H3-223	ENST00000486991	ALKBH1	Q13686	389 aa	Known RBP	11.19	□□□□□ -0.62
NR1H3-223	ENST00000486991	SWI5	Q1ZZU3	235 aa		11.19	□□□□□ -0.62
NR1H3-223	ENST00000486991	ODF4	Q2M2E3	257 aa		11.19	□□□□□ -0.62
NR1H3-223	ENST00000486991	SNAI3	Q3KNW1	292 aa		11.19	□□□□□ -0.62
NR1H3-223	ENST00000486991	CHRFAM7A	Q494W8	412 aa		11.19	□□□□□ -0.62
NR1H3-223	ENST00000486991	WDR38	Q5JTN6	314 aa		11.19	□□□□□ -0.62
NR1H3-223	ENST00000486991	XAF1	Q6GPH4	301 aa		11.19	□□□□□ -0.62
NR1H3-223	ENST00000486991	UNQ6126/PRO20091	Q6UXV3	157 aa		11.19	□□□□□ -0.62
NR1H3-223	ENST00000486991	PRSS35	Q8N3Z0	413 aa		11.19	□□□□□ -0.62
NR1H3-223	ENST00000486991	OR8B12	Q8NGG6	310 aa		11.19	□□□□□ -0.62
NR1H3-223	ENST00000486991	OR1J1	Q8NGS3	322 aa		11.19	□□□□□ -0.62
NR1H3-223	ENST00000486991	FCGR1B	Q92637	280 aa		11.19	□□□□□ -0.62
NR1H3-223	ENST00000486991	RNF166	Q96A37	237 aa	Predicted RBP	11.19	□□□□□ -0.62
NR1H3-223	ENST00000486991	MRPS26	Q9BYN8	205 aa	Known RBP	11.19	□□□□□ -0.62
NR1H3-223	ENST00000486991	OR10A2	Q9H208	303 aa		11.19	□□□□□ -0.62
NR1H3-223	ENST00000486991	G6PC2	Q9NQR9	355 aa		11.19	□□□□□ -0.62
NR1H3-223	ENST00000486991	TBCCD1	Q9NVR7	557 aa		11.19	□□□□□ -0.62
NR1H3-223	ENST00000486991	PTTG3P	Q9NZH4	202 aa		11.19	□□□□□ -0.62
NR1H3-223	ENST00000486991	FRRS1L	Q9P0K9	344 aa		11.19	□□□□□ -0.62
NR1H3-223	ENST00000486991	NUFIP1	Q9UHK0	495 aa	Known RBP	11.19	□□□□□ -0.62
NR1H3-223	ENST00000486991	TRBV2	A0A0J9YWF9	115 aa		11.18	□□□□□ -0.62
NR1H3-223	ENST00000486991		B9A039	149 aa		11.18	□□□□□ -0.62
NR1H3-223	ENST00000486991	INMT	O95050	263 aa		11.18	□□□□□ -0.62
NR1H3-223	ENST00000486991	IFNA2	P01563	188 aa		11.18	□□□□□ -0.62
NR1H3-223	ENST00000486991	ERCC1	P07992	297 aa	Predicted RBP	11.18	□□□□□ -0.62
NR1H3-223	ENST00000486991	SLC25A16	P16260	332 aa		11.18	□□□□□ -0.62
NR1H3-223	ENST00000486991	NR4A1	P22736	598 aa		11.18	□□□□□ -0.62
NR1H3-223	ENST00000486991	EFNA4	P52798	201 aa		11.18	□□□□□ -0.62
NR1H3-223	ENST00000486991	PPP1CB	P62140	327 aa		11.18	□□□□□ -0.62
NR1H3-223	ENST00000486991	BDH1	Q02338	343 aa		11.18	□□□□□ -0.62
NR1H3-223	ENST00000486991	SLC3A1	Q07837	685 aa		11.18	□□□□□ -0.62
NR1H3-223	ENST00000486991	MALL	Q13021	153 aa		11.18	□□□□□ -0.62
NR1H3-223	ENST00000486991	CDK5R1	Q15078	307 aa		11.18	□□□□□ -0.62
NR1H3-223	ENST00000486991	TIGD6	Q17RP2	521 aa		11.18	□□□□□ -0.62
NR1H3-223	ENST00000486991	TMEM249	Q2WGJ8	235 aa		11.18	□□□□□ -0.62
NR1H3-223	ENST00000486991	CCDC58	Q4VC31	144 aa		11.18	□□□□□ -0.62
NR1H3-223	ENST00000486991	SPATA46	Q5T0L3	261 aa		11.18	□□□□□ -0.62
NR1H3-223	ENST00000486991	UBE2U	Q5VVX9	321 aa		11.18	□□□□□ -0.62
NR1H3-223	ENST00000486991	FDX2	Q6P4F2	183 aa		11.18	□□□□□ -0.62
NR1H3-223	ENST00000486991	RPL22L1	Q6P5R6	122 aa	Known RBP	11.18	□□□□□ -0.62
NR1H3-223	ENST00000486991	VHLL	Q6RSH7	139 aa		11.18	□□□□□ -0.62
NR1H3-223	ENST00000486991	COLCA1	Q6ZS62	124 aa		11.18	□□□□□ -0.62
NR1H3-223	ENST00000486991	PRSS45	Q7RTY3	260 aa		11.18	□□□□□ -0.62
NR1H3-223	ENST00000486991	COMMD2	Q86X83	199 aa		11.18	□□□□□ -0.62
NR1H3-223	ENST00000486991	ZNF525	Q8N782	197 aa		11.18	□□□□□ -0.62
NR1H3-223	ENST00000486991	ZNF676	Q8N7Q3	588 aa		11.18	□□□□□ -0.62
NR1H3-223	ENST00000486991	NUP37	Q8NFH4	326 aa		11.18	□□□□□ -0.62
NR1H3-223	ENST00000486991	OR52H1	Q8NGJ2	320 aa		11.18	□□□□□ -0.62
NR1H3-223	ENST00000486991	OR5L1	Q8NGL2	311 aa		11.18	□□□□□ -0.62
NR1H3-223	ENST00000486991	OR2AE1	Q8NHA4	323 aa		11.18	□□□□□ -0.62
NR1H3-223	ENST00000486991	TMEM158	Q8WZ71	300 aa		11.18	□□□□□ -0.62
NR1H3-223	ENST00000486991	MGLL	Q99685	303 aa		11.18	□□□□□ -0.62
NR1H3-223	ENST00000486991	BCL2L14	Q9BZR8	327 aa		11.18	□□□□□ -0.62
NR1H3-223	ENST00000486991	POFUT1	Q9H488	388 aa		11.18	□□□□□ -0.62
NR1H3-223	ENST00000486991	MYOZ1	Q9NP98	299 aa	Predicted RBP	11.18	□□□□□ -0.62
NR1H3-223	ENST00000486991	CA10	Q9NS85	328 aa		11.18	□□□□□ -0.62
NR1H3-223	ENST00000486991	ZNF319	Q9P2F9	582 aa		11.18	□□□□□ -0.62
NR1H3-223	ENST00000486991	SIRT4	Q9Y6E7	314 aa	Predicted RBP	11.18	□□□□□ -0.62
NR1H3-223	ENST00000486991	TRIM64C	A6NLI5	447 aa		11.17	□□□□□ -0.62
NR1H3-223	ENST00000486991		H3BSH0	61 aa		11.17	□□□□□ -0.62
NR1H3-223	ENST00000486991		J3QW42	95 aa		11.17	□□□□□ -0.62
NR1H3-223	ENST00000486991	P2RY10	O00398	339 aa		11.17	□□□□□ -0.62
NR1H3-223	ENST00000486991	OGG1	O15527	345 aa		11.17	□□□□□ -0.62
NR1H3-223	ENST00000486991	XRCC2	O43543	280 aa		11.17	□□□□□ -0.62
NR1H3-223	ENST00000486991	ICMT	O60725	284 aa		11.17	□□□□□ -0.62
NR1H3-223	ENST00000486991	CLPTM1	O96005	669 aa		11.17	□□□□□ -0.62
NR1H3-223	ENST00000486991	TTR	P02766	147 aa		11.17	□□□□□ -0.62
NR1H3-223	ENST00000486991	CEL	P19835	753 aa		11.17	□□□□□ -0.62
NR1H3-223	ENST00000486991	CCR9	P51686	369 aa		11.17	□□□□□ -0.62
NR1H3-223	ENST00000486991	ERVS71-1	P61550	626 aa		11.17	□□□□□ -0.62
NR1H3-223	ENST00000486991	ACSM1	Q08AH1	577 aa		11.17	□□□□□ -0.62
NR1H3-223	ENST00000486991	MLLT11	Q13015	90 aa	Predicted RBP	11.17	□□□□□ -0.62
NR1H3-223	ENST00000486991	ADIPOQ	Q15848	244 aa		11.17	□□□□□ -0.62
NR1H3-223	ENST00000486991	TST	Q16762	297 aa	Known RBP	11.17	□□□□□ -0.62
NR1H3-223	ENST00000486991	MSMP	Q1L6U9	139 aa		11.17	□□□□□ -0.62
NR1H3-223	ENST00000486991	ARMCX4	Q5H9R4	360 aa		11.17	□□□□□ -0.62
NR1H3-223	ENST00000486991	GLYATL3	Q5SZD4	288 aa		11.17	□□□□□ -0.62
NR1H3-223	ENST00000486991	IL17REL	Q6ZVW7	336 aa		11.17	□□□□□ -0.62
NR1H3-223	ENST00000486991	ELMOD2	Q8IZ81	293 aa		11.17	□□□□□ -0.62
NR1H3-223	ENST00000486991	SLC25A40	Q8TBP6	338 aa		11.17	□□□□□ -0.62
NR1H3-223	ENST00000486991	OR51E1	Q8TCB6	317 aa		11.17	□□□□□ -0.62
NR1H3-223	ENST00000486991	FAM168A	Q92567	244 aa		11.17	□□□□□ -0.62
NR1H3-223	ENST00000486991	UFD1	Q92890	307 aa		11.17	□□□□□ -0.62
NR1H3-223	ENST00000486991	MUL1	Q969V5	352 aa		11.17	□□□□□ -0.62
NR1H3-223	ENST00000486991	REEP6	Q96HR9	211 aa		11.17	□□□□□ -0.62
NR1H3-223	ENST00000486991	COG8	Q96MW5	612 aa		11.17	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 101.4 ms